RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TNNT3P45378 269 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 USP5P45974 858 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 RCAN1P53805 252 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 CABP4P57796 275 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 CHMP4BP1P59074 171 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 FOXO4P98177 505 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 SPAG1Q07617 926 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 SSRP1Q08945 709 aaKnown RBP5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 POSTNQ15063 836 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 PTPAQ15257 358 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 WHAMMP3Q1A5X7 153 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 CCDC57Q2TAC2 916 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 MAP9Q49MG5 647 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 NT5DC1Q5TFE4 455 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 BRICD5Q6PL45 260 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 SHC4Q6S5L8 630 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 GIGYF2Q6Y7W6 1299 aaKnown RBP5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 ATG9AQ7Z3C6 839 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 SRGAP1Q7Z6B7 1085 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 ANKLE2Q86XL3 938 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 VPS37DQ86XT2 251 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 CNGA4Q8IV77 575 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 TRIM22Q8IYM9 498 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 CTCFLQ8NI51 663 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 CCDC12Q8WUD4 166 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 THAP11Q96EK4 314 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 ZNF512BQ96KM6 892 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 MTA3Q9BTC8 594 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 PARD6BQ9BYG5 372 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 RASSF4Q9H2L5 321 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 CNNM2Q9H8M5 875 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 EFCC1Q9HA90 598 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 FANCLQ9NW38 375 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 CDC23Q9UJX2 597 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 TTF2Q9UNY4 1162 aaKnown RBP5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 NEDD4P46934 1319 aa5.65□□□□□ -1.51
HMGB3P16-201ENST00000508037 WDR17Q8IZU2 1322 aa5.65□□□□□ -1.51
HMGB3P16-201ENST00000508037 KIF1AQ12756 1690 aa5.65□□□□□ -1.51
HMGB3P16-201ENST00000508037 LAMA4Q16363 1823 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 GOLGA8AA7E2F4 631 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 KIF28PB7ZC32 967 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 SH2B2O14492 632 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 ZBTB43O43298 467 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 HOXA2O43364 376 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 RPS6KA5O75582 802 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 WDHD1O75717 1129 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 FGAP02671 866 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 ATP1A3P13637 1013 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 ZNF18P17022 549 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 XBP1P17861 261 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 MARCKSP29966 332 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 ACTN2P35609 894 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 SLC19A1P41440 591 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 LIFRP42702 1097 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 PLCD1P51178 756 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 FKBP4Q02790 459 aaKnown RBP eCLIP5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 SF3B2Q13435 895 aaKnown RBP5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 PNOCQ13519 176 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 MORC3Q14149 939 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 SART3Q15020 963 aaKnown RBP5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 PPP2R5BQ15173 497 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 ALX1Q15699 326 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 ZSCAN26Q16670 478 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 LONRF2Q1L5Z9 754 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 SPATA1Q5VX52 437 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 OTUD7BQ6GQQ9 843 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 NFXL1Q6ZNB6 911 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 LRP10Q7Z4F1 713 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 SGMS1Q86VZ5 419 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 TMEM139Q8IV31 216 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 NOSTRINQ8IVI9 506 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 TMTC2Q8N394 836 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 NFATC2IPQ8NCF5 419 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 MSANTD4Q8NCY6 345 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 EHBP1Q8NDI1 1231 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 FAM71BQ8TC56 605 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 OSBP2Q969R2 916 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 ZNF496Q96IT1 587 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 RPGRIP1Q96KN7 1286 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 MAP3K14Q99558 947 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 FUT8Q9BYC5 575 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 KRT23Q9C075 422 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 HSD3B7Q9H2F3 369 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 FOXP1Q9H334 677 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 SLC24A3Q9HC58 644 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 MED4Q9NPJ6 270 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 NLRP2Q9NX02 1062 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 RAB21Q9UL25 225 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 NFE2L3Q9Y4A8 694 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 PCDHA5Q9Y5H7 936 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 MROH7-TTC4A0A0A0MT08 1334 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 ITIH6Q6UXX5 1313 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 SCN11AQ9UI33 1791 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 AFDNP55196 1824 aaKnown RBP5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 NID2Q14112 1375 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 KDM6AO15550 1401 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 ATRNO75882 1429 aa5.64□□□□□ -1.51
HMGB3P16-201ENST00000508037 LAMB4A4D0S4 1761 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 ARFGEF2Q9Y6D5 1785 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms