RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 CUL5Q93034 780 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 NOD2Q9HC29 1040 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 SAR1BQ9Y6B6 198 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 CARMIL3Q8ND23 1372 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 DNM1LO00429 736 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 CCT2P78371 535 aaKnown RBP11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 MYO1EQ12965 1108 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 C1QTNF12Q5T7M4 302 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 TMTC1Q8IUR5 882 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 CNGA4Q8IV77 575 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 P3H4Q92791 437 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 RRP36Q96EU6 259 aaKnown RBP11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 SEC62Q99442 399 aaKnown RBP11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 HPSEQ9Y251 543 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 SCTRP47872 440 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 GUCY1A3Q02108 690 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 NNTQ13423 1086 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 PDIA5Q14554 519 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 PAPD7Q5XG87 772 aaKnown RBP11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 IQCEQ6IPM2 695 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 NFXL1Q6ZNB6 911 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 CCHCR1Q8TD31 782 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 ZNF526Q8TF50 670 aaPredicted RBP11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 CYFIP2Q96F07 1278 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 STAMBPL1Q96FJ0 436 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 NUP58Q9BVL2 599 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 OSBPL7Q9BZF2 842 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 WWC3Q9ULE0 1092 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 OPLAHO14841 1288 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 CDC27P30260 824 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 APBA1Q02410 837 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 TXNDC2Q86VQ3 553 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 YIPF3Q9GZM5 350 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 DACH1Q9UI36 760 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 TSPYL4Q9UJ04 414 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 PCDHGC5Q9Y5F6 944 aa11.24□□□□□ -0.61
PDGFRA-207ENST00000509092 KDRP35968 1356 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 FAM237AA0A1B0GTK4 181 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 PPFIA3O75145 1194 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 PYGLP06737 847 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 SETSIPP0DME0 302 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 FERP16591 822 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 BMP6P22004 513 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 PBX1P40424 430 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 MDH1P40925 334 aaKnown RBP11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 MAGEA8P43361 318 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 EPHB4P54760 987 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 ELF3P78545 371 aaPredicted RBP11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 ROR2Q01974 943 aaKnown RBP11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 LAMB3Q13751 1172 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 ANO1Q5XXA6 986 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 EMBQ6PCB8 327 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 METTL16Q86W50 562 aaKnown RBP11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 SH2D3CQ8N5H7 860 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 EHBP1Q8NDI1 1231 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 EZH1Q92800 747 aaPredicted RBP11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 EID1Q9Y6B2 187 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 ANKARQ7Z5J8 1434 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 ZMYM6O95789 1325 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 E7EVH7 732 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 TAF5LO75529 589 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 NR1D1P20393 614 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 GCLCP48506 637 aaPredicted RBP11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 PAPOLAP51003 745 aaKnown RBP11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 SEC24CP53992 1094 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 FMR1Q06787 632 aaKnown RBP eCLIP11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 SPRED3Q2MJR0 410 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 ZNF589Q86UQ0 364 aaPredicted RBP11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 TSEN2Q8NCE0 465 aaKnown RBP11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 NUP133Q8WUM0 1156 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 CPLX3Q8WVH0 158 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 CAVIN3Q969G5 261 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 TBC1D31Q96DN5 1066 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 HDAC6Q9UBN7 1215 aa11.23□□□□□ -0.61
PDGFRA-207ENST00000509092 ALKQ9UM73 1620 aa11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 NRXN3Q9Y4C0 1643 aa11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 GHRP10912 638 aa11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 RIPK1Q13546 671 aa11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 ARMC3Q5W041 872 aa11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 MSL1Q68DK7 614 aa11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 PPP4R3AQ6IN85 833 aa11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 SYNE3Q6ZMZ3 975 aa11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 SPATA21Q7Z572 469 aa11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 MLKLQ8NB16 471 aa11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 ALS2CR12Q96Q35 445 aa11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 MIS18AQ9NYP9 233 aa11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 RGL1Q9NZL6 768 aa11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 LMCD1Q9NZU5 365 aa11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 PCDHA5Q9Y5H7 936 aa11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 MINK1Q8N4C8 1332 aaPredicted RBP11.22□□□□□ -0.61
PDGFRA-207ENST00000509092 TEX33O43247 280 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 ANP32DO95626 131 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 ATP1A1P05023 1023 aaKnown RBP11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 HMGB1P09429 215 aaKnown RBP11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 LINGO3P0C6S8 592 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 IMPDH2P12268 514 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 ERVK-24P63145 666 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 BLMHQ13867 455 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 CYP26C1Q6V0L0 522 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms