RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 ETF1P62495 437 aaKnown RBP6.55□□□□□ -1.36
CLDND1-228ENST00000513873 CYP27A1Q02318 531 aa6.55□□□□□ -1.36
CLDND1-228ENST00000513873 DUSP27Q5VZP5 1158 aa6.55□□□□□ -1.36
CLDND1-228ENST00000513873 PLPPR2Q96GM1 343 aa6.55□□□□□ -1.36
CLDND1-228ENST00000513873 MFSD14AQ96MC6 490 aa6.55□□□□□ -1.36
CLDND1-228ENST00000513873 PCDHGC5Q9Y5F6 944 aa6.55□□□□□ -1.36
CLDND1-228ENST00000513873 FRMPD1Q5SYB0 1578 aa6.55□□□□□ -1.36
CLDND1-228ENST00000513873 ARHGEF40Q8TER5 1519 aa6.55□□□□□ -1.36
CLDND1-228ENST00000513873 RBM25P49756 843 aaKnown RBP6.54□□□□□ -1.36
CLDND1-228ENST00000513873 FAM160A1Q05DH4 1040 aa6.54□□□□□ -1.36
CLDND1-228ENST00000513873 PDE4BQ07343 736 aa6.54□□□□□ -1.36
CLDND1-228ENST00000513873 INPP5AQ14642 412 aa6.54□□□□□ -1.36
CLDND1-228ENST00000513873 LRFN4Q6PJG9 635 aa6.54□□□□□ -1.36
CLDND1-228ENST00000513873 ABI1Q8IZP0 508 aa6.54□□□□□ -1.36
CLDND1-228ENST00000513873 OSBPL1AQ9BXW6 950 aa6.54□□□□□ -1.36
CLDND1-228ENST00000513873 ABCA9Q8IUA7 1624 aa6.54□□□□□ -1.36
CLDND1-228ENST00000513873 ARHGAP35Q9NRY4 1499 aa6.53□□□□□ -1.36
CLDND1-228ENST00000513873 UHRF1BP1Q6BDS2 1440 aa6.53□□□□□ -1.36
CLDND1-228ENST00000513873 DBX1A6NMT0 343 aa6.53□□□□□ -1.36
CLDND1-228ENST00000513873 WDR64B1ANS9 1081 aa6.53□□□□□ -1.36
CLDND1-228ENST00000513873 JUNBP17275 347 aaPredicted RBP6.53□□□□□ -1.36
CLDND1-228ENST00000513873 EIF4A3P38919 411 aaKnown RBP6.53□□□□□ -1.36
CLDND1-228ENST00000513873 RPL6Q02878 288 aaKnown RBP6.53□□□□□ -1.36
CLDND1-228ENST00000513873 PTPN11Q06124 597 aaPredicted RBP6.53□□□□□ -1.36
CLDND1-228ENST00000513873 ZBTB37Q5TC79 503 aa6.53□□□□□ -1.36
CLDND1-228ENST00000513873 ERMP1Q7Z2K6 904 aa6.53□□□□□ -1.36
CLDND1-228ENST00000513873 GOLM1Q8NBJ4 401 aa6.53□□□□□ -1.36
CLDND1-228ENST00000513873 GAL3ST3Q96A11 431 aa6.53□□□□□ -1.36
CLDND1-228ENST00000513873 ISL2Q96A47 359 aa6.53□□□□□ -1.36
CLDND1-228ENST00000513873 METTL22Q9BUU2 404 aaPredicted RBP6.53□□□□□ -1.36
CLDND1-228ENST00000513873 PRKAG2Q9UGJ0 569 aa6.53□□□□□ -1.36
CLDND1-228ENST00000513873 CDK11AQ9UQ88 783 aaPredicted RBP6.53□□□□□ -1.36
CLDND1-228ENST00000513873 SUPT16HQ9Y5B9 1047 aaKnown RBP6.53□□□□□ -1.36
CLDND1-228ENST00000513873 TACC3Q9Y6A5 838 aa6.53□□□□□ -1.36
CLDND1-228ENST00000513873 UGGT2Q9NYU1 1516 aa6.53□□□□□ -1.36
CLDND1-228ENST00000513873 RICTORQ6R327 1708 aa6.53□□□□□ -1.36
CLDND1-228ENST00000513873 AKNAQ7Z591 1439 aa6.52□□□□□ -1.37
CLDND1-228ENST00000513873 MAP3K1Q13233 1512 aa6.52□□□□□ -1.37
CLDND1-228ENST00000513873 PKN1Q16512 942 aa6.52□□□□□ -1.37
CLDND1-228ENST00000513873 CYP27C1Q4G0S4 372 aa6.52□□□□□ -1.37
CLDND1-228ENST00000513873 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.52□□□□□ -1.37
CLDND1-228ENST00000513873 BNC2Q6ZN30 1099 aaPredicted RBP6.52□□□□□ -1.37
CLDND1-228ENST00000513873 CYFIP1Q7L576 1253 aa6.52□□□□□ -1.37
CLDND1-228ENST00000513873 USP48Q86UV5 1035 aa6.52□□□□□ -1.37
CLDND1-228ENST00000513873 SHKBP1Q8TBC3 707 aa6.52□□□□□ -1.37
CLDND1-228ENST00000513873 GATAD2BQ8WXI9 593 aa6.52□□□□□ -1.37
CLDND1-228ENST00000513873 COPRSQ9NQ92 184 aa6.52□□□□□ -1.37
CLDND1-228ENST00000513873 LEMD3Q9Y2U8 911 aa6.52□□□□□ -1.37
CLDND1-228ENST00000513873 KIAA0556O60303 1618 aa6.51□□□□□ -1.37
CLDND1-228ENST00000513873 SIGLEC1Q9BZZ2 1709 aa6.51□□□□□ -1.37
CLDND1-228ENST00000513873 HSPA1LP34931 641 aa6.51□□□□□ -1.37
CLDND1-228ENST00000513873 MLECQ14165 292 aa6.51□□□□□ -1.37
CLDND1-228ENST00000513873 CPSF6Q16630 551 aaKnown RBP eCLIP6.51□□□□□ -1.37
CLDND1-228ENST00000513873 CWF19L2Q2TBE0 894 aaKnown RBP6.51□□□□□ -1.37
CLDND1-228ENST00000513873 ZAR1Q86SH2 424 aa6.51□□□□□ -1.37
CLDND1-228ENST00000513873 HID1Q8IV36 788 aa6.51□□□□□ -1.37
CLDND1-228ENST00000513873 WNT10AQ9GZT5 417 aa6.51□□□□□ -1.37
CLDND1-228ENST00000513873 ROBO2Q9HCK4 1378 aa6.51□□□□□ -1.37
CLDND1-228ENST00000513873 CASKIN1Q8WXD9 1431 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 ABCA8O94911 1581 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 E9PSI1 815 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 CILPO75339 1184 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 RECKO95980 971 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 F13A1P00488 732 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 PGRP06401 933 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 NEFMP07197 916 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 FANCCQ00597 558 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 RING1Q06587 406 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 OGFOD3Q6PK18 319 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 ARHGAP27Q6ZUM4 889 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 ZNF296Q8WUU4 475 aaPredicted RBP6.5□□□□□ -1.37
CLDND1-228ENST00000513873 RHOVQ96L33 236 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 KRTAP17-1Q9BYP8 105 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 ARHGEF12Q9NZN5 1544 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 FHOD3Q2V2M9 1422 aa6.5□□□□□ -1.37
CLDND1-228ENST00000513873 DENND4BO75064 1496 aaPredicted RBP6.49□□□□□ -1.37
CLDND1-228ENST00000513873 MAGI2Q86UL8 1455 aa6.49□□□□□ -1.37
CLDND1-228ENST00000513873 FYCO1Q9BQS8 1478 aa6.49□□□□□ -1.37
CLDND1-228ENST00000513873 PRR19A6NJB7 356 aa6.49□□□□□ -1.37
CLDND1-228ENST00000513873 UNCXA6NJT0 531 aa6.49□□□□□ -1.37
CLDND1-228ENST00000513873 GFRA2O00451 464 aa6.49□□□□□ -1.37
CLDND1-228ENST00000513873 GRK4P32298 578 aa6.49□□□□□ -1.37
CLDND1-228ENST00000513873 CEBPAP49715 358 aaPredicted RBP6.49□□□□□ -1.37
CLDND1-228ENST00000513873 CDK5R2Q13319 367 aa6.49□□□□□ -1.37
CLDND1-228ENST00000513873 MPP2Q14168 576 aa6.49□□□□□ -1.37
CLDND1-228ENST00000513873 FAM196AQ6ZSG2 479 aa6.49□□□□□ -1.37
CLDND1-228ENST00000513873 KIAA0825Q8IV33 1275 aa6.49□□□□□ -1.37
CLDND1-228ENST00000513873 ZNF654Q8IZM8 581 aa6.49□□□□□ -1.37
CLDND1-228ENST00000513873 SPON2Q9BUD6 331 aa6.49□□□□□ -1.37
CLDND1-228ENST00000513873 KIAA1522Q9P206 1035 aaPredicted RBP6.49□□□□□ -1.37
CLDND1-228ENST00000513873 TLR3O15455 904 aaKnown RBP6.48□□□□□ -1.37
CLDND1-228ENST00000513873 DYNC1LI2O43237 492 aaPredicted RBP6.48□□□□□ -1.37
CLDND1-228ENST00000513873 F13BP05160 661 aa6.48□□□□□ -1.37
CLDND1-228ENST00000513873 FAM87AP0C7U9 286 aa6.48□□□□□ -1.37
CLDND1-228ENST00000513873 PLCG1P19174 1290 aa6.48□□□□□ -1.37
CLDND1-228ENST00000513873 CDK8P49336 464 aa6.48□□□□□ -1.37
CLDND1-228ENST00000513873 FBXL19Q6PCT2 694 aa6.48□□□□□ -1.37
CLDND1-228ENST00000513873 SPOCD1Q6ZMY3 1216 aa6.48□□□□□ -1.37
CLDND1-228ENST00000513873 FBXL18Q96ME1 805 aa6.48□□□□□ -1.37
CLDND1-228ENST00000513873 FOXQ1Q9C009 403 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms