RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 CAPN2P17655 700 aa15.12■□□□□ 0.01
PDPN-208ENST00000509009 ADD2P35612 726 aa15.12■□□□□ 0.01
PDPN-208ENST00000509009 USP17L24Q0WX57 530 aa15.12■□□□□ 0.01
PDPN-208ENST00000509009 DEFB118Q96PH6 123 aa15.12■□□□□ 0.01
PDPN-208ENST00000509009 KIAA1683Q9H0B3 1180 aa15.12■□□□□ 0.01
PDPN-208ENST00000509009 PAK6Q9NQU5 681 aaPredicted RBP15.12■□□□□ 0.01
PDPN-208ENST00000509009 MYH1P12882 1939 aa15.11■□□□□ 0.01
PDPN-208ENST00000509009 H0YGN5 161 aa15.11■□□□□ 0.01
PDPN-208ENST00000509009 PRKAB2O43741 272 aa15.11■□□□□ 0.01
PDPN-208ENST00000509009 CHGBP05060 677 aa15.11■□□□□ 0.01
PDPN-208ENST00000509009 CYP2D6P10635 497 aa15.11■□□□□ 0.01
PDPN-208ENST00000509009 USP14P54578 494 aa15.11■□□□□ 0.01
PDPN-208ENST00000509009 ERVK-9P63128 1117 aa15.11■□□□□ 0.01
PDPN-208ENST00000509009 ERVK-24P63145 666 aa15.11■□□□□ 0.01
PDPN-208ENST00000509009 SEPT2Q15019 361 aa15.11■□□□□ 0.01
PDPN-208ENST00000509009 ZYXQ15942 572 aaKnown RBP15.11■□□□□ 0.01
PDPN-208ENST00000509009 CATSPERGQ6ZRH7 1159 aa15.11■□□□□ 0.01
PDPN-208ENST00000509009 DPF3Q92784 378 aa15.11■□□□□ 0.01
PDPN-208ENST00000509009 FEZ1Q99689 392 aa15.11■□□□□ 0.01
PDPN-208ENST00000509009 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.11■□□□□ 0.01
PDPN-208ENST00000509009 CRISPLD2Q9H0B8 497 aa15.11■□□□□ 0.01
PDPN-208ENST00000509009 DCTPP1Q9H773 170 aa15.11■□□□□ 0.01
PDPN-208ENST00000509009 MBD4O95243 580 aa15.1■□□□□ 0.01
PDPN-208ENST00000509009 HMGCRP04035 888 aa15.1■□□□□ 0.01
PDPN-208ENST00000509009 CYP2B6P20813 491 aa15.1■□□□□ 0.01
PDPN-208ENST00000509009 MAPK4P31152 587 aa15.1■□□□□ 0.01
PDPN-208ENST00000509009 TRIM32Q13049 653 aa15.1■□□□□ 0.01
PDPN-208ENST00000509009 UBE3CQ15386 1083 aa15.1■□□□□ 0.01
PDPN-208ENST00000509009 GTF3C2Q8WUA4 911 aaPredicted RBP15.1■□□□□ 0.01
PDPN-208ENST00000509009 PAGR1Q9BTK6 254 aa15.1■□□□□ 0.01
PDPN-208ENST00000509009 PORCNQ9H237 461 aa15.1■□□□□ 0.01
PDPN-208ENST00000509009 ATP8A2Q9NTI2 1148 aa15.1■□□□□ 0.01
PDPN-208ENST00000509009 RABGAP1Q9Y3P9 1069 aa15.1■□□□□ 0.01
PDPN-208ENST00000509009 A0A1W2PRG0 241 aa15.09■□□□□ 0.01
PDPN-208ENST00000509009 CNMDO75829 334 aa15.09■□□□□ 0.01
PDPN-208ENST00000509009 FARP2O94887 1054 aaPredicted RBP15.09■□□□□ 0.01
PDPN-208ENST00000509009 XRCC5P13010 732 aaKnown RBP15.09■□□□□ 0.01
PDPN-208ENST00000509009 USP6NLQ92738 828 aa15.09■□□□□ 0.01
PDPN-208ENST00000509009 DYNLL2Q96FJ2 89 aa15.09■□□□□ 0.01
PDPN-208ENST00000509009 NUDT12Q9BQG2 462 aa15.09■□□□□ 0.01
PDPN-208ENST00000509009 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.09■□□□□ 0.01
PDPN-208ENST00000509009 COLQQ9Y215 455 aaPredicted RBP15.09■□□□□ 0.01
PDPN-208ENST00000509009 RPTORQ8N122 1335 aa15.09■□□□□ 0.01
PDPN-208ENST00000509009 MPHOSPH10O00566 681 aaKnown RBP15.08■□□□□ 0
PDPN-208ENST00000509009 VCAM1P19320 739 aa15.08■□□□□ 0
PDPN-208ENST00000509009 MORN1Q5T089 497 aa15.08■□□□□ 0
PDPN-208ENST00000509009 GPR142Q7Z601 462 aa15.08■□□□□ 0
PDPN-208ENST00000509009 PLEKHH3Q7Z736 793 aa15.08■□□□□ 0
PDPN-208ENST00000509009 SIAH1Q8IUQ4 282 aa15.08■□□□□ 0
PDPN-208ENST00000509009 CCAR1Q8IX12 1150 aaKnown RBP15.08■□□□□ 0
PDPN-208ENST00000509009 SLC44A5Q8NCS7 719 aa15.08■□□□□ 0
PDPN-208ENST00000509009 TRIB2Q92519 343 aa15.08■□□□□ 0
PDPN-208ENST00000509009 HTATIP2Q9BUP3 242 aa15.08■□□□□ 0
PDPN-208ENST00000509009 HMX1Q9NP08 348 aaPredicted RBP15.08■□□□□ 0
PDPN-208ENST00000509009 ECHDC1Q9NTX5 307 aa15.08■□□□□ 0
PDPN-208ENST00000509009 SWAP70Q9UH65 585 aa15.08■□□□□ 0
PDPN-208ENST00000509009 CYP2D7A0A087X1C5 515 aa15.07■□□□□ 0
PDPN-208ENST00000509009 USP17L12C9JPN9 530 aa15.07■□□□□ 0
PDPN-208ENST00000509009 USP17L21D6R901 530 aa15.07■□□□□ 0
PDPN-208ENST00000509009 SMIM22K7EJ46 135 aa15.07■□□□□ 0
PDPN-208ENST00000509009 MAP3K21Q5TCX8 1036 aa15.07■□□□□ 0
PDPN-208ENST00000509009 C12orf60Q5U649 245 aa15.07■□□□□ 0
PDPN-208ENST00000509009 ZSCAN25Q6NSZ9 544 aa15.07■□□□□ 0
PDPN-208ENST00000509009 LBX2Q6XYB7 198 aa15.07■□□□□ 0
PDPN-208ENST00000509009 SOCS4Q8WXH5 440 aa15.07■□□□□ 0
PDPN-208ENST00000509009 PUS7LQ9H0K6 701 aaKnown RBP15.07■□□□□ 0
PDPN-208ENST00000509009 RPAP3Q9H6T3 665 aaPredicted RBP15.07■□□□□ 0
PDPN-208ENST00000509009 CDK8P49336 464 aa15.06■□□□□ 0
PDPN-208ENST00000509009 CCNA1P78396 465 aa15.06■□□□□ 0
PDPN-208ENST00000509009 TMEM179Q6ZVK1 233 aa15.06■□□□□ 0
PDPN-208ENST00000509009 TRMT44Q8IYL2 757 aaKnown RBP15.06■□□□□ 0
PDPN-208ENST00000509009 PAWRQ96IZ0 340 aaKnown RBP15.06■□□□□ 0
PDPN-208ENST00000509009 CCDC17Q96LX7 622 aa15.06■□□□□ 0
PDPN-208ENST00000509009 HOXC10Q9NYD6 342 aa15.06■□□□□ 0
PDPN-208ENST00000509009 BTBD7Q9P203 1132 aa15.06■□□□□ 0
PDPN-208ENST00000509009 SLC4A4Q9Y6R1 1079 aa15.06■□□□□ 0
PDPN-208ENST00000509009 TRIOBPQ9H2D6 2365 aa15.06■□□□□ 0
PDPN-208ENST00000509009 SPDYE16A6NNV3 312 aaPredicted RBP15.05■□□□□ -0
PDPN-208ENST00000509009 AKR1B1P15121 316 aa15.05■□□□□ -0
PDPN-208ENST00000509009 RGS2P41220 211 aa15.05■□□□□ -0
PDPN-208ENST00000509009 CACNB2Q08289 660 aaPredicted RBP15.05■□□□□ -0
PDPN-208ENST00000509009 COG2Q14746 738 aa15.05■□□□□ -0
PDPN-208ENST00000509009 KIAA1755Q5JYT7 1200 aa15.05■□□□□ -0
PDPN-208ENST00000509009 CTR9Q6PD62 1173 aa15.05■□□□□ -0
PDPN-208ENST00000509009 STRBPQ96SI9 672 aaKnown RBP15.05■□□□□ -0
PDPN-208ENST00000509009 PCDH10Q9P2E7 1040 aa15.05■□□□□ -0
PDPN-208ENST00000509009 PCDHB15Q9Y5E8 787 aa15.05■□□□□ -0
PDPN-208ENST00000509009 NR2E3Q9Y5X4 410 aa15.05■□□□□ -0
PDPN-208ENST00000509009 GLRX3O76003 335 aaKnown RBP15.04■□□□□ -0
PDPN-208ENST00000509009 PRKAR2AP13861 404 aaKnown RBP15.04■□□□□ -0
PDPN-208ENST00000509009 PTPREP23469 700 aa15.04■□□□□ -0
PDPN-208ENST00000509009 MAP2K5Q13163 448 aa15.04■□□□□ -0
PDPN-208ENST00000509009 CCL14Q16627 93 aa15.04■□□□□ -0
PDPN-208ENST00000509009 C16orf86Q6ZW13 317 aa15.04■□□□□ -0
PDPN-208ENST00000509009 NECAB2Q7Z6G3 386 aa15.04■□□□□ -0
PDPN-208ENST00000509009 ANKLE1Q8NAG6 615 aa15.04■□□□□ -0
PDPN-208ENST00000509009 TMX2Q9Y320 296 aa15.04■□□□□ -0
PDPN-208ENST00000509009 PLXNB2O15031 1838 aa15.03■□□□□ -0
PDPN-208ENST00000509009 SLC15A5A6NIM6 579 aa15.03■□□□□ -0
PDPN-208ENST00000509009 ZKSCAN1P17029 563 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms