RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 C17orf99Q6UX52 265 aa12.63□□□□□ -0.39
POLR2J3-213ENST00000508848 DSCC1Q9BVC3 393 aa12.63□□□□□ -0.39
POLR2J3-213ENST00000508848 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
POLR2J3-213ENST00000508848 TRIM75PA6NK02 468 aa12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 FKTNO75072 461 aa12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 TBC1D8O95759 1140 aa12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 CYP2D6P10635 497 aa12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 CHMLP26374 656 aa12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 GCLCP48506 637 aaPredicted RBP12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 PPARAQ07869 468 aa12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 ZNF444Q8N0Y2 327 aaPredicted RBP12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 LPAR1Q92633 364 aa12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 MKL1Q969V6 931 aa12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 DYNLL2Q96FJ2 89 aa12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 PARK7Q99497 189 aaKnown RBP12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 SH2D4AQ9H788 454 aa12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 MKNK2Q9HBH9 465 aa12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 NYAP2Q9P242 653 aa12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 CTNNA3Q9UI47 895 aa12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 TMX2Q9Y320 296 aa12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 ADGRA2Q96PE1 1338 aa12.62□□□□□ -0.39
POLR2J3-213ENST00000508848 MINDY4BA8MYZ0 360 aa12.61□□□□□ -0.39
POLR2J3-213ENST00000508848 ORC4O43929 436 aa12.61□□□□□ -0.39
POLR2J3-213ENST00000508848 RASA1P20936 1047 aa12.61□□□□□ -0.39
POLR2J3-213ENST00000508848 NOVP48745 357 aa12.61□□□□□ -0.39
POLR2J3-213ENST00000508848 SP3Q02447 781 aa12.61□□□□□ -0.39
POLR2J3-213ENST00000508848 SIAH1Q8IUQ4 282 aa12.61□□□□□ -0.39
POLR2J3-213ENST00000508848 NEDD1Q8NHV4 660 aa12.61□□□□□ -0.39
POLR2J3-213ENST00000508848 GTF3C2Q8WUA4 911 aaPredicted RBP12.61□□□□□ -0.39
POLR2J3-213ENST00000508848 ZNF296Q8WUU4 475 aaPredicted RBP12.61□□□□□ -0.39
POLR2J3-213ENST00000508848 ERO1AQ96HE7 468 aa12.61□□□□□ -0.39
POLR2J3-213ENST00000508848 TMOD4Q9NZQ9 345 aa12.61□□□□□ -0.39
POLR2J3-213ENST00000508848 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.61□□□□□ -0.39
POLR2J3-213ENST00000508848 PLIN4Q96Q06 1357 aa12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 CYP2D7A0A087X1C5 515 aa12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 IGKV6D-41A0A0C4DH26 115 aa12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 GDF11O95390 407 aa12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 BCRP11274 1271 aa12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 OSBPP22059 807 aa12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 HMGCS2P54868 508 aa12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 SEPT2Q15019 361 aa12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 COL13A1Q5TAT6 717 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 VPS53Q5VIR6 699 aa12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 CWC27Q6UX04 472 aaKnown RBP12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 LBX2Q6XYB7 198 aa12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 ZNF589Q86UQ0 364 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 SLC44A5Q8NCS7 719 aa12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 R3HDMLQ9H3Y0 253 aa12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 ARHGEF10LQ9HCE6 1279 aa12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 EMILIN3Q9NT22 766 aa12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 TCP11L1Q9NUJ3 509 aa12.6□□□□□ -0.39
POLR2J3-213ENST00000508848 MYH4Q9Y623 1939 aa12.59□□□□□ -0.39
POLR2J3-213ENST00000508848 PRMT2P55345 433 aa12.59□□□□□ -0.39
POLR2J3-213ENST00000508848 EVX2Q03828 476 aa12.59□□□□□ -0.39
POLR2J3-213ENST00000508848 MTMR2Q13614 643 aa12.59□□□□□ -0.39
POLR2J3-213ENST00000508848 RAB3GAP1Q15042 981 aa12.59□□□□□ -0.39
POLR2J3-213ENST00000508848 GADL1Q6ZQY3 521 aa12.59□□□□□ -0.39
POLR2J3-213ENST00000508848 CCDC129Q6ZRS4 1044 aa12.59□□□□□ -0.39
POLR2J3-213ENST00000508848 RNF41Q9H4P4 317 aaPredicted RBP12.59□□□□□ -0.39
POLR2J3-213ENST00000508848 MYPNQ86TC9 1320 aa12.59□□□□□ -0.39
POLR2J3-213ENST00000508848 LAMA4Q16363 1823 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 USP17L15C9J2P7 530 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 USP17L13C9JLJ4 530 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 USP17L11C9JVI0 530 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 USP17L18D6R9N7 530 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 USP17L22D6RA61 530 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 USP17L17D6RBQ6 530 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 USP17L19D6RCP7 530 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 USP17L20D6RJB6 530 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 SGSM2O43147 1006 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 MGAMO43451 1857 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 CAPN15O75808 1086 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 AKR1B1P15121 316 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 USP17L24Q0WX57 530 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 SLC4A8Q2Y0W8 1093 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 CATSPERGQ6ZRH7 1159 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 CTU1Q7Z7A3 348 aaKnown RBP12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 DOCK3Q8IZD9 2030 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 TTC14Q96N46 770 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 ASCC2Q9H1I8 757 aaPredicted RBP12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 MTMR4Q9NYA4 1195 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 HOXC10Q9NYD6 342 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 MORF4L1Q9UBU8 362 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 TSKSQ9UJT2 592 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 RLFQ13129 1914 aa12.58□□□□□ -0.4
POLR2J3-213ENST00000508848 A0A1W2PRG0 241 aa12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 SMIM22K7EJ46 135 aa12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 MPHOSPH10O00566 681 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 ZNF213O14771 459 aa12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 LACTBP83111 547 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 ICA1Q05084 483 aa12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 FAM110CQ1W6H9 321 aa12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 SHROOM1Q2M3G4 852 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 CCDC178Q5BJE1 867 aa12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 AKNAD1Q5T1N1 836 aa12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 TREML2Q5T2D2 321 aa12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 CCDC84Q86UT8 332 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 ACER1Q8TDN7 264 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms