RNA–Protein interactions for RNA: ENST00000515006.5

COPB2-213, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-213ENST00000515006 FAM47AQ5JRC9 791 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 C9orf131Q5VYM1 1079 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 ATL3Q6DD88 541 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 SMYD5Q6GMV2 418 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 RCSD1Q6JBY9 416 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 TMEM179Q6ZVK1 233 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 USP50Q70EL3 339 aaPredicted RBP6.94□□□□□ -1.3
COPB2-213ENST00000515006 ENAHQ8N8S7 591 aaPredicted RBP6.94□□□□□ -1.3
COPB2-213ENST00000515006 NECAB1Q8N987 351 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 NUP133Q8WUM0 1156 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 ZKSCAN3Q9BRR0 538 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 LARP6Q9BRS8 491 aaKnown RBP6.94□□□□□ -1.3
COPB2-213ENST00000515006 SH2D4AQ9H788 454 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.94□□□□□ -1.3
COPB2-213ENST00000515006 DDX4Q9NQI0 724 aaKnown RBP6.94□□□□□ -1.3
COPB2-213ENST00000515006 INCENPQ9NQS7 918 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 MTMR4Q9NYA4 1195 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 NYAP2Q9P242 653 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 BRPF3Q9ULD4 1205 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 STX8Q9UNK0 236 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 DLEC1Q9Y238 1755 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 PITPNM2Q9BZ72 1349 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 NID2Q14112 1375 aa6.94□□□□□ -1.3
COPB2-213ENST00000515006 MAST2Q6P0Q8 1798 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 CLRN2A0PK11 232 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 DDTLA6NHG4 134 aaPredicted RBP6.93□□□□□ -1.3
COPB2-213ENST00000515006 MPHOSPH10O00566 681 aaKnown RBP6.93□□□□□ -1.3
COPB2-213ENST00000515006 DEXIO95424 95 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 BRD1O95696 1058 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 ASNSP08243 561 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 NCLP19338 710 aaKnown RBP6.93□□□□□ -1.3
COPB2-213ENST00000515006 SYT1P21579 422 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 NOVP48745 357 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 TROAPQ12815 778 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 RASA3Q14644 834 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 SAFBQ15424 915 aaKnown RBP eCLIP6.93□□□□□ -1.3
COPB2-213ENST00000515006 ABCB5Q2M3G0 1257 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 NBPF9Q3BBW0 867 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 GPATCH4Q5T3I0 446 aaKnown RBP6.93□□□□□ -1.3
COPB2-213ENST00000515006 CLEC17AQ6ZS10 378 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 PNMA8AQ86V59 439 aaPredicted RBP6.93□□□□□ -1.3
COPB2-213ENST00000515006 MICU3Q86XE3 530 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 PNMA1Q8ND90 353 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 NSUN7Q8NE18 718 aaKnown RBP6.93□□□□□ -1.3
COPB2-213ENST00000515006 MKL1Q969V6 931 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 DCPSQ96C86 337 aaKnown RBP6.93□□□□□ -1.3
COPB2-213ENST00000515006 RNF26Q9BY78 433 aaPredicted RBP6.93□□□□□ -1.3
COPB2-213ENST00000515006 ORC3Q9UBD5 711 aaPredicted RBP6.93□□□□□ -1.3
COPB2-213ENST00000515006 HPS5Q9UPZ3 1129 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 STK36Q9NRP7 1315 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 PLIN4Q96Q06 1357 aa6.93□□□□□ -1.3
COPB2-213ENST00000515006 PTPDC1A2A3K4 754 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 GLTPD2A6NH11 291 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 DDX11L8A8MPP1 907 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 PRPF3O43395 683 aaKnown RBP6.92□□□□□ -1.3
COPB2-213ENST00000515006 LARGE1O95461 756 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 FMNL1O95466 1100 aaPredicted RBP6.92□□□□□ -1.3
COPB2-213ENST00000515006 PARP1P09874 1014 aaKnown RBP6.92□□□□□ -1.3
COPB2-213ENST00000515006 ZSCAN22P10073 491 aaPredicted RBP6.92□□□□□ -1.3
COPB2-213ENST00000515006 YBX3P16989 372 aaKnown RBP eCLIP6.92□□□□□ -1.32e-7■■□□□ 13
COPB2-213ENST00000515006 SHMT1P34896 483 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 ADD1P35611 737 aaKnown RBP6.92□□□□□ -1.3
COPB2-213ENST00000515006 CACNB3P54284 484 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 SKOR2Q2VWA4 1001 aaPredicted RBP6.92□□□□□ -1.3
COPB2-213ENST00000515006 SLC4A8Q2Y0W8 1093 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 TBC1D10BQ4KMP7 808 aaPredicted RBP6.92□□□□□ -1.3
COPB2-213ENST00000515006 ASPRV1Q53RT3 343 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 SAMD7Q7Z3H4 446 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 CCDC12Q8WUD4 166 aaPredicted RBP6.92□□□□□ -1.3
COPB2-213ENST00000515006 L3MBTL3Q96JM7 780 aaPredicted RBP6.92□□□□□ -1.3
COPB2-213ENST00000515006 C8orf76Q96K31 380 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 TMEM47Q9BQJ4 181 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 DEFB129Q9H1M3 183 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 ARHGEF10LQ9HCE6 1279 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 BRMS1Q9HCU9 246 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 IL17RBQ9NRM6 502 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 CLIP2Q9UDT6 1046 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 HACL1Q9UJ83 578 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 CFAP45Q9UL16 551 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 TACC3Q9Y6A5 838 aa6.92□□□□□ -1.3
COPB2-213ENST00000515006 IGKV6D-41A0A0C4DH26 115 aa6.91□□□□□ -1.3
COPB2-213ENST00000515006 VPS37CA5D8V6 355 aaPredicted RBP6.91□□□□□ -1.3
COPB2-213ENST00000515006 hCG_1984214I3L0E3 225 aa6.91□□□□□ -1.3
COPB2-213ENST00000515006 CTNND1O60716 968 aaKnown RBP6.91□□□□□ -1.3
COPB2-213ENST00000515006 DDNO94850 711 aaPredicted RBP6.91□□□□□ -1.3
COPB2-213ENST00000515006 NF2P35240 595 aa6.91□□□□□ -1.3
COPB2-213ENST00000515006 GNL2Q13823 731 aaKnown RBP6.91□□□□□ -1.3
COPB2-213ENST00000515006 GRM4Q14833 912 aa6.91□□□□□ -1.3
COPB2-213ENST00000515006 NTRK3Q16288 839 aa6.91□□□□□ -1.3
COPB2-213ENST00000515006 GALNT17Q6IS24 598 aa6.91□□□□□ -1.3
COPB2-213ENST00000515006 SH3BP5LQ7L8J4 393 aa6.91□□□□□ -1.3
COPB2-213ENST00000515006 BRAPQ7Z569 592 aa6.91□□□□□ -1.3
COPB2-213ENST00000515006 USP48Q86UV5 1035 aa6.91□□□□□ -1.3
COPB2-213ENST00000515006 TEX2Q8IWB9 1127 aa6.91□□□□□ -1.3
COPB2-213ENST00000515006 SULF1Q8IWU6 871 aa6.91□□□□□ -1.3
COPB2-213ENST00000515006 ZFPM1Q8IX07 1006 aa6.91□□□□□ -1.3
COPB2-213ENST00000515006 ZNF713Q8N859 430 aaPredicted RBP6.91□□□□□ -1.3
COPB2-213ENST00000515006 SLC44A5Q8NCS7 719 aa6.91□□□□□ -1.3
COPB2-213ENST00000515006 FBXO18Q8NFZ0 1043 aa6.91□□□□□ -1.3
COPB2-213ENST00000515006 TNPO1Q92973 898 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms