RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 LRRC47Q8N1G4 583 aaKnown RBP14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 SERTAD1Q9UHV2 236 aa14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 FAM13AO94988 1023 aa14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 USP17L8P0C7I0 530 aa14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 DNA2P51530 1060 aa14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 CCDC17Q96LX7 622 aa14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 GBP3Q9H0R5 595 aa14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 RPAP1Q9BWH6 1393 aaPredicted RBP14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 A0A1W2PQ27 194 aa14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 A0A1W2PQ64 194 aa14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 A0A1W2PQD8 194 aa14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 ZNF75DP51815 510 aa14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 SNX29Q8TEQ0 813 aa14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 PICK1Q9NRD5 415 aa14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 SERPINB13Q9UIV8 391 aa14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 LUC7L2Q9Y383 392 aaKnown RBP14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 FMNL1O95466 1100 aaPredicted RBP14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 CALCRLQ16602 461 aa14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 HAUS3Q68CZ6 603 aa14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 CCDC174Q6PII3 467 aa14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 FOXP1Q9H334 677 aaPredicted RBP14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 DBNDD1Q9H9R9 158 aa14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 CCDC175P0C221 793 aa14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 USH1GQ495M9 461 aa14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 GPKOWQ92917 476 aaPredicted RBP eCLIP14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 ALS2CR12Q96Q35 445 aa14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 POLR3EQ9NVU0 708 aa14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 FER1L4A9Z1Z3 1794 aa14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 NPR1P16066 1061 aa14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 RFX5P48382 616 aaPredicted RBP14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 INF2Q27J81 1249 aa14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 GALNT17Q6IS24 598 aa14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 CPXCR1Q8N123 301 aa14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 BIN2Q9UBW5 565 aaPredicted RBP14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 CLEC11AQ9Y240 323 aa14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 ABCC12Q96J65 1359 aa14.75□□□□□ -0.05
PCDHA4-202ENST00000512229 NOP2P46087 812 aaKnown RBP14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 NDUFA8P51970 172 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 KIF23Q02241 960 aaPredicted RBP14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 CNNM4Q6P4Q7 775 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 CLIC6Q96NY7 704 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 BRIP1Q9BX63 1249 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 B4DLN1 442 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 TRAF5O00463 557 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 KRT13P13646 458 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 TSGA10IPQ3SY00 556 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 EHBP1Q8NDI1 1231 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 BCS1LQ9Y276 419 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 CAMTA2O94983 1202 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 CFBP00751 764 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 SSR1P43307 286 aaKnown RBP14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 PNOCQ13519 176 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 BARGINQ6ZT62 677 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 CHURC1Q8WUH1 139 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 CNKSR2Q8WXI2 1034 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 BICD1Q96G01 975 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 KAZALD1Q96I82 304 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 GPR101Q96P66 508 aaPredicted RBP14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 TUBB4AP04350 444 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 PTGDRQ13258 359 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 NFIXQ14938 502 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 SKIDA1Q1XH10 827 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 CABP7Q86V35 215 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 CNGA4Q8IV77 575 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 COA1Q9GZY4 146 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 VPS16Q9H269 839 aa14.74□□□□□ -0.05
PCDHA4-202ENST00000512229 FRMPD2Q68DX3 1309 aaPredicted RBP14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 ICA1Q05084 483 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 TBC1D8BQ0IIM8 1120 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 TNFAIP1Q13829 316 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 USP37Q86T82 979 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 HOOK2Q96ED9 719 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 CCDC42Q96M95 316 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 CTNND2Q9UQB3 1225 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 PAK1Q13153 545 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 RC3H1Q5TC82 1133 aaKnown RBP14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 SMIM5Q71RC9 77 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 CSGALNACT2Q8N6G5 542 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 LINC00301Q8NCQ3 95 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 AIFM3Q96NN9 605 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 FTOQ9C0B1 505 aaKnown RBP eCLIP14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 ZBTB21Q9ULJ3 1066 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 CCDC172P0C7W6 258 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 CETN2P41208 172 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 ALX1Q15699 326 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 SLC27A3Q5K4L6 730 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 TMED8Q6PL24 325 aaPredicted RBP14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 TBC1D10CQ8IV04 446 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 PSTPIP2Q9H939 334 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 SPATA31A5Q5VU36 1347 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 SPATA31A7Q8IWB4 1347 aa14.73□□□□□ -0.05
PCDHA4-202ENST00000512229 MEGF6O75095 1541 aa14.72□□□□□ -0.05
PCDHA4-202ENST00000512229 GOLGA6L10A6NI86 522 aa14.72□□□□□ -0.05
PCDHA4-202ENST00000512229 TCP10L2B9ZVM9 353 aa14.72□□□□□ -0.05
PCDHA4-202ENST00000512229 RESTQ13127 1097 aa14.72□□□□□ -0.05
PCDHA4-202ENST00000512229 ITPK1Q13572 414 aa14.72□□□□□ -0.05
PCDHA4-202ENST00000512229 SF3B3Q15393 1217 aaKnown RBP14.72□□□□□ -0.05
PCDHA4-202ENST00000512229 DYNLL2Q96FJ2 89 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms