RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 USP17L10C9JJH3 530 aa15.24■□□□□ 0.03
COL6A6-203ENST00000511332 PRDM1O75626 825 aa15.24■□□□□ 0.03
COL6A6-203ENST00000511332 TSPY3P0CV98 308 aa15.24■□□□□ 0.03
COL6A6-203ENST00000511332 TSPY8P0CW00 308 aa15.24■□□□□ 0.03
COL6A6-203ENST00000511332 PTH1RQ03431 593 aa15.24■□□□□ 0.03
COL6A6-203ENST00000511332 MTMR2Q13614 643 aa15.24■□□□□ 0.03
COL6A6-203ENST00000511332 PPP4R3BQ5MIZ7 849 aa15.24■□□□□ 0.03
COL6A6-203ENST00000511332 AKNAD1Q5T1N1 836 aa15.24■□□□□ 0.03
COL6A6-203ENST00000511332 MFSD6Q6ZSS7 791 aa15.24■□□□□ 0.03
COL6A6-203ENST00000511332 TBC1D10CQ8IV04 446 aa15.24■□□□□ 0.03
COL6A6-203ENST00000511332 PROCA1Q8NCQ7 364 aaPredicted RBP15.24■□□□□ 0.03
COL6A6-203ENST00000511332 KANSL2Q9H9L4 492 aa15.24■□□□□ 0.03
COL6A6-203ENST00000511332 TOMM22Q9NS69 142 aa15.24■□□□□ 0.03
COL6A6-203ENST00000511332 PCNTO95613 3336 aa15.23■□□□□ 0.03
COL6A6-203ENST00000511332 TSPY2A6NKD2 308 aa15.23■□□□□ 0.03
COL6A6-203ENST00000511332 IGF2BP3O00425 579 aaKnown RBP eCLIP15.23■□□□□ 0.03
COL6A6-203ENST00000511332 FGRP09769 529 aa15.23■□□□□ 0.03
COL6A6-203ENST00000511332 HSPA1AP0DMV8 641 aaKnown RBP15.23■□□□□ 0.03
COL6A6-203ENST00000511332 HSPA1BP0DMV9 641 aaKnown RBP15.23■□□□□ 0.03
COL6A6-203ENST00000511332 GUCY1A2P33402 732 aa15.23■□□□□ 0.03
COL6A6-203ENST00000511332 USP14P54578 494 aa15.23■□□□□ 0.03
COL6A6-203ENST00000511332 BACE1P56817 501 aa15.23■□□□□ 0.03
COL6A6-203ENST00000511332 SH3D19Q5HYK7 790 aa15.23■□□□□ 0.03
COL6A6-203ENST00000511332 GADL1Q6ZQY3 521 aa15.23■□□□□ 0.03
COL6A6-203ENST00000511332 MAP4K1Q92918 833 aa15.23■□□□□ 0.03
COL6A6-203ENST00000511332 LSG1Q9H089 658 aaKnown RBP15.23■□□□□ 0.03
COL6A6-203ENST00000511332 NBPF3Q9H094 633 aa15.23■□□□□ 0.03
COL6A6-203ENST00000511332 TMOD4Q9NZQ9 345 aa15.23■□□□□ 0.03
COL6A6-203ENST00000511332 GTF3C3Q9Y5Q9 886 aa15.23■□□□□ 0.03
COL6A6-203ENST00000511332 RANBP6O60518 1105 aaKnown RBP15.22■□□□□ 0.03
COL6A6-203ENST00000511332 REC8O95072 547 aa15.22■□□□□ 0.03
COL6A6-203ENST00000511332 HMGCS2P54868 508 aa15.22■□□□□ 0.03
COL6A6-203ENST00000511332 RRP12Q5JTH9 1297 aaKnown RBP15.22■□□□□ 0.03
COL6A6-203ENST00000511332 ANKRD23Q86SG2 305 aa15.22■□□□□ 0.03
COL6A6-203ENST00000511332 KIAA1683Q9H0B3 1180 aa15.22■□□□□ 0.03
COL6A6-203ENST00000511332 CNNM2Q9H8M5 875 aa15.22■□□□□ 0.03
COL6A6-203ENST00000511332 SLC45A1Q9Y2W3 748 aa15.22■□□□□ 0.03
COL6A6-203ENST00000511332 RBM8AQ9Y5S9 174 aaKnown RBP15.22■□□□□ 0.03
COL6A6-203ENST00000511332 NEDD4P46934 1319 aa15.21■□□□□ 0.03
COL6A6-203ENST00000511332 BTBD19C9JJ37 291 aa15.21■□□□□ 0.03
COL6A6-203ENST00000511332 TFAP4Q01664 338 aa15.21■□□□□ 0.03
COL6A6-203ENST00000511332 PABPC4Q13310 644 aaKnown RBP eCLIP15.21■□□□□ 0.03
COL6A6-203ENST00000511332 MOGSQ13724 837 aa15.21■□□□□ 0.03
COL6A6-203ENST00000511332 USP17L2Q6R6M4 530 aa15.21■□□□□ 0.03
COL6A6-203ENST00000511332 FAM43AQ8N2R8 423 aa15.21■□□□□ 0.03
COL6A6-203ENST00000511332 NEDD1Q8NHV4 660 aa15.21■□□□□ 0.03
COL6A6-203ENST00000511332 ESR2Q92731 530 aa15.21■□□□□ 0.03
COL6A6-203ENST00000511332 PTPN18Q99952 460 aa15.21■□□□□ 0.03
COL6A6-203ENST00000511332 CFHR5Q9BXR6 569 aa15.21■□□□□ 0.03
COL6A6-203ENST00000511332 RNF186Q9NXI6 227 aa15.21■□□□□ 0.03
COL6A6-203ENST00000511332 AGTPBP1Q9UPW5 1226 aa15.21■□□□□ 0.03
COL6A6-203ENST00000511332 IGKV6D-41A0A0C4DH26 115 aa15.2■□□□□ 0.02
COL6A6-203ENST00000511332 TRPA1O75762 1119 aa15.2■□□□□ 0.02
COL6A6-203ENST00000511332 TAF1CQ15572 869 aaPredicted RBP15.2■□□□□ 0.02
COL6A6-203ENST00000511332 ZYXQ15942 572 aaKnown RBP15.2■□□□□ 0.02
COL6A6-203ENST00000511332 FAM47AQ5JRC9 791 aa15.2■□□□□ 0.02
COL6A6-203ENST00000511332 RNF20Q5VTR2 975 aa15.2■□□□□ 0.02
COL6A6-203ENST00000511332 CLEC10AQ8IUN9 316 aa15.2■□□□□ 0.02
COL6A6-203ENST00000511332 C12orf42Q96LP6 360 aa15.2■□□□□ 0.02
COL6A6-203ENST00000511332 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.2■□□□□ 0.02
COL6A6-203ENST00000511332 KRT23Q9C075 422 aa15.2■□□□□ 0.02
COL6A6-203ENST00000511332 PNMA3Q9UL41 463 aa15.2■□□□□ 0.02
COL6A6-203ENST00000511332 SYNPO2Q9UMS6 1093 aa15.2■□□□□ 0.02
COL6A6-203ENST00000511332 A0A0G2JMZ2 1700 aa15.2■□□□□ 0.02
COL6A6-203ENST00000511332 MGAMO43451 1857 aa15.19■□□□□ 0.02
COL6A6-203ENST00000511332 PDHXO00330 501 aa15.19■□□□□ 0.02
COL6A6-203ENST00000511332 EIF5BO60841 1220 aaKnown RBP15.19■□□□□ 0.02
COL6A6-203ENST00000511332 TTLL1O95922 423 aa15.19■□□□□ 0.02
COL6A6-203ENST00000511332 CYP21A2P08686 494 aa15.19■□□□□ 0.02
COL6A6-203ENST00000511332 EEF2P13639 858 aaKnown RBP15.19■□□□□ 0.02
COL6A6-203ENST00000511332 ATP2B2Q01814 1243 aa15.19■□□□□ 0.02
COL6A6-203ENST00000511332 TRDNQ13061 729 aa15.19■□□□□ 0.02
COL6A6-203ENST00000511332 ACER1Q8TDN7 264 aa15.19■□□□□ 0.02
COL6A6-203ENST00000511332 LPAR1Q92633 364 aa15.19■□□□□ 0.02
COL6A6-203ENST00000511332 CEP95Q96GE4 821 aa15.19■□□□□ 0.02
COL6A6-203ENST00000511332 PARK7Q99497 189 aaKnown RBP15.19■□□□□ 0.02
COL6A6-203ENST00000511332 GOPCQ9HD26 462 aa15.19■□□□□ 0.02
COL6A6-203ENST00000511332 INCENPQ9NQS7 918 aa15.19■□□□□ 0.02
COL6A6-203ENST00000511332 MTMR4Q9NYA4 1195 aa15.19■□□□□ 0.02
COL6A6-203ENST00000511332 NYAP2Q9P242 653 aa15.19■□□□□ 0.02
COL6A6-203ENST00000511332 TMX2Q9Y320 296 aa15.19■□□□□ 0.02
COL6A6-203ENST00000511332 TACC3Q9Y6A5 838 aa15.19■□□□□ 0.02
COL6A6-203ENST00000511332 RLFQ13129 1914 aa15.18■□□□□ 0.02
COL6A6-203ENST00000511332 FOXN1O15353 648 aa15.18■□□□□ 0.02
COL6A6-203ENST00000511332 CTCFP49711 727 aaPredicted RBP15.18■□□□□ 0.02
COL6A6-203ENST00000511332 TREML2Q5T2D2 321 aa15.18■□□□□ 0.02
COL6A6-203ENST00000511332 GPAT2Q6NUI2 795 aa15.18■□□□□ 0.02
COL6A6-203ENST00000511332 RALYLQ86SE5 291 aaKnown RBP15.18■□□□□ 0.02
COL6A6-203ENST00000511332 ZFYVE28Q9HCC9 887 aa15.18■□□□□ 0.02
COL6A6-203ENST00000511332 A0A1W2PRG0 241 aa15.17■□□□□ 0.02
COL6A6-203ENST00000511332 B4E1Z4 1266 aa15.17■□□□□ 0.02
COL6A6-203ENST00000511332 EPB41L2O43491 1005 aaKnown RBP15.17■□□□□ 0.02
COL6A6-203ENST00000511332 KDM4AO75164 1064 aa15.17■□□□□ 0.02
COL6A6-203ENST00000511332 VCAM1P19320 739 aa15.17■□□□□ 0.02
COL6A6-203ENST00000511332 CRHR2Q13324 411 aa15.17■□□□□ 0.02
COL6A6-203ENST00000511332 DGKZQ13574 1117 aa15.17■□□□□ 0.02
COL6A6-203ENST00000511332 CCDC178Q5BJE1 867 aa15.17■□□□□ 0.02
COL6A6-203ENST00000511332 IQCA1Q86XH1 822 aa15.17■□□□□ 0.02
COL6A6-203ENST00000511332 VCPKMTQ9H867 229 aa15.17■□□□□ 0.02
COL6A6-203ENST00000511332 EMILIN3Q9NT22 766 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms