RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 CERKLQ49MI3 558 aaPredicted RBP10.43□□□□□ -0.74
SNCA-211ENST00000508895 C12orf60Q5U649 245 aa10.43□□□□□ -0.74
SNCA-211ENST00000508895 FASTKD5Q7L8L6 764 aaKnown RBP10.43□□□□□ -0.74
SNCA-211ENST00000508895 ANKRD13CQ8N6S4 541 aa10.43□□□□□ -0.74
SNCA-211ENST00000508895 NKX2-3Q8TAU0 364 aa10.43□□□□□ -0.74
SNCA-211ENST00000508895 P2RX7Q99572 595 aaKnown RBP10.43□□□□□ -0.74
SNCA-211ENST00000508895 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.43□□□□□ -0.74
SNCA-211ENST00000508895 ASCC2Q9H1I8 757 aaPredicted RBP10.43□□□□□ -0.74
SNCA-211ENST00000508895 OSBPL3Q9H4L5 887 aa10.43□□□□□ -0.74
SNCA-211ENST00000508895 SLC4A4Q9Y6R1 1079 aa10.43□□□□□ -0.74
SNCA-211ENST00000508895 RBBP6Q7Z6E9 1792 aaKnown RBP10.43□□□□□ -0.74
SNCA-211ENST00000508895 GPAA1O43292 621 aa10.42□□□□□ -0.74
SNCA-211ENST00000508895 CNMDO75829 334 aa10.42□□□□□ -0.74
SNCA-211ENST00000508895 ASNSP08243 561 aa10.42□□□□□ -0.74
SNCA-211ENST00000508895 CDK8P49336 464 aa10.42□□□□□ -0.74
SNCA-211ENST00000508895 PRKCZQ05513 592 aa10.42□□□□□ -0.74
SNCA-211ENST00000508895 RAB3GAP1Q15042 981 aa10.42□□□□□ -0.74
SNCA-211ENST00000508895 PKN2Q16513 984 aaKnown RBP10.42□□□□□ -0.74
SNCA-211ENST00000508895 ABCB5Q2M3G0 1257 aa10.42□□□□□ -0.74
SNCA-211ENST00000508895 ZMYM1Q5SVZ6 1142 aa10.42□□□□□ -0.74
SNCA-211ENST00000508895 VPS53Q5VIR6 699 aa10.42□□□□□ -0.74
SNCA-211ENST00000508895 TTC6Q86TZ1 520 aa10.42□□□□□ -0.74
SNCA-211ENST00000508895 PROCA1Q8NCQ7 364 aaPredicted RBP10.42□□□□□ -0.74
SNCA-211ENST00000508895 APPBP2Q92624 585 aa10.42□□□□□ -0.74
SNCA-211ENST00000508895 INCENPQ9NQS7 918 aa10.42□□□□□ -0.74
SNCA-211ENST00000508895 PPP4R2Q9NY27 417 aa10.42□□□□□ -0.74
SNCA-211ENST00000508895 SLC45A1Q9Y2W3 748 aa10.42□□□□□ -0.74
SNCA-211ENST00000508895 COL11A1P12107 1806 aaPredicted RBP10.42□□□□□ -0.74
SNCA-211ENST00000508895 USP17L10C9JJH3 530 aa10.41□□□□□ -0.74
SNCA-211ENST00000508895 DLL1O00548 723 aa10.41□□□□□ -0.74
SNCA-211ENST00000508895 GSPT1P15170 499 aaKnown RBP10.41□□□□□ -0.74
SNCA-211ENST00000508895 MTFR1Q15390 333 aa10.41□□□□□ -0.74
SNCA-211ENST00000508895 TMED8Q6PL24 325 aaPredicted RBP10.41□□□□□ -0.74
SNCA-211ENST00000508895 C16orf86Q6ZW13 317 aa10.41□□□□□ -0.74
SNCA-211ENST00000508895 ARMC5Q96C12 935 aa10.41□□□□□ -0.74
SNCA-211ENST00000508895 FAM227BQ96M60 508 aa10.41□□□□□ -0.74
SNCA-211ENST00000508895 PARK7Q99497 189 aaKnown RBP10.41□□□□□ -0.74
SNCA-211ENST00000508895 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.41□□□□□ -0.74
SNCA-211ENST00000508895 RBPJLQ9UBG7 517 aa10.41□□□□□ -0.74
SNCA-211ENST00000508895 SRRDQ9UH36 339 aa10.41□□□□□ -0.74
SNCA-211ENST00000508895 SMCHD1A6NHR9 2005 aa10.4□□□□□ -0.74
SNCA-211ENST00000508895 EN2P19622 333 aaPredicted RBP10.4□□□□□ -0.74
SNCA-211ENST00000508895 HOXA7P31268 230 aaPredicted RBP10.4□□□□□ -0.74
SNCA-211ENST00000508895 HABP4Q5JVS0 413 aaKnown RBP10.4□□□□□ -0.74
SNCA-211ENST00000508895 TTC22Q5TAA0 569 aa10.4□□□□□ -0.74
SNCA-211ENST00000508895 ZNF333Q96JL9 665 aa10.4□□□□□ -0.74
SNCA-211ENST00000508895 TRIM34Q9BYJ4 488 aa10.4□□□□□ -0.74
SNCA-211ENST00000508895 ATP8A2Q9NTI2 1148 aa10.4□□□□□ -0.74
SNCA-211ENST00000508895 A0A0G2JMZ2 1700 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 ZNFX1Q9P2E3 1918 aaKnown RBP10.39□□□□□ -0.75
SNCA-211ENST00000508895 A0A0D9SFI3 127 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 MPHOSPH10O00566 681 aaKnown RBP10.39□□□□□ -0.75
SNCA-211ENST00000508895 FMNL1O95466 1100 aaPredicted RBP10.39□□□□□ -0.75
SNCA-211ENST00000508895 ELNP15502 786 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 VCAM1P19320 739 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 RASA1P20936 1047 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 HERVK_113P62684 666 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 TRIM32Q13049 653 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 USP17L2Q6R6M4 530 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 ZNF589Q86UQ0 364 aaPredicted RBP10.39□□□□□ -0.75
SNCA-211ENST00000508895 CERS3Q8IU89 383 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 C12orf42Q96LP6 360 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 FSD1Q9BTV5 496 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 PORCNQ9H237 461 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 IL25Q9H293 177 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 AS3MTQ9HBK9 375 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 BTBD7Q9P203 1132 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 GJD2Q9UKL4 321 aa10.39□□□□□ -0.75
SNCA-211ENST00000508895 MYPNQ86TC9 1320 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 MINDY4BA8MYZ0 360 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 C19orf81C9J6K1 198 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 PRDM1O75626 825 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 FLT3LGP49771 235 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 FAM110CQ1W6H9 321 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 SBK1Q52WX2 424 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 ZSCAN25Q6NSZ9 544 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 IFNL3Q8IZI9 196 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 SMCR8Q8TEV9 937 aaPredicted RBP10.38□□□□□ -0.75
SNCA-211ENST00000508895 EVI5LQ96CN4 794 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 SHISA4Q96DD7 197 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 TBC1D2Q9BYX2 928 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 KIAA1683Q9H0B3 1180 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 GINM1Q9NU53 330 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 MORF4L1Q9UBU8 362 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 ROBO3Q96MS0 1386 aa10.38□□□□□ -0.75
SNCA-211ENST00000508895 SPDYE16A6NNV3 312 aaPredicted RBP10.37□□□□□ -0.75
SNCA-211ENST00000508895 FCGRTP55899 365 aa10.37□□□□□ -0.75
SNCA-211ENST00000508895 NMIQ13287 307 aaPredicted RBP10.37□□□□□ -0.75
SNCA-211ENST00000508895 CATSPERGQ6ZRH7 1159 aa10.37□□□□□ -0.75
SNCA-211ENST00000508895 RASGRP2Q7LDG7 609 aa10.37□□□□□ -0.75
SNCA-211ENST00000508895 SPICE1Q8N0Z3 855 aa10.37□□□□□ -0.75
SNCA-211ENST00000508895 PAGR1Q9BTK6 254 aa10.37□□□□□ -0.75
SNCA-211ENST00000508895 NBPF3Q9H094 633 aa10.37□□□□□ -0.75
SNCA-211ENST00000508895 RPAP3Q9H6T3 665 aaPredicted RBP10.37□□□□□ -0.75
SNCA-211ENST00000508895 TMOD4Q9NZQ9 345 aa10.37□□□□□ -0.75
SNCA-211ENST00000508895 ALPK3Q96L96 1907 aa10.37□□□□□ -0.75
SNCA-211ENST00000508895 IGKV6D-41A0A0C4DH26 115 aa10.36□□□□□ -0.75
SNCA-211ENST00000508895 TRIM6-TRIM34B2RNG4 842 aa10.36□□□□□ -0.75
SNCA-211ENST00000508895 PATL2C9JE40 543 aaKnown RBP10.36□□□□□ -0.75
SNCA-211ENST00000508895 ZFYP08048 801 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms