RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 TTC1Q99614 292 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 STK39Q9UEW8 545 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 IPO11Q9UI26 975 aaKnown RBP5.51□□□□□ -1.53
PTPN13-209ENST00000511467 MORC2Q9Y6X9 1032 aaPredicted RBP5.51□□□□□ -1.53
PTPN13-209ENST00000511467 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.51□□□□□ -1.53
PTPN13-209ENST00000511467 UBN2Q6ZU65 1347 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 M0QZ92 97 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 NLRX1Q86UT6 975 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 RTKN2Q8IZC4 609 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 DDX54Q8TDD1 881 aaKnown RBP5.51□□□□□ -1.53
PTPN13-209ENST00000511467 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTPN13-209ENST00000511467 ESYT1Q9BSJ8 1104 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 KIAA1586Q9HCI6 787 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 MKRN1Q9UHC7 482 aaKnown RBP5.51□□□□□ -1.53
PTPN13-209ENST00000511467 DIS3Q9Y2L1 958 aaKnown RBP5.51□□□□□ -1.53
PTPN13-209ENST00000511467 CCDC96Q2M329 555 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 WDR44Q5JSH3 913 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 KBTBD3Q8NAB2 608 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 KCND2Q9NZV8 630 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 GGA1Q9UJY5 639 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 GOLGA8TH3BQL2 631 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 PRPF40AO75400 957 aaKnown RBP5.51□□□□□ -1.53
PTPN13-209ENST00000511467 GOLGA8HP0CJ92 632 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 CTNNA2P26232 953 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 PDE1AP54750 535 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 RUFY3Q7L099 469 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 UBE3BQ7Z3V4 1068 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 PDILTQ8N807 584 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 TANGO6Q9C0B7 1094 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 RAB17Q9H0T7 212 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 SIL1Q9H173 461 aa5.51□□□□□ -1.53
PTPN13-209ENST00000511467 GOLGA8MH3BSY2 632 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 MATR3P43243 847 aaKnown RBP eCLIP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 ARL6IP4Q66PJ3 421 aaKnown RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 CCDC113Q9H0I3 377 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 GZF1Q9H116 711 aaPredicted RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 VCX3BQ9H321 246 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 EVI5O60447 810 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 TRIM28Q13263 835 aaKnown RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 SMC1BQ8NDV3 1235 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 GRK7Q8WTQ7 553 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 POP5Q969H6 163 aaKnown RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 SLAIN2Q9P270 581 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 ABCF2Q9UG63 623 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 MRPL11Q9Y3B7 192 aaKnown RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 COL15A1P39059 1388 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 ECM29Q5VYK3 1845 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 NUTM2FA1L443 756 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 EYA2O00167 538 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 PPARGP37231 505 aaPredicted RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 RNASELQ05823 741 aaKnown RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 TRPC3Q13507 836 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 CWC27Q6UX04 472 aaKnown RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 RAB3IPQ96QF0 476 aaPredicted RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 MBIPQ9NS73 344 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 STAP2Q9UGK3 403 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 FBXO40Q9UH90 709 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 MYL6BP14649 208 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 KPNA2P52292 529 aaKnown RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 FOSBP53539 338 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 TMTC1Q8IUR5 882 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 TRIM42Q8IWZ5 723 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 NEK11Q8NG66 645 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 SPZ1Q9BXG8 430 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 VPS37BQ9H9H4 285 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 SEL1LQ9UBV2 794 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 STK17AQ9UEE5 414 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 PCDHB13Q9Y5F0 798 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 XDHP47989 1333 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 STK36Q9NRP7 1315 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 PIKFYVEQ9Y2I7 2098 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 H7C1D1 291 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 ATP8B1O43520 1251 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 STAM2O75886 525 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 ASPHQ12797 758 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 KIF22Q14807 665 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 NOLC1Q14978 699 aaKnown RBP eCLIP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 RSPH3Q86UC2 560 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 USP48Q86UV5 1035 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 PROM2Q8N271 834 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 MRPL50Q8N5N7 158 aaKnown RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 PRPF31Q8WWY3 499 aaKnown RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 ALDH8A1Q9H2A2 487 aaPredicted RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 FAM96AQ9H5X1 160 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 ZBTB40Q9NUA8 1239 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 PCCAP05165 728 aaPredicted RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 DEUP1Q05D60 604 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 ZNF771Q7L3S4 317 aaPredicted RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 KIAA0825Q8IV33 1275 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 NSMCE1Q8WV22 266 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 ZNF512BQ96KM6 892 aaPredicted RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 NUP88Q99567 741 aaPredicted RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 PRR12Q9ULL5 1215 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 PIK3C2AO00443 1686 aa5.5□□□□□ -1.53
PTPN13-209ENST00000511467 POLR2AP24928 1970 aaKnown RBP5.5□□□□□ -1.53
PTPN13-209ENST00000511467 GMNNO75496 209 aa5.49□□□□□ -1.53
PTPN13-209ENST00000511467 GNAT1P11488 350 aa5.49□□□□□ -1.53
PTPN13-209ENST00000511467 HOXC9P31274 260 aa5.49□□□□□ -1.53
PTPN13-209ENST00000511467 MTIF2P46199 727 aaKnown RBP5.49□□□□□ -1.53
PTPN13-209ENST00000511467 TCIRG1Q13488 830 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms