RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 CNMDO75829 334 aa17.69■□□□□ 0.42
SGCA-211ENST00000514934 POLR3DP05423 398 aaPredicted RBP17.69■□□□□ 0.42
SGCA-211ENST00000514934 HOXD10P28358 340 aa17.69■□□□□ 0.42
SGCA-211ENST00000514934 HERVK_113P62684 666 aa17.69■□□□□ 0.42
SGCA-211ENST00000514934 SEPT2Q15019 361 aa17.69■□□□□ 0.42
SGCA-211ENST00000514934 KIAA1755Q5JYT7 1200 aa17.69■□□□□ 0.42
SGCA-211ENST00000514934 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
SGCA-211ENST00000514934 OSBP2Q969R2 916 aa17.69■□□□□ 0.42
SGCA-211ENST00000514934 STRBPQ96SI9 672 aaKnown RBP17.69■□□□□ 0.42
SGCA-211ENST00000514934 TRIM34Q9BYJ4 488 aa17.69■□□□□ 0.42
SGCA-211ENST00000514934 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.69■□□□□ 0.42
SGCA-211ENST00000514934 TAOK2Q9UL54 1235 aa17.69■□□□□ 0.42
SGCA-211ENST00000514934 PABPC4Q13310 644 aaKnown RBP eCLIP17.68■□□□□ 0.42
SGCA-211ENST00000514934 PRPF38BQ5VTL8 546 aaKnown RBP17.68■□□□□ 0.42
SGCA-211ENST00000514934 USP17L2Q6R6M4 530 aa17.68■□□□□ 0.42
SGCA-211ENST00000514934 RAET1EQ8TD07 263 aa17.68■□□□□ 0.42
SGCA-211ENST00000514934 PXYLP1Q8TE99 480 aa17.68■□□□□ 0.42
SGCA-211ENST00000514934 TMOD4Q9NZQ9 345 aa17.68■□□□□ 0.42
SGCA-211ENST00000514934 TTC41PQ6P2S7 1318 aa17.68■□□□□ 0.42
SGCA-211ENST00000514934 ROBO3Q96MS0 1386 aa17.67■□□□□ 0.42
SGCA-211ENST00000514934 PLXNA1Q9UIW2 1896 aa17.67■□□□□ 0.42
SGCA-211ENST00000514934 GSG1L2A8MUP6 293 aa17.67■□□□□ 0.42
SGCA-211ENST00000514934 TNPO2O14787 897 aaKnown RBP17.67■□□□□ 0.42
SGCA-211ENST00000514934 MYCP01106 439 aaPredicted RBP17.67■□□□□ 0.42
SGCA-211ENST00000514934 ELNP15502 786 aa17.67■□□□□ 0.42
SGCA-211ENST00000514934 VCAM1P19320 739 aa17.67■□□□□ 0.42
SGCA-211ENST00000514934 Q3C1V9 767 aa17.67■□□□□ 0.42
SGCA-211ENST00000514934 CTR9Q6PD62 1173 aa17.67■□□□□ 0.42
SGCA-211ENST00000514934 C16orf86Q6ZW13 317 aa17.67■□□□□ 0.42
SGCA-211ENST00000514934 CLEC10AQ8IUN9 316 aa17.67■□□□□ 0.42
SGCA-211ENST00000514934 SLAIN1Q8ND83 568 aa17.67■□□□□ 0.42
SGCA-211ENST00000514934 USP6NLQ92738 828 aa17.67■□□□□ 0.42
SGCA-211ENST00000514934 EPB41L4AQ9HCS5 686 aaPredicted RBP17.67■□□□□ 0.42
SGCA-211ENST00000514934 USP17L12C9JPN9 530 aa17.66■□□□□ 0.42
SGCA-211ENST00000514934 USP17L21D6R901 530 aa17.66■□□□□ 0.42
SGCA-211ENST00000514934 ADCY3O60266 1144 aa17.66■□□□□ 0.42
SGCA-211ENST00000514934 CCL5P13501 91 aa17.66■□□□□ 0.42
SGCA-211ENST00000514934 AKR1B1P15121 316 aa17.66■□□□□ 0.42
SGCA-211ENST00000514934 HDAC1Q13547 482 aaPredicted RBP17.66■□□□□ 0.42
SGCA-211ENST00000514934 RAB3GAP1Q15042 981 aa17.66■□□□□ 0.42
SGCA-211ENST00000514934 LBX2Q6XYB7 198 aa17.66■□□□□ 0.42
SGCA-211ENST00000514934 CATSPERGQ6ZRH7 1159 aa17.66■□□□□ 0.42
SGCA-211ENST00000514934 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.66■□□□□ 0.42
SGCA-211ENST00000514934 SWAP70Q9UH65 585 aa17.66■□□□□ 0.42
SGCA-211ENST00000514934 M0R2C6 588 aa17.65■□□□□ 0.42
SGCA-211ENST00000514934 FOXP2O15409 715 aa17.65■□□□□ 0.42
SGCA-211ENST00000514934 CDK8P49336 464 aa17.65■□□□□ 0.42
SGCA-211ENST00000514934 IRX3P78415 501 aaPredicted RBP17.65■□□□□ 0.42
SGCA-211ENST00000514934 ZYXQ15942 572 aaKnown RBP17.65■□□□□ 0.42
SGCA-211ENST00000514934 APPBP2Q92624 585 aa17.65■□□□□ 0.42
SGCA-211ENST00000514934 YTHDC1Q96MU7 727 aaKnown RBP17.65■□□□□ 0.42
SGCA-211ENST00000514934 TMEM106CQ9BVX2 250 aa17.65■□□□□ 0.42
SGCA-211ENST00000514934 UNC93B1Q9H1C4 597 aa17.65■□□□□ 0.42
SGCA-211ENST00000514934 PORCNQ9H237 461 aa17.65■□□□□ 0.42
SGCA-211ENST00000514934 SLC4A4Q9Y6R1 1079 aa17.65■□□□□ 0.42
SGCA-211ENST00000514934 TRIOBPQ9H2D6 2365 aa17.64■□□□□ 0.41
SGCA-211ENST00000514934 RNF113AO15541 343 aaKnown RBP17.64■□□□□ 0.41
SGCA-211ENST00000514934 INHAP05111 366 aa17.64■□□□□ 0.41
SGCA-211ENST00000514934 GJB1P08034 283 aa17.64■□□□□ 0.41
SGCA-211ENST00000514934 GJA8P48165 433 aa17.64■□□□□ 0.41
SGCA-211ENST00000514934 ERVK-9P63128 1117 aa17.64■□□□□ 0.41
SGCA-211ENST00000514934 ERVK-24P63145 666 aa17.64■□□□□ 0.41
SGCA-211ENST00000514934 SBK1Q52WX2 424 aa17.64■□□□□ 0.41
SGCA-211ENST00000514934 ZSCAN25Q6NSZ9 544 aa17.64■□□□□ 0.41
SGCA-211ENST00000514934 TMEM179Q6ZVK1 233 aa17.64■□□□□ 0.41
SGCA-211ENST00000514934 PAK6Q9NQU5 681 aaPredicted RBP17.64■□□□□ 0.41
SGCA-211ENST00000514934 SPDYE16A6NNV3 312 aaPredicted RBP17.63■□□□□ 0.41
SGCA-211ENST00000514934 USP17L15C9J2P7 530 aa17.63■□□□□ 0.41
SGCA-211ENST00000514934 USP17L13C9JLJ4 530 aa17.63■□□□□ 0.41
SGCA-211ENST00000514934 USP17L11C9JVI0 530 aa17.63■□□□□ 0.41
SGCA-211ENST00000514934 USP17L18D6R9N7 530 aa17.63■□□□□ 0.41
SGCA-211ENST00000514934 USP17L22D6RA61 530 aa17.63■□□□□ 0.41
SGCA-211ENST00000514934 USP17L17D6RBQ6 530 aa17.63■□□□□ 0.41
SGCA-211ENST00000514934 USP17L19D6RCP7 530 aa17.63■□□□□ 0.41
SGCA-211ENST00000514934 USP17L20D6RJB6 530 aa17.63■□□□□ 0.41
SGCA-211ENST00000514934 USP14P54578 494 aa17.63■□□□□ 0.41
SGCA-211ENST00000514934 USP17L24Q0WX57 530 aa17.63■□□□□ 0.41
SGCA-211ENST00000514934 GPRC5AQ8NFJ5 357 aa17.63■□□□□ 0.41
SGCA-211ENST00000514934 SEC62Q99442 399 aaKnown RBP17.63■□□□□ 0.41
SGCA-211ENST00000514934 BTBD7Q9P203 1132 aa17.63■□□□□ 0.41
SGCA-211ENST00000514934 STAP2Q9UGK3 403 aa17.63■□□□□ 0.41
SGCA-211ENST00000514934 LAMA4Q16363 1823 aa17.63■□□□□ 0.41
SGCA-211ENST00000514934 GPAA1O43292 621 aa17.62■□□□□ 0.41
SGCA-211ENST00000514934 IGHA2P01877 340 aa17.62■□□□□ 0.41
SGCA-211ENST00000514934 MX1P20591 662 aa17.62■□□□□ 0.41
SGCA-211ENST00000514934 TRIM32Q13049 653 aa17.62■□□□□ 0.41
SGCA-211ENST00000514934 MORN1Q5T089 497 aa17.62■□□□□ 0.41
SGCA-211ENST00000514934 MAP3K21Q5TCX8 1036 aa17.62■□□□□ 0.41
SGCA-211ENST00000514934 GIMAP6Q6P9H5 292 aa17.62■□□□□ 0.41
SGCA-211ENST00000514934 COA7Q96BR5 231 aa17.62■□□□□ 0.41
SGCA-211ENST00000514934 GPATCH3Q96I76 525 aa17.62■□□□□ 0.41
SGCA-211ENST00000514934 FEZ1Q99689 392 aa17.62■□□□□ 0.41
SGCA-211ENST00000514934 RPAP3Q9H6T3 665 aaPredicted RBP17.62■□□□□ 0.41
SGCA-211ENST00000514934 CABP5Q9NP86 173 aa17.62■□□□□ 0.41
SGCA-211ENST00000514934 TMX2Q9Y320 296 aa17.62■□□□□ 0.41
SGCA-211ENST00000514934 SMCHD1A6NHR9 2005 aa17.62■□□□□ 0.41
SGCA-211ENST00000514934 GLRX3O76003 335 aaKnown RBP17.61■□□□□ 0.41
SGCA-211ENST00000514934 ZFYP08048 801 aaPredicted RBP17.61■□□□□ 0.41
SGCA-211ENST00000514934 ZMYM1Q5SVZ6 1142 aa17.61■□□□□ 0.41
SGCA-211ENST00000514934 GTF3C2Q8WUA4 911 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms