RNA–Protein interactions for RNA: ENST00000511459.1

APBB3-217, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-217	ENST00000511459	CDC37L1	Q7L3B6	337 aa		13.81	□□□□□ -0.2
APBB3-217	ENST00000511459	CHMP4C	Q96CF2	233 aa		13.81	□□□□□ -0.2
APBB3-217	ENST00000511459	ZNF341	Q9BYN7	854 aa		13.81	□□□□□ -0.2
APBB3-217	ENST00000511459	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.81	□□□□□ -0.2
APBB3-217	ENST00000511459	CWC22	Q9HCG8	908 aa	Known RBP	13.81	□□□□□ -0.2
APBB3-217	ENST00000511459	MTMR4	Q9NYA4	1195 aa		13.81	□□□□□ -0.2
APBB3-217	ENST00000511459	ZNF112	Q9UJU3	913 aa		13.81	□□□□□ -0.2
APBB3-217	ENST00000511459	SLC12A7	Q9Y666	1083 aa		13.81	□□□□□ -0.2
APBB3-217	ENST00000511459	GREB1L	Q9C091	1923 aa	Predicted RBP	13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	SSC5D	A1L4H1	1573 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	PFKFB2	O60825	505 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	GH2	P01242	217 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	CAP2	P40123	477 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	STK3	Q13188	491 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	CUL4A	Q13619	759 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	SEPT2	Q15019	361 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	MAP1S	Q66K74	1059 aa	Predicted RBP	13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	APOA5	Q6Q788	366 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	LDHD	Q86WU2	507 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	NECAB1	Q8N987	351 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	CDCA5	Q96FF9	252 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	TMEM47	Q9BQJ4	181 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	KANSL2	Q9H9L4	492 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	CABP5	Q9NP86	173 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	CHMP5	Q9NZZ3	219 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	STX8	Q9UNK0	236 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	HPS5	Q9UPZ3	1129 aa		13.8	□□□□□ -0.2
APBB3-217	ENST00000511459	GOLGA8B	A8MQT2	603 aa		13.79	□□□□□ -0.2
APBB3-217	ENST00000511459	ZBTB43	O43298	467 aa		13.79	□□□□□ -0.2
APBB3-217	ENST00000511459	USP2	O75604	605 aa	Predicted RBP	13.79	□□□□□ -0.2
APBB3-217	ENST00000511459	TOP1	P11387	765 aa	Known RBP	13.79	□□□□□ -0.2
APBB3-217	ENST00000511459	ST3GAL1	Q11201	340 aa		13.79	□□□□□ -0.2
APBB3-217	ENST00000511459	SCRN1	Q12765	414 aa		13.79	□□□□□ -0.2
APBB3-217	ENST00000511459	RAB11FIP4	Q86YS3	637 aa		13.79	□□□□□ -0.2
APBB3-217	ENST00000511459	CLEC10A	Q8IUN9	316 aa		13.79	□□□□□ -0.2
APBB3-217	ENST00000511459	SIAH1	Q8IUQ4	282 aa		13.79	□□□□□ -0.2
APBB3-217	ENST00000511459	ZNF654	Q8IZM8	581 aa		13.79	□□□□□ -0.2
APBB3-217	ENST00000511459	MYL10	Q9BUA6	226 aa		13.79	□□□□□ -0.2
APBB3-217	ENST00000511459	ZBTB21	Q9ULJ3	1066 aa		13.79	□□□□□ -0.2
APBB3-217	ENST00000511459	FZD1	Q9UP38	647 aa		13.79	□□□□□ -0.2
APBB3-217	ENST00000511459	CTNND1	O60716	968 aa	Known RBP	13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	TTLL1	O95922	423 aa		13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	CCT2	P78371	535 aa	Known RBP	13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	TROAP	Q12815	778 aa		13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	RAB3GAP1	Q15042	981 aa		13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	PPP4R3B	Q5MIZ7	849 aa		13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	SYNE3	Q6ZMZ3	975 aa		13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	CATIP	Q7Z7H3	387 aa		13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	CCDC83	Q8IWF9	413 aa		13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	GTF3C6	Q969F1	213 aa		13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	MKL1	Q969V6	931 aa		13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	KLRG1	Q96E93	195 aa		13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	INTS4	Q96HW7	963 aa	Known RBP	13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	KAT14	Q9H8E8	782 aa		13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	NYAP2	Q9P242	653 aa		13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	CLIP2	Q9UDT6	1046 aa		13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.78	□□□□□ -0.2
APBB3-217	ENST00000511459	DDAH1	O94760	285 aa		13.77	□□□□□ -0.21
APBB3-217	ENST00000511459	ASNS	P08243	561 aa		13.77	□□□□□ -0.21
APBB3-217	ENST00000511459	EEF2	P13639	858 aa	Known RBP	13.77	□□□□□ -0.21
APBB3-217	ENST00000511459	RXRA	P19793	462 aa		13.77	□□□□□ -0.21
APBB3-217	ENST00000511459	INPP5B	P32019	993 aa		13.77	□□□□□ -0.21
APBB3-217	ENST00000511459	METAP2	P50579	478 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
APBB3-217	ENST00000511459	RCAN1	P53805	252 aa		13.77	□□□□□ -0.21
APBB3-217	ENST00000511459	ICA1	Q05084	483 aa		13.77	□□□□□ -0.21
APBB3-217	ENST00000511459	PRKG1	Q13976	671 aa		13.77	□□□□□ -0.21
APBB3-217	ENST00000511459	MICU3	Q86XE3	530 aa		13.77	□□□□□ -0.21
APBB3-217	ENST00000511459	PNMA1	Q8ND90	353 aa		13.77	□□□□□ -0.21
APBB3-217	ENST00000511459	NUP133	Q8WUM0	1156 aa		13.77	□□□□□ -0.21
APBB3-217	ENST00000511459	WRNIP1	Q96S55	665 aa		13.77	□□□□□ -0.21
APBB3-217	ENST00000511459	GINM1	Q9NU53	330 aa		13.77	□□□□□ -0.21
APBB3-217	ENST00000511459	NID2	Q14112	1375 aa		13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	GOLGA8A	A7E2F4	631 aa		13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	TRAF5	O00463	557 aa		13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	PPP1R12B	O60237	982 aa	Predicted RBP	13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	CALM1	P0DP23	149 aa		13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	CALM2	P0DP24	149 aa		13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	CALM3	P0DP25	149 aa		13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	NF2	P35240	595 aa		13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	ATP2B2	Q01814	1243 aa		13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	CCDC144CP	Q8IYA2	1237 aa		13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	LRRC47	Q8N1G4	583 aa	Known RBP	13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	FANCB	Q8NB91	859 aa		13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	NCOA5	Q9HCD5	579 aa	Known RBP	13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	FOXD4L1	Q9NU39	408 aa		13.76	□□□□□ -0.21
APBB3-217	ENST00000511459	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.76	□□□□□ -0.21
APBB3-217	ENST00000511459		A0A1W2PRG0	241 aa		13.75	□□□□□ -0.21
APBB3-217	ENST00000511459	CDC27	P30260	824 aa		13.75	□□□□□ -0.21
APBB3-217	ENST00000511459	ADD1	P35611	737 aa	Known RBP	13.75	□□□□□ -0.21
APBB3-217	ENST00000511459	MAP3K9	P80192	1104 aa		13.75	□□□□□ -0.21
APBB3-217	ENST00000511459	NUCB2	P80303	420 aa		13.75	□□□□□ -0.21
APBB3-217	ENST00000511459	FMR1	Q06787	632 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
APBB3-217	ENST00000511459	RTN1	Q16799	776 aa		13.75	□□□□□ -0.21
APBB3-217	ENST00000511459	NOL9	Q5SY16	702 aa	Known RBP	13.75	□□□□□ -0.21
APBB3-217	ENST00000511459	CHADL	Q6NUI6	762 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms