RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 ERVV-1B6SEH8 477 aa6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 KRT86O43790 486 aa6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 RHOXF2BP0C7M4 288 aa6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 NDUFA8P51970 172 aa6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 KRT83P78385 493 aa6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 CPSF1Q10570 1443 aaKnown RBP6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 PAK1Q13153 545 aa6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 NBPF10Q6P3W6 841 aaKnown RBP6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 NBPF15Q8N660 670 aa6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 VTI1AQ96AJ9 217 aa6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 DYNLL2Q96FJ2 89 aa6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 RHOXF2Q9BQY4 288 aa6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 SYNCQ9H7C4 482 aa6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 GJB4Q9NTQ9 266 aa6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 KIAA1468Q9P260 1216 aa6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 MADDQ8WXG6 1647 aa6.93□□□□□ -1.3
ATP2C1-222ENST00000514654 CLRN2A0PK11 232 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 COBLO75128 1261 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 USP17L8P0C7I0 530 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 TECP42680 631 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 BAG6P46379 1132 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 MTX1Q13505 466 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 NECTIN1Q15223 517 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 CCDC122Q5T0U0 273 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 SPICE1Q8N0Z3 855 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 PPP1R9BQ96SB3 815 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 XPO4Q9C0E2 1151 aaKnown RBP6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 ZSWIM5Q9P217 1185 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 XDHP47989 1333 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 CCDC172P0C7W6 258 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 SCG2P13521 617 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 CTR9Q6PD62 1173 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 CERS3Q8IU89 383 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 CNGA4Q8IV77 575 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 GINS2Q9Y248 185 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 MCM3P25205 808 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 CNNM4Q6P4Q7 775 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 KRT27Q7Z3Y8 459 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 LZTS2Q9BRK4 669 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 MED23Q9ULK4 1368 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 GBP2P32456 591 aaPredicted RBP6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 GTF2F1P35269 517 aaKnown RBP eCLIP6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 RNASE9P60153 205 aaKnown RBP6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 PTGDRQ13258 359 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 NR5A1Q13285 461 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 CUL4AQ13619 759 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 KIAA0753Q2KHM9 967 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 CERKLQ49MI3 558 aaPredicted RBP6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 USP37Q86T82 979 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 NELFBQ8WX92 580 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 FAM107BQ9H098 131 aa6.92□□□□□ -1.3
ATP2C1-222ENST00000514654 SPHKAPQ2M3C7 1700 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 ARHGEF35A5YM69 484 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 PPEF1O14829 653 aaPredicted RBP6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 SORBS3O60504 671 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 RPL13P26373 211 aaKnown RBP6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 KRT9P35527 623 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 LRMPQ12912 555 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 BMS1Q14692 1282 aaKnown RBP6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 HAUS3Q68CZ6 603 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 SUPT20HQ8NEM7 779 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 ZFP91Q96JP5 570 aaPredicted RBP6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 ARFGAP3Q9NP61 516 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 TMOD4Q9NZQ9 345 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 ABCA6Q8N139 1617 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 TULP4Q9NRJ4 1543 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 E9PCH4 1651 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 ADKP55263 362 aaKnown RBP6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 PTPN21Q16825 1174 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 TPH2Q8IWU9 490 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 SRRTQ9BXP5 876 aaKnown RBP6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 PSTPIP2Q9H939 334 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 ATP8A2Q9NTI2 1148 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 LEMD3Q9Y2U8 911 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 ADGRB3O60242 1522 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 SOS2Q07890 1332 aaPredicted RBP6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 POTEB2H3BUK9 544 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 EEF2P13639 858 aaKnown RBP6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 CDC25AP30304 524 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 ICA1Q05084 483 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 BIRC3Q13489 604 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 IFI16Q16666 785 aaKnown RBP6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 PRR16Q569H4 304 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 HOOK3Q86VS8 718 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 RDH13Q8NBN7 331 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 IMPG2Q9BZV3 1241 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 DNM3Q9UQ16 869 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 CETN3O15182 167 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 CHGBP05060 677 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 CMA1P23946 247 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 SLC16A2P36021 539 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 LMAN1P49257 510 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 MYCT1Q8N699 235 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 CELF1Q92879 486 aaKnown RBP6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 PGBD1Q96JS3 809 aa6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 NAP1L4Q99733 375 aaKnown RBP6.91□□□□□ -1.3
ATP2C1-222ENST00000514654 CARMIL3Q8ND23 1372 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 TMEM232C9JQI7 657 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 RAD17O75943 681 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms