RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 USP17L22D6RA61 530 aa25.15■■□□□ 1.62
CLDND1-216ENST00000507944 USP17L17D6RBQ6 530 aa25.15■■□□□ 1.62
CLDND1-216ENST00000507944 USP17L19D6RCP7 530 aa25.15■■□□□ 1.62
CLDND1-216ENST00000507944 USP17L20D6RJB6 530 aa25.15■■□□□ 1.62
CLDND1-216ENST00000507944 USP17L24Q0WX57 530 aa25.15■■□□□ 1.62
CLDND1-216ENST00000507944 Q3C1V9 767 aa25.15■■□□□ 1.62
CLDND1-216ENST00000507944 UBE2Q1Q7Z7E8 422 aa25.15■■□□□ 1.62
CLDND1-216ENST00000507944 PRKAB2O43741 272 aa25.14■■□□□ 1.62
CLDND1-216ENST00000507944 MBD4O95243 580 aa25.14■■□□□ 1.62
CLDND1-216ENST00000507944 GUCY1A2P33402 732 aa25.14■■□□□ 1.62
CLDND1-216ENST00000507944 DEFB118Q96PH6 123 aa25.14■■□□□ 1.62
CLDND1-216ENST00000507944 PAGR1Q9BTK6 254 aa25.14■■□□□ 1.62
CLDND1-216ENST00000507944 TFRCP02786 760 aaKnown RBP25.13■■□□□ 1.61
CLDND1-216ENST00000507944 HMGCRP04035 888 aa25.13■■□□□ 1.61
CLDND1-216ENST00000507944 CYP2D6P10635 497 aa25.13■■□□□ 1.61
CLDND1-216ENST00000507944 ERVK-9P63128 1117 aa25.13■■□□□ 1.61
CLDND1-216ENST00000507944 ERVK-24P63145 666 aa25.13■■□□□ 1.61
CLDND1-216ENST00000507944 SEPT2Q15019 361 aa25.13■■□□□ 1.61
CLDND1-216ENST00000507944 UBE3CQ15386 1083 aa25.13■■□□□ 1.61
CLDND1-216ENST00000507944 POTEEQ6S8J3 1075 aa25.13■■□□□ 1.61
CLDND1-216ENST00000507944 DCTPP1Q9H773 170 aa25.13■■□□□ 1.61
CLDND1-216ENST00000507944 PAK6Q9NQU5 681 aaPredicted RBP25.13■■□□□ 1.61
CLDND1-216ENST00000507944 ATP8A2Q9NTI2 1148 aa25.13■■□□□ 1.61
CLDND1-216ENST00000507944 PLXNB2O15031 1838 aa25.12■■□□□ 1.61
CLDND1-216ENST00000507944 MYH7P12883 1935 aa25.12■■□□□ 1.61
CLDND1-216ENST00000507944 MPHOSPH10O00566 681 aaKnown RBP25.12■■□□□ 1.61
CLDND1-216ENST00000507944 CAPN2P17655 700 aa25.12■■□□□ 1.61
CLDND1-216ENST00000507944 MAPK4P31152 587 aa25.12■■□□□ 1.61
CLDND1-216ENST00000507944 CATSPERGQ6ZRH7 1159 aa25.12■■□□□ 1.61
CLDND1-216ENST00000507944 CCAR1Q8IX12 1150 aaKnown RBP25.12■■□□□ 1.61
CLDND1-216ENST00000507944 DPF3Q92784 378 aa25.12■■□□□ 1.61
CLDND1-216ENST00000507944 NUDT12Q9BQG2 462 aa25.12■■□□□ 1.61
CLDND1-216ENST00000507944 BAZ2AQ9UIF9 1905 aaKnown RBP25.12■■□□□ 1.61
CLDND1-216ENST00000507944 FARP2O94887 1054 aaPredicted RBP25.11■■□□□ 1.61
CLDND1-216ENST00000507944 CHGBP05060 677 aa25.11■■□□□ 1.61
CLDND1-216ENST00000507944 VCAM1P19320 739 aa25.11■■□□□ 1.61
CLDND1-216ENST00000507944 CYP2B6P20813 491 aa25.11■■□□□ 1.61
CLDND1-216ENST00000507944 HABP4Q5JVS0 413 aaKnown RBP25.11■■□□□ 1.61
CLDND1-216ENST00000507944 ZSCAN25Q6NSZ9 544 aa25.11■■□□□ 1.61
CLDND1-216ENST00000507944 HTATIP2Q9BUP3 242 aa25.11■■□□□ 1.61
CLDND1-216ENST00000507944 PORCNQ9H237 461 aa25.11■■□□□ 1.61
CLDND1-216ENST00000507944 ECHDC1Q9NTX5 307 aa25.11■■□□□ 1.61
CLDND1-216ENST00000507944 SWAP70Q9UH65 585 aa25.11■■□□□ 1.61
CLDND1-216ENST00000507944 RABGAP1Q9Y3P9 1069 aa25.11■■□□□ 1.61
CLDND1-216ENST00000507944 H0YGN5 161 aa25.1■■□□□ 1.61
CLDND1-216ENST00000507944 SLC44A5Q8NCS7 719 aa25.1■■□□□ 1.61
CLDND1-216ENST00000507944 SOCS4Q8WXH5 440 aa25.1■■□□□ 1.61
CLDND1-216ENST00000507944 DYNLL2Q96FJ2 89 aa25.1■■□□□ 1.61
CLDND1-216ENST00000507944 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.1■■□□□ 1.61
CLDND1-216ENST00000507944 TRIM32Q13049 653 aa25.09■■□□□ 1.61
CLDND1-216ENST00000507944 CRISPLD2Q9H0B8 497 aa25.09■■□□□ 1.61
CLDND1-216ENST00000507944 MYH8P13535 1937 aa25.08■■□□□ 1.61
CLDND1-216ENST00000507944 CNMDO75829 334 aa25.08■■□□□ 1.61
CLDND1-216ENST00000507944 XRCC5P13010 732 aaKnown RBP25.08■■□□□ 1.61
CLDND1-216ENST00000507944 TMEM179Q6ZVK1 233 aa25.08■■□□□ 1.61
CLDND1-216ENST00000507944 GPR142Q7Z601 462 aa25.08■■□□□ 1.61
CLDND1-216ENST00000507944 PLEKHH3Q7Z736 793 aa25.08■■□□□ 1.61
CLDND1-216ENST00000507944 TRIB2Q92519 343 aa25.08■■□□□ 1.61
CLDND1-216ENST00000507944 RPAP3Q9H6T3 665 aaPredicted RBP25.08■■□□□ 1.61
CLDND1-216ENST00000507944 HMX1Q9NP08 348 aaPredicted RBP25.08■■□□□ 1.61
CLDND1-216ENST00000507944 RPTORQ8N122 1335 aa25.08■■□□□ 1.6
CLDND1-216ENST00000507944 A0A1W2PRG0 241 aa25.07■■□□□ 1.6
CLDND1-216ENST00000507944 USP17L12C9JPN9 530 aa25.07■■□□□ 1.6
CLDND1-216ENST00000507944 USP17L21D6R901 530 aa25.07■■□□□ 1.6
CLDND1-216ENST00000507944 CCNA1P78396 465 aa25.07■■□□□ 1.6
CLDND1-216ENST00000507944 C12orf60Q5U649 245 aa25.07■■□□□ 1.6
CLDND1-216ENST00000507944 AMOTL1Q8IY63 956 aa25.07■■□□□ 1.6
CLDND1-216ENST00000507944 DDRGK1Q96HY6 314 aa25.07■■□□□ 1.6
CLDND1-216ENST00000507944 PUS7LQ9H0K6 701 aaKnown RBP25.07■■□□□ 1.6
CLDND1-216ENST00000507944 SLC4A4Q9Y6R1 1079 aa25.07■■□□□ 1.6
CLDND1-216ENST00000507944 CYP2D7A0A087X1C5 515 aa25.06■■□□□ 1.6
CLDND1-216ENST00000507944 LBX2Q6XYB7 198 aa25.06■■□□□ 1.6
CLDND1-216ENST00000507944 USP6NLQ92738 828 aa25.06■■□□□ 1.6
CLDND1-216ENST00000507944 GPATCH3Q96I76 525 aa25.06■■□□□ 1.6
CLDND1-216ENST00000507944 CWC22Q9HCG8 908 aaKnown RBP25.06■■□□□ 1.6
CLDND1-216ENST00000507944 TRIOBPQ9H2D6 2365 aa25.06■■□□□ 1.6
CLDND1-216ENST00000507944 SMIM22K7EJ46 135 aa25.05■■□□□ 1.6
CLDND1-216ENST00000507944 CDK8P49336 464 aa25.05■■□□□ 1.6
CLDND1-216ENST00000507944 MORN1Q5T089 497 aa25.05■■□□□ 1.6
CLDND1-216ENST00000507944 TRMT44Q8IYL2 757 aaKnown RBP25.05■■□□□ 1.6
CLDND1-216ENST00000507944 CCDC17Q96LX7 622 aa25.05■■□□□ 1.6
CLDND1-216ENST00000507944 COLQQ9Y215 455 aaPredicted RBP25.05■■□□□ 1.6
CLDND1-216ENST00000507944 SPDYE16A6NNV3 312 aaPredicted RBP25.04■■□□□ 1.6
CLDND1-216ENST00000507944 AKR1B1P15121 316 aa25.04■■□□□ 1.6
CLDND1-216ENST00000507944 RGS2P41220 211 aa25.04■■□□□ 1.6
CLDND1-216ENST00000507944 BTBD7Q9P203 1132 aa25.04■■□□□ 1.6
CLDND1-216ENST00000507944 GLRX3O76003 335 aaKnown RBP25.03■■□□□ 1.6
CLDND1-216ENST00000507944 ZKSCAN1P17029 563 aaPredicted RBP25.03■■□□□ 1.6
CLDND1-216ENST00000507944 COG2Q14746 738 aa25.03■■□□□ 1.6
CLDND1-216ENST00000507944 MAP3K21Q5TCX8 1036 aa25.03■■□□□ 1.6
CLDND1-216ENST00000507944 C16orf86Q6ZW13 317 aa25.03■■□□□ 1.6
CLDND1-216ENST00000507944 SIAH1Q8IUQ4 282 aa25.03■■□□□ 1.6
CLDND1-216ENST00000507944 KBTBD3Q8NAB2 608 aa25.03■■□□□ 1.6
CLDND1-216ENST00000507944 PAWRQ96IZ0 340 aaKnown RBP25.03■■□□□ 1.6
CLDND1-216ENST00000507944 HOXC10Q9NYD6 342 aa25.03■■□□□ 1.6
CLDND1-216ENST00000507944 PCDHB15Q9Y5E8 787 aa25.03■■□□□ 1.6
CLDND1-216ENST00000507944 NR2E3Q9Y5X4 410 aa25.03■■□□□ 1.6
CLDND1-216ENST00000507944 PRKAR2AP13861 404 aaKnown RBP25.02■■□□□ 1.6
CLDND1-216ENST00000507944 MAP2K5Q13163 448 aa25.02■■□□□ 1.6
CLDND1-216ENST00000507944 WDR78Q5VTH9 848 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms