RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 ACTL7BQ9Y614 415 aa5.78□□□□□ -1.48
GYPB-214ENST00000513557 F8W735 103 aaPredicted RBP5.77□□□□□ -1.49
GYPB-214ENST00000513557 SUSD5O60279 629 aa5.77□□□□□ -1.49
GYPB-214ENST00000513557 CST3P01034 146 aaPredicted RBP5.77□□□□□ -1.49
GYPB-214ENST00000513557 GBP1P32455 592 aa5.77□□□□□ -1.49
GYPB-214ENST00000513557 PMS1P54277 932 aaKnown RBP5.77□□□□□ -1.49
GYPB-214ENST00000513557 SQSTM1Q13501 440 aa5.77□□□□□ -1.49
GYPB-214ENST00000513557 RNF187Q5TA31 235 aaPredicted RBP5.77□□□□□ -1.49
GYPB-214ENST00000513557 UBE3DQ7Z6J8 389 aa5.77□□□□□ -1.49
GYPB-214ENST00000513557 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.77□□□□□ -1.49
GYPB-214ENST00000513557 SMYD4Q8IYR2 804 aaPredicted RBP5.77□□□□□ -1.49
GYPB-214ENST00000513557 TMEM130Q8N3G9 435 aa5.77□□□□□ -1.49
GYPB-214ENST00000513557 C2CD4AQ8NCU7 369 aaPredicted RBP5.77□□□□□ -1.49
GYPB-214ENST00000513557 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.77□□□□□ -1.49
GYPB-214ENST00000513557 EPN3Q9H201 632 aa5.77□□□□□ -1.49
GYPB-214ENST00000513557 SLKQ9H2G2 1235 aaPredicted RBP5.77□□□□□ -1.49
GYPB-214ENST00000513557 FAM105AQ9NUU6 356 aa5.77□□□□□ -1.49
GYPB-214ENST00000513557 TMEM260Q9NX78 707 aa5.77□□□□□ -1.49
GYPB-214ENST00000513557 SUCOQ9UBS9 1254 aaKnown RBP5.77□□□□□ -1.49
GYPB-214ENST00000513557 LEMD3Q9Y2U8 911 aa5.77□□□□□ -1.49
GYPB-214ENST00000513557 IQCA1LA6NCM1 817 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 CLEC3AO75596 197 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 UBOX5O94941 541 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 GRIK4Q16099 956 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 SLC10A6Q3KNW5 377 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 SHISA2Q6UWI4 295 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 TREML4Q6UXN2 200 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 ARMCX6Q7L4S7 300 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 PODNQ7Z5L7 613 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 TMEM192Q8IY95 271 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 JMYQ8N9B5 988 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 BAHD1Q8TBE0 780 aaPredicted RBP5.76□□□□□ -1.49
GYPB-214ENST00000513557 XAGE3Q8WTP9 111 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 ZNF775Q96BV0 537 aaPredicted RBP5.76□□□□□ -1.49
GYPB-214ENST00000513557 CEP41Q9BYV8 373 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 FOXQ1Q9C009 403 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 AKTIPQ9H8T0 292 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 FAM86C1Q9NVL1 165 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 USP21Q9UK80 565 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 PCOLCE2Q9UKZ9 415 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 PTCH2Q9Y6C5 1203 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 CECR2Q9BXF3 1484 aa5.76□□□□□ -1.49
GYPB-214ENST00000513557 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.75□□□□□ -1.49
GYPB-214ENST00000513557 AGRPO00253 132 aa5.75□□□□□ -1.49
GYPB-214ENST00000513557 SART1O43290 800 aaKnown RBP5.75□□□□□ -1.49
GYPB-214ENST00000513557 GAS2O43903 313 aaKnown RBP5.75□□□□□ -1.49
GYPB-214ENST00000513557 LRIG2O94898 1065 aa5.75□□□□□ -1.49
GYPB-214ENST00000513557 TP53P04637 393 aaPredicted RBP5.75□□□□□ -1.49
GYPB-214ENST00000513557 NAT2P11245 290 aa5.75□□□□□ -1.49
GYPB-214ENST00000513557 RAB6AP20340 208 aa5.75□□□□□ -1.49
GYPB-214ENST00000513557 PREPP48147 710 aa5.75□□□□□ -1.49
GYPB-214ENST00000513557 USP11P51784 963 aa5.75□□□□□ -1.49
GYPB-214ENST00000513557 TAF7LQ5H9L4 462 aa5.75□□□□□ -1.49
GYPB-214ENST00000513557 TDRD10Q5VZ19 366 aaKnown RBP5.75□□□□□ -1.49
GYPB-214ENST00000513557 C16orf86Q6ZW13 317 aa5.75□□□□□ -1.49
GYPB-214ENST00000513557 LRRC47Q8N1G4 583 aaKnown RBP5.75□□□□□ -1.49
GYPB-214ENST00000513557 SPATA9Q9BWV2 254 aa5.75□□□□□ -1.49
GYPB-214ENST00000513557 CWC22Q9HCG8 908 aaKnown RBP5.75□□□□□ -1.49
GYPB-214ENST00000513557 MYO15BQ96JP2 1530 aa5.74□□□□□ -1.49
GYPB-214ENST00000513557 ALX3O95076 343 aa5.74□□□□□ -1.49
GYPB-214ENST00000513557 SPATA31C1P0DKV0 1188 aa5.74□□□□□ -1.49
GYPB-214ENST00000513557 GLB1P16278 677 aa5.74□□□□□ -1.49
GYPB-214ENST00000513557 ZNF143P52747 638 aaPredicted RBP5.74□□□□□ -1.49
GYPB-214ENST00000513557 KIAA0907Q7Z7F0 614 aaPredicted RBP5.74□□□□□ -1.49
GYPB-214ENST00000513557 PPFIBP1Q86W92 1011 aa5.74□□□□□ -1.49
GYPB-214ENST00000513557 BEND7Q8N7W2 519 aaPredicted RBP5.74□□□□□ -1.49
GYPB-214ENST00000513557 MFSD2AQ8NA29 543 aa5.74□□□□□ -1.49
GYPB-214ENST00000513557 ZSWIM2Q8NEG5 633 aa5.74□□□□□ -1.49
GYPB-214ENST00000513557 SMARCC1Q92922 1105 aaPredicted RBP5.74□□□□□ -1.49
GYPB-214ENST00000513557 LENG1Q96BZ8 264 aaPredicted RBP5.74□□□□□ -1.49
GYPB-214ENST00000513557 FEZ1Q99689 392 aa5.74□□□□□ -1.49
GYPB-214ENST00000513557 HAUS7Q99871 368 aa5.74□□□□□ -1.49
GYPB-214ENST00000513557 YIPF2Q9BWQ6 316 aa5.74□□□□□ -1.49
GYPB-214ENST00000513557 ACSS3Q9H6R3 686 aa5.74□□□□□ -1.49
GYPB-214ENST00000513557 DAGLAQ9Y4D2 1042 aa5.74□□□□□ -1.49
GYPB-214ENST00000513557 CC2D2AQ9P2K1 1620 aa5.74□□□□□ -1.49
GYPB-214ENST00000513557 ANKRD34BA5PLL1 514 aa5.73□□□□□ -1.49
GYPB-214ENST00000513557 C9IYK1 514 aa5.73□□□□□ -1.49
GYPB-214ENST00000513557 PPP1R12AO14974 1030 aaPredicted RBP5.73□□□□□ -1.49
GYPB-214ENST00000513557 EPHX1P07099 455 aa5.73□□□□□ -1.49
GYPB-214ENST00000513557 FAM153BP0C7A2 387 aa5.73□□□□□ -1.49
GYPB-214ENST00000513557 PTPROQ16827 1216 aa5.73□□□□□ -1.49
GYPB-214ENST00000513557 LONRF2Q1L5Z9 754 aa5.73□□□□□ -1.49
GYPB-214ENST00000513557 SV2CQ496J9 727 aa5.73□□□□□ -1.49
GYPB-214ENST00000513557 AXDND1Q5T1B0 1012 aaPredicted RBP5.73□□□□□ -1.49
GYPB-214ENST00000513557 HEATR6Q6AI08 1181 aaKnown RBP5.73□□□□□ -1.49
GYPB-214ENST00000513557 CCDC144CPQ8IYA2 1237 aa5.73□□□□□ -1.49
GYPB-214ENST00000513557 SYNPOQ8N3V7 929 aa5.73□□□□□ -1.49
GYPB-214ENST00000513557 SGSM3Q96HU1 749 aa5.73□□□□□ -1.49
GYPB-214ENST00000513557 APBA2Q99767 749 aa5.73□□□□□ -1.49
GYPB-214ENST00000513557 TTBK1Q5TCY1 1321 aaPredicted RBP5.73□□□□□ -1.49
GYPB-214ENST00000513557 ADCY3O60266 1144 aa5.72□□□□□ -1.49
GYPB-214ENST00000513557 DNAJC6O75061 913 aa5.72□□□□□ -1.49
GYPB-214ENST00000513557 APBA3O96018 575 aa5.72□□□□□ -1.49
GYPB-214ENST00000513557 IBSPP21815 317 aaPredicted RBP5.72□□□□□ -1.49
GYPB-214ENST00000513557 GYS2P54840 703 aa5.72□□□□□ -1.49
GYPB-214ENST00000513557 RNF4P78317 190 aa5.72□□□□□ -1.49
GYPB-214ENST00000513557 NRG1Q02297 640 aaPredicted RBP5.72□□□□□ -1.49
GYPB-214ENST00000513557 TCEA2Q15560 299 aa5.72□□□□□ -1.49
GYPB-214ENST00000513557 TMEM67Q5HYA8 995 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms