RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 PABPC4Q13310 644 aaKnown RBP eCLIP14.78□□□□□ -0.04
COPB2-212ENST00000514508 SEPT2Q15019 361 aa14.78□□□□□ -0.04
COPB2-212ENST00000514508 ZNF589Q86UQ0 364 aaPredicted RBP14.78□□□□□ -0.04
COPB2-212ENST00000514508 ZMYM6O95789 1325 aa14.77□□□□□ -0.04
COPB2-212ENST00000514508 USP14P54578 494 aa14.77□□□□□ -0.05
COPB2-212ENST00000514508 PDE4BQ07343 736 aa14.77□□□□□ -0.05
COPB2-212ENST00000514508 USP17L2Q6R6M4 530 aa14.77□□□□□ -0.05
COPB2-212ENST00000514508 FEZ1Q99689 392 aa14.77□□□□□ -0.05
COPB2-212ENST00000514508 PNMA3Q9UL41 463 aa14.77□□□□□ -0.05
COPB2-212ENST00000514508 GREB1LQ9C091 1923 aaPredicted RBP14.76□□□□□ -0.05
COPB2-212ENST00000514508 FGAP02671 866 aa14.76□□□□□ -0.05
COPB2-212ENST00000514508 SP3Q02447 781 aa14.76□□□□□ -0.05
COPB2-212ENST00000514508 TREML2Q5T2D2 321 aa14.76□□□□□ -0.05
COPB2-212ENST00000514508 ZNF444Q8N0Y2 327 aaPredicted RBP14.76□□□□□ -0.05
COPB2-212ENST00000514508 STK11IPQ8N1F8 1099 aa14.76□□□□□ -0.05
COPB2-212ENST00000514508 ERO1AQ96HE7 468 aa14.76□□□□□ -0.05
COPB2-212ENST00000514508 C12orf42Q96LP6 360 aa14.76□□□□□ -0.05
COPB2-212ENST00000514508 KIAA1683Q9H0B3 1180 aa14.76□□□□□ -0.05
COPB2-212ENST00000514508 PPP4R2Q9NY27 417 aa14.76□□□□□ -0.05
COPB2-212ENST00000514508 RAD50Q92878 1312 aa14.75□□□□□ -0.05
COPB2-212ENST00000514508 CYP2C8P10632 490 aa14.75□□□□□ -0.05
COPB2-212ENST00000514508 RASA1P20936 1047 aa14.75□□□□□ -0.05
COPB2-212ENST00000514508 OSBPP22059 807 aa14.75□□□□□ -0.05
COPB2-212ENST00000514508 HOXA7P31268 230 aaPredicted RBP14.75□□□□□ -0.05
COPB2-212ENST00000514508 ICA1Q05084 483 aa14.75□□□□□ -0.05
COPB2-212ENST00000514508 DGKZQ13574 1117 aa14.75□□□□□ -0.05
COPB2-212ENST00000514508 C17orf99Q6UX52 265 aa14.75□□□□□ -0.05
COPB2-212ENST00000514508 TNS4Q8IZW8 715 aa14.75□□□□□ -0.05
COPB2-212ENST00000514508 ACER1Q8TDN7 264 aa14.75□□□□□ -0.05
COPB2-212ENST00000514508 RUFY2Q8WXA3 655 aa14.75□□□□□ -0.05
COPB2-212ENST00000514508 SH2D4AQ9H788 454 aa14.75□□□□□ -0.05
COPB2-212ENST00000514508 KANSL2Q9H9L4 492 aa14.75□□□□□ -0.05
COPB2-212ENST00000514508 ARHGEF10LQ9HCE6 1279 aa14.75□□□□□ -0.05
COPB2-212ENST00000514508 EMILIN3Q9NT22 766 aa14.75□□□□□ -0.05
COPB2-212ENST00000514508 ANAPC4Q9UJX5 808 aa14.75□□□□□ -0.05
COPB2-212ENST00000514508 ADGRA2Q96PE1 1338 aa14.74□□□□□ -0.05
COPB2-212ENST00000514508 PRDM1O75626 825 aa14.74□□□□□ -0.05
COPB2-212ENST00000514508 CHMLP26374 656 aa14.74□□□□□ -0.05
COPB2-212ENST00000514508 BMP2KLQ5H9B9 411 aa14.74□□□□□ -0.05
COPB2-212ENST00000514508 CTU1Q7Z7A3 348 aaKnown RBP14.74□□□□□ -0.05
COPB2-212ENST00000514508 SMCR8Q8TEV9 937 aaPredicted RBP14.74□□□□□ -0.05
COPB2-212ENST00000514508 DSCC1Q9BVC3 393 aa14.74□□□□□ -0.05
COPB2-212ENST00000514508 A0A1W2PRG0 241 aa14.73□□□□□ -0.05
COPB2-212ENST00000514508 CTDSPL2Q05D32 466 aa14.73□□□□□ -0.05
COPB2-212ENST00000514508 ARHGEF6Q15052 776 aa14.73□□□□□ -0.05
COPB2-212ENST00000514508 ZYXQ15942 572 aaKnown RBP14.73□□□□□ -0.05
COPB2-212ENST00000514508 CPA4Q9UI42 421 aa14.73□□□□□ -0.05
COPB2-212ENST00000514508 TMX2Q9Y320 296 aa14.73□□□□□ -0.05
COPB2-212ENST00000514508 LAMA4Q16363 1823 aa14.73□□□□□ -0.05
COPB2-212ENST00000514508 MYH4Q9Y623 1939 aa14.72□□□□□ -0.05
COPB2-212ENST00000514508 FGRP09769 529 aa14.72□□□□□ -0.05
COPB2-212ENST00000514508 TSPY3P0CV98 308 aa14.72□□□□□ -0.05
COPB2-212ENST00000514508 TSPY8P0CW00 308 aa14.72□□□□□ -0.05
COPB2-212ENST00000514508 BCRP11274 1271 aa14.72□□□□□ -0.05
COPB2-212ENST00000514508 EEF2P13639 858 aaKnown RBP14.72□□□□□ -0.05
COPB2-212ENST00000514508 GCLCP48506 637 aaPredicted RBP14.72□□□□□ -0.05
COPB2-212ENST00000514508 IRX3P78415 501 aaPredicted RBP14.72□□□□□ -0.05
COPB2-212ENST00000514508 KIF22Q14807 665 aa14.72□□□□□ -0.05
COPB2-212ENST00000514508 PKN2Q16513 984 aaKnown RBP14.72□□□□□ -0.05
COPB2-212ENST00000514508 SKAP1Q86WV1 359 aa14.72□□□□□ -0.05
COPB2-212ENST00000514508 CLEC10AQ8IUN9 316 aa14.72□□□□□ -0.05
COPB2-212ENST00000514508 SIAH1Q8IUQ4 282 aa14.72□□□□□ -0.05
COPB2-212ENST00000514508 NEDD1Q8NHV4 660 aa14.72□□□□□ -0.05
COPB2-212ENST00000514508 CD99L2Q8TCZ2 262 aa14.72□□□□□ -0.05
COPB2-212ENST00000514508 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.72□□□□□ -0.05
COPB2-212ENST00000514508 ASCC2Q9H1I8 757 aaPredicted RBP14.72□□□□□ -0.05
COPB2-212ENST00000514508 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.72□□□□□ -0.05
COPB2-212ENST00000514508 PLIN4Q96Q06 1357 aa14.72□□□□□ -0.05
COPB2-212ENST00000514508 USP17L15C9J2P7 530 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 USP17L13C9JLJ4 530 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 USP17L11C9JVI0 530 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 USP17L18D6R9N7 530 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 USP17L22D6RA61 530 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 USP17L17D6RBQ6 530 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 USP17L19D6RCP7 530 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 USP17L20D6RJB6 530 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 ZNF213O14771 459 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 ORC4O43929 436 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 PCP11498 1178 aaKnown RBP14.71□□□□□ -0.05
COPB2-212ENST00000514508 VCAM1P19320 739 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 LACTBP83111 547 aaPredicted RBP14.71□□□□□ -0.05
COPB2-212ENST00000514508 TFAP4Q01664 338 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 ATP2B2Q01814 1243 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 USP17L24Q0WX57 530 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 LPAR1Q92633 364 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 MCOLN1Q9GZU1 580 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 IL25Q9H293 177 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 NYAP2Q9P242 653 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 CTNNA3Q9UI47 895 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 MGAMO43451 1857 aa14.71□□□□□ -0.05
COPB2-212ENST00000514508 IGKV6D-41A0A0C4DH26 115 aa14.7□□□□□ -0.06
COPB2-212ENST00000514508 SGSM2O43147 1006 aa14.7□□□□□ -0.06
COPB2-212ENST00000514508 HAND2P61296 217 aa14.7□□□□□ -0.06
COPB2-212ENST00000514508 PPP4R3BQ5MIZ7 849 aa14.7□□□□□ -0.06
COPB2-212ENST00000514508 GTF3C2Q8WUA4 911 aaPredicted RBP14.7□□□□□ -0.06
COPB2-212ENST00000514508 P2RX7Q99572 595 aaKnown RBP14.7□□□□□ -0.06
COPB2-212ENST00000514508 RNF41Q9H4P4 317 aaPredicted RBP14.7□□□□□ -0.06
COPB2-212ENST00000514508 VCPKMTQ9H867 229 aa14.7□□□□□ -0.06
COPB2-212ENST00000514508 EFCC1Q9HA90 598 aa14.7□□□□□ -0.06
COPB2-212ENST00000514508 GOPCQ9HD26 462 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms