RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 SLC38A3Q99624 504 aa5.92□□□□□ -1.46
TOPBP1-208ENST00000511439 PRDM5Q9NQX1 630 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-208ENST00000511439 FAM53CQ9NYF3 392 aa5.92□□□□□ -1.46
TOPBP1-208ENST00000511439 FAM8A1Q9UBU6 413 aa5.92□□□□□ -1.46
TOPBP1-208ENST00000511439 ADAMTS6Q9UKP5 1117 aa5.92□□□□□ -1.46
TOPBP1-208ENST00000511439 PCDHA4Q9UN74 947 aa5.92□□□□□ -1.46
TOPBP1-208ENST00000511439 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-208ENST00000511439 SETD1AO15047 1707 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 WDR7Q9Y4E6 1490 aa5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 DCDC2CA8MYV0 355 aa5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 LRIG2O94898 1065 aa5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 NTF4P34130 210 aa5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 CD96P40200 585 aa5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 IKZF1Q13422 519 aa5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 FAM214BQ7L5A3 538 aa5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 C12orf40Q86WS4 652 aa5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 KSR1Q8IVT5 923 aa5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 SPACA3Q8IXA5 215 aa5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 GRIN3AQ8TCU5 1115 aa5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 FOXQ1Q9C009 403 aa5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 MRS2Q9HD23 443 aa5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 RGS17Q9UGC6 210 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 CSADQ9Y600 493 aa5.91□□□□□ -1.46
TOPBP1-208ENST00000511439 FANCAO15360 1455 aa5.9□□□□□ -1.46
TOPBP1-208ENST00000511439 ERICH3Q5RHP9 1530 aa5.9□□□□□ -1.46
TOPBP1-208ENST00000511439 ARHGEF40Q8TER5 1519 aa5.9□□□□□ -1.46
TOPBP1-208ENST00000511439 KDM5BQ9UGL1 1544 aa5.9□□□□□ -1.46
TOPBP1-208ENST00000511439 TOM1O60784 492 aa5.9□□□□□ -1.46
TOPBP1-208ENST00000511439 VAMP1P23763 118 aa5.9□□□□□ -1.46
TOPBP1-208ENST00000511439 ITGAEP38570 1179 aa5.9□□□□□ -1.46
TOPBP1-208ENST00000511439 ZP2Q05996 745 aa5.9□□□□□ -1.46
TOPBP1-208ENST00000511439 ZNF648Q5T619 568 aaPredicted RBP5.9□□□□□ -1.46
TOPBP1-208ENST00000511439 HDXQ7Z353 690 aa5.9□□□□□ -1.46
TOPBP1-208ENST00000511439 MRRFQ96E11 262 aaKnown RBP5.9□□□□□ -1.46
TOPBP1-208ENST00000511439 BCL11AQ9H165 835 aa5.9□□□□□ -1.46
TOPBP1-208ENST00000511439 LMCD1Q9NZU5 365 aa5.9□□□□□ -1.46
TOPBP1-208ENST00000511439 KIAA1522Q9P206 1035 aaPredicted RBP5.9□□□□□ -1.46
TOPBP1-208ENST00000511439 DBX1A6NMT0 343 aa5.89□□□□□ -1.47
TOPBP1-208ENST00000511439 FBXO24O75426 580 aa5.89□□□□□ -1.47
TOPBP1-208ENST00000511439 PAGE1O75459 146 aa5.89□□□□□ -1.47
TOPBP1-208ENST00000511439 CTSHP09668 335 aa5.89□□□□□ -1.47
TOPBP1-208ENST00000511439 USP17L7P0C7H9 530 aa5.89□□□□□ -1.47
TOPBP1-208ENST00000511439 PCNX4Q63HM2 1172 aa5.89□□□□□ -1.47
TOPBP1-208ENST00000511439 ZNF746Q6NUN9 644 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-208ENST00000511439 MPRIPQ6WCQ1 1025 aa5.89□□□□□ -1.47
TOPBP1-208ENST00000511439 C22orf34Q6ZV56 151 aa5.89□□□□□ -1.47
TOPBP1-208ENST00000511439 SV2BQ7L1I2 683 aa5.89□□□□□ -1.47
TOPBP1-208ENST00000511439 ARMCX6Q7L4S7 300 aa5.89□□□□□ -1.47
TOPBP1-208ENST00000511439 ZSWIM9Q86XI8 627 aa5.89□□□□□ -1.47
TOPBP1-208ENST00000511439 BHLHE22Q8NFJ8 381 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-208ENST00000511439 VTI1BQ9UEU0 232 aa5.89□□□□□ -1.47
TOPBP1-208ENST00000511439 TNIKQ9UKE5 1360 aa5.89□□□□□ -1.47
TOPBP1-208ENST00000511439 KIAA0556O60303 1618 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 ZCCHC11Q5TAX3 1644 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 EOMESO95936 686 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 CAP2P40123 477 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 AFMP43652 599 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 RBM25P49756 843 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 KCNMB1Q16558 191 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 NKPD1Q17RQ9 610 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 LDLRAD1Q5T700 205 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 MFSD2AQ8NA29 543 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 CCDC120Q96HB5 630 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 CRELD1Q96HD1 420 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 COX4I2Q96KJ9 171 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 FAM84AQ96KN4 292 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 SNCAIPQ9Y6H5 919 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 TTBK1Q5TCY1 1321 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 PITPNM2Q9BZ72 1349 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 PHLDB1Q86UU1 1377 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 UACAQ9BZF9 1416 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 FER1L4A9Z1Z3 1794 aa5.88□□□□□ -1.47
TOPBP1-208ENST00000511439 PRAMEF27A3QJZ7 478 aa5.87□□□□□ -1.47
TOPBP1-208ENST00000511439 FAM155AB1AL88 458 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-208ENST00000511439 SFRP5Q5T4F7 317 aa5.87□□□□□ -1.47
TOPBP1-208ENST00000511439 CYFIP1Q7L576 1253 aa5.87□□□□□ -1.47
TOPBP1-208ENST00000511439 BACH2Q9BYV9 841 aa5.87□□□□□ -1.47
TOPBP1-208ENST00000511439 TPX2Q9ULW0 747 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-208ENST00000511439 ZNF335Q9H4Z2 1342 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-208ENST00000511439 NCOA1Q15788 1441 aa5.87□□□□□ -1.47
TOPBP1-208ENST00000511439 USP31Q70CQ4 1352 aa5.86□□□□□ -1.47
TOPBP1-208ENST00000511439 LRRC10BA6NIK2 292 aa5.86□□□□□ -1.47
TOPBP1-208ENST00000511439 CELA3AP09093 270 aa5.86□□□□□ -1.47
TOPBP1-208ENST00000511439 ZNF865P0CJ78 1059 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-208ENST00000511439 LMNB1P20700 586 aa5.86□□□□□ -1.47
TOPBP1-208ENST00000511439 MEI1Q5TIA1 1274 aa5.86□□□□□ -1.47
TOPBP1-208ENST00000511439 UBE3DQ7Z6J8 389 aa5.86□□□□□ -1.47
TOPBP1-208ENST00000511439 HID1Q8IV36 788 aa5.86□□□□□ -1.47
TOPBP1-208ENST00000511439 MFSD4AQ8N468 514 aa5.86□□□□□ -1.47
TOPBP1-208ENST00000511439 WNT10AQ9GZT5 417 aa5.86□□□□□ -1.47
TOPBP1-208ENST00000511439 TTF2Q9UNY4 1162 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-208ENST00000511439 CTNND2Q9UQB3 1225 aa5.86□□□□□ -1.47
TOPBP1-208ENST00000511439 RECKO95980 971 aa5.85□□□□□ -1.47
TOPBP1-208ENST00000511439 CYP7A1P22680 504 aa5.85□□□□□ -1.47
TOPBP1-208ENST00000511439 ST13P50502 369 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-208ENST00000511439 ETF1P62495 437 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-208ENST00000511439 RPS26P62854 115 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-208ENST00000511439 TAF1CQ15572 869 aaPredicted RBP5.85□□□□□ -1.47
TOPBP1-208ENST00000511439 LRFN4Q6PJG9 635 aa5.85□□□□□ -1.47
TOPBP1-208ENST00000511439 PLPPR2Q96GM1 343 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms