RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 GOLGA8BA8MQT2 603 aa12.16□□□□□ -0.46
RFC1-211ENST00000509084 MPHOSPH10O00566 681 aaKnown RBP12.16□□□□□ -0.46
RFC1-211ENST00000509084 DHX16O60231 1041 aaKnown RBP12.16□□□□□ -0.46
RFC1-211ENST00000509084 AKR1B1P15121 316 aa12.16□□□□□ -0.46
RFC1-211ENST00000509084 NF2P35240 595 aa12.16□□□□□ -0.46
RFC1-211ENST00000509084 CUL4AQ13619 759 aa12.16□□□□□ -0.46
RFC1-211ENST00000509084 COL9A3Q14050 684 aaPredicted RBP12.16□□□□□ -0.46
RFC1-211ENST00000509084 PPP2R5BQ15173 497 aa12.16□□□□□ -0.46
RFC1-211ENST00000509084 ABCB5Q2M3G0 1257 aa12.16□□□□□ -0.46
RFC1-211ENST00000509084 APOA5Q6Q788 366 aa12.16□□□□□ -0.46
RFC1-211ENST00000509084 NOL8Q76FK4 1167 aaKnown RBP12.16□□□□□ -0.46
RFC1-211ENST00000509084 CDC37L1Q7L3B6 337 aa12.16□□□□□ -0.46
RFC1-211ENST00000509084 KRT26Q7Z3Y9 468 aa12.16□□□□□ -0.46
RFC1-211ENST00000509084 CATIPQ7Z7H3 387 aa12.16□□□□□ -0.46
RFC1-211ENST00000509084 ANKS1AQ92625 1134 aa12.16□□□□□ -0.46
RFC1-211ENST00000509084 INTS4Q96HW7 963 aaKnown RBP12.16□□□□□ -0.46
RFC1-211ENST00000509084 ZKSCAN3Q9BRR0 538 aa12.16□□□□□ -0.46
RFC1-211ENST00000509084 SLKQ9H2G2 1235 aaPredicted RBP12.16□□□□□ -0.46
RFC1-211ENST00000509084 TPCN1Q9ULQ1 816 aa12.16□□□□□ -0.46
RFC1-211ENST00000509084 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.16□□□□□ -0.46
RFC1-211ENST00000509084 SLC12A7Q9Y666 1083 aa12.16□□□□□ -0.46
RFC1-211ENST00000509084 NID2Q14112 1375 aa12.16□□□□□ -0.46
RFC1-211ENST00000509084 IGKV6D-41A0A0C4DH26 115 aa12.15□□□□□ -0.46
RFC1-211ENST00000509084 FAM196BA6NMK8 535 aa12.15□□□□□ -0.46
RFC1-211ENST00000509084 ZBTB43O43298 467 aa12.15□□□□□ -0.46
RFC1-211ENST00000509084 PFKFB2O60825 505 aa12.15□□□□□ -0.46
RFC1-211ENST00000509084 DDAH1O94760 285 aa12.15□□□□□ -0.46
RFC1-211ENST00000509084 NOVP48745 357 aa12.15□□□□□ -0.46
RFC1-211ENST00000509084 APOBRQ0VD83 1088 aa12.15□□□□□ -0.46
RFC1-211ENST00000509084 LDHDQ86WU2 507 aa12.15□□□□□ -0.46
RFC1-211ENST00000509084 NKX2-3Q8TAU0 364 aa12.15□□□□□ -0.46
RFC1-211ENST00000509084 KAT14Q9H8E8 782 aa12.15□□□□□ -0.46
RFC1-211ENST00000509084 KANSL2Q9H9L4 492 aa12.15□□□□□ -0.46
RFC1-211ENST00000509084 SYNPO2Q9UMS6 1093 aa12.15□□□□□ -0.46
RFC1-211ENST00000509084 CCDC196A0A1B0GTZ2 297 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 CTNND1O60716 968 aaKnown RBP12.14□□□□□ -0.47
RFC1-211ENST00000509084 TTLL1O95922 423 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 ASNSP08243 561 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 TOP1P11387 765 aaKnown RBP12.14□□□□□ -0.47
RFC1-211ENST00000509084 PDIA3P30101 505 aaKnown RBP12.14□□□□□ -0.47
RFC1-211ENST00000509084 CLCN6P51797 869 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 ME3Q16798 604 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 NBPF12Q5TAG4 269 aaPredicted RBP12.14□□□□□ -0.47
RFC1-211ENST00000509084 CPLX2Q6PUV4 134 aaKnown RBP12.14□□□□□ -0.47
RFC1-211ENST00000509084 USP48Q86UV5 1035 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 CDAN1Q8IWY9 1227 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 ZNF654Q8IZM8 581 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 ZNF579Q8NAF0 562 aaKnown RBP12.14□□□□□ -0.47
RFC1-211ENST00000509084 GTF3C6Q969F1 213 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 CEP95Q96GE4 821 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 MAP3K14Q99558 947 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 RRAGCQ9HB90 399 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 IL17RBQ9NRM6 502 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 MTMR4Q9NYA4 1195 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 NYAP2Q9P242 653 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 NAP1L2Q9ULW6 460 aaPredicted RBP12.14□□□□□ -0.47
RFC1-211ENST00000509084 STX8Q9UNK0 236 aa12.14□□□□□ -0.47
RFC1-211ENST00000509084 DOCK1Q14185 1865 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 GOLGA8AA7E2F4 631 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 ADM5C9JUS6 153 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 PPP1R12BO60237 982 aaPredicted RBP12.13□□□□□ -0.47
RFC1-211ENST00000509084 NMT2O60551 498 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 CDKL5O76039 1030 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 GDF11O95390 407 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 GH2P01242 217 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 CAP2P40123 477 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 METAP2P50579 478 aaKnown RBP eCLIP12.13□□□□□ -0.47
RFC1-211ENST00000509084 ICA1Q05084 483 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 RCSD1Q6JBY9 416 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 MIGA2Q7L4E1 593 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 PNMA1Q8ND90 353 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 LLPHQ9BRT6 129 aaKnown RBP12.13□□□□□ -0.47
RFC1-211ENST00000509084 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.13□□□□□ -0.47
RFC1-211ENST00000509084 SH2D4AQ9H788 454 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 ARHGEF10LQ9HCE6 1279 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 GPHNQ9NQX3 736 aaPredicted RBP12.13□□□□□ -0.47
RFC1-211ENST00000509084 RBM28Q9NW13 759 aaKnown RBP12.13□□□□□ -0.47
RFC1-211ENST00000509084 ZNF112Q9UJU3 913 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 BRPF3Q9ULD4 1205 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 ZBTB21Q9ULJ3 1066 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 SCAF8Q9UPN6 1271 aaKnown RBP12.13□□□□□ -0.47
RFC1-211ENST00000509084 ATAD5Q96QE3 1844 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 SSC5DA1L4H1 1573 aa12.13□□□□□ -0.47
RFC1-211ENST00000509084 PHF20L1A8MW92 1017 aa12.12□□□□□ -0.47
RFC1-211ENST00000509084 CPLX1O14810 134 aa12.12□□□□□ -0.47
RFC1-211ENST00000509084 LARGE1O95461 756 aa12.12□□□□□ -0.47
RFC1-211ENST00000509084 KIF5BP33176 963 aa12.12□□□□□ -0.47
RFC1-211ENST00000509084 STK3Q13188 491 aa12.12□□□□□ -0.47
RFC1-211ENST00000509084 RTN1Q16799 776 aa12.12□□□□□ -0.47
RFC1-211ENST00000509084 NOL9Q5SY16 702 aaKnown RBP12.12□□□□□ -0.47
RFC1-211ENST00000509084 MICU3Q86XE3 530 aa12.12□□□□□ -0.47
RFC1-211ENST00000509084 CCDC83Q8IWF9 413 aa12.12□□□□□ -0.47
RFC1-211ENST00000509084 CTCFLQ8NI51 663 aaPredicted RBP12.12□□□□□ -0.47
RFC1-211ENST00000509084 CDCA5Q96FF9 252 aa12.12□□□□□ -0.47
RFC1-211ENST00000509084 TMEM47Q9BQJ4 181 aa12.12□□□□□ -0.47
RFC1-211ENST00000509084 LARP6Q9BRS8 491 aaKnown RBP12.12□□□□□ -0.47
RFC1-211ENST00000509084 CWC22Q9HCG8 908 aaKnown RBP12.12□□□□□ -0.47
RFC1-211ENST00000509084 KIF3AQ9Y496 699 aa12.12□□□□□ -0.47
RFC1-211ENST00000509084 POLR2AP24928 1970 aaKnown RBP12.11□□□□□ -0.47
RFC1-211ENST00000509084 GABBR2O75899 941 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms