RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 GPR161Q8N6U8 529 aaKnown RBP7.43□□□□□ -1.22
VEGFC-201ENST00000507638 ZDHHC1Q8WTX9 485 aa7.43□□□□□ -1.22
VEGFC-201ENST00000507638 SCG3Q8WXD2 468 aaKnown RBP7.43□□□□□ -1.22
VEGFC-201ENST00000507638 VTI1AQ96AJ9 217 aa7.43□□□□□ -1.22
VEGFC-201ENST00000507638 SEMA6BQ9H3T3 888 aa7.43□□□□□ -1.22
VEGFC-201ENST00000507638 ENAMQ9NRM1 1142 aa7.43□□□□□ -1.22
VEGFC-201ENST00000507638 ASTN2O75129 1339 aaPredicted RBP7.43□□□□□ -1.22
VEGFC-201ENST00000507638 ALPK3Q96L96 1907 aa7.42□□□□□ -1.22
VEGFC-201ENST00000507638 TCF20Q9UGU0 1960 aaKnown RBP7.42□□□□□ -1.22
VEGFC-201ENST00000507638 ATXN7O15265 892 aaPredicted RBP7.42□□□□□ -1.22
VEGFC-201ENST00000507638 GJB1P08034 283 aa7.42□□□□□ -1.22
VEGFC-201ENST00000507638 SYN1P17600 705 aa7.42□□□□□ -1.22
VEGFC-201ENST00000507638 PDE4CQ08493 712 aa7.42□□□□□ -1.22
VEGFC-201ENST00000507638 CRHR2Q13324 411 aa7.42□□□□□ -1.22
VEGFC-201ENST00000507638 TCIRG1Q13488 830 aa7.42□□□□□ -1.22
VEGFC-201ENST00000507638 PRAMEF18Q5VWM3 479 aa7.42□□□□□ -1.22
VEGFC-201ENST00000507638 RHPN1Q8TCX5 695 aa7.42□□□□□ -1.22
VEGFC-201ENST00000507638 DPF2Q92785 391 aa7.42□□□□□ -1.22
VEGFC-201ENST00000507638 CNTNAP3BQ96NU0 1288 aa7.42□□□□□ -1.22
VEGFC-201ENST00000507638 UHRF1Q96T88 793 aaPredicted RBP7.42□□□□□ -1.22
VEGFC-201ENST00000507638 CNTNAP3Q9BZ76 1288 aa7.42□□□□□ -1.22
VEGFC-201ENST00000507638 VPS33BQ9H267 617 aa7.42□□□□□ -1.22
VEGFC-201ENST00000507638 AVENQ9NQS1 362 aaPredicted RBP7.42□□□□□ -1.22
VEGFC-201ENST00000507638 GGA3Q9NZ52 723 aa7.42□□□□□ -1.22
VEGFC-201ENST00000507638 WASHC2AQ641Q2 1341 aa7.42□□□□□ -1.22
VEGFC-201ENST00000507638 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.41□□□□□ -1.22
VEGFC-201ENST00000507638 ST20-MTHFSA0A0A6YYL1 179 aa7.41□□□□□ -1.22
VEGFC-201ENST00000507638 IGF2BP3O00425 579 aaKnown RBP eCLIP7.41□□□□□ -1.22
VEGFC-201ENST00000507638 MTHFSP49914 203 aa7.41□□□□□ -1.22
VEGFC-201ENST00000507638 PTPN12Q05209 780 aaKnown RBP7.41□□□□□ -1.22
VEGFC-201ENST00000507638 RTN1Q16799 776 aa7.41□□□□□ -1.22
VEGFC-201ENST00000507638 ZCCHC2Q9C0B9 1178 aaKnown RBP7.41□□□□□ -1.22
VEGFC-201ENST00000507638 EPHX3Q9H6B9 360 aa7.41□□□□□ -1.22
VEGFC-201ENST00000507638 NDFIP2Q9NV92 336 aa7.41□□□□□ -1.22
VEGFC-201ENST00000507638 TERF2IPQ9NYB0 399 aa7.41□□□□□ -1.22
VEGFC-201ENST00000507638 GDF2Q9UK05 429 aaPredicted RBP7.41□□□□□ -1.22
VEGFC-201ENST00000507638 SCAF8Q9UPN6 1271 aaKnown RBP7.41□□□□□ -1.22
VEGFC-201ENST00000507638 USP3Q9Y6I4 520 aa7.41□□□□□ -1.22
VEGFC-201ENST00000507638 ZNF646O15015 1829 aaPredicted RBP7.41□□□□□ -1.22
VEGFC-201ENST00000507638 MANSC4A6NHS7 340 aaPredicted RBP7.4□□□□□ -1.22
VEGFC-201ENST00000507638 FAM177BA6PVY3 158 aa7.4□□□□□ -1.22
VEGFC-201ENST00000507638 FOSL2P15408 326 aa7.4□□□□□ -1.22
VEGFC-201ENST00000507638 MAP3K10Q02779 954 aa7.4□□□□□ -1.22
VEGFC-201ENST00000507638 UBAP2LQ14157 1087 aaKnown RBP7.4□□□□□ -1.22
VEGFC-201ENST00000507638 GAS6Q14393 721 aa7.4□□□□□ -1.22
VEGFC-201ENST00000507638 IER5Q5VY09 327 aa7.4□□□□□ -1.22
VEGFC-201ENST00000507638 TPTE2Q6XPS3 522 aa7.4□□□□□ -1.22
VEGFC-201ENST00000507638 C7orf61Q8IZ16 206 aa7.4□□□□□ -1.22
VEGFC-201ENST00000507638 USP38Q8NB14 1042 aa7.4□□□□□ -1.22
VEGFC-201ENST00000507638 RNF208Q9H0X6 261 aa7.4□□□□□ -1.22
VEGFC-201ENST00000507638 C11orf16Q9NQ32 467 aa7.4□□□□□ -1.22
VEGFC-201ENST00000507638 TAF1P21675 1872 aa7.39□□□□□ -1.23
VEGFC-201ENST00000507638 YDJCA8MPS7 323 aa7.39□□□□□ -1.23
VEGFC-201ENST00000507638 KRT37O76014 449 aa7.39□□□□□ -1.23
VEGFC-201ENST00000507638 CAMTA2O94983 1202 aa7.39□□□□□ -1.23
VEGFC-201ENST00000507638 CCL5P13501 91 aa7.39□□□□□ -1.23
VEGFC-201ENST00000507638 FGFR3P22607 806 aa7.39□□□□□ -1.23
VEGFC-201ENST00000507638 TXLNAP40222 546 aa7.39□□□□□ -1.23
VEGFC-201ENST00000507638 KRT76Q01546 638 aa7.39□□□□□ -1.23
VEGFC-201ENST00000507638 SLC39A6Q13433 755 aa7.39□□□□□ -1.23
VEGFC-201ENST00000507638 KIF4BQ2VIQ3 1234 aa7.39□□□□□ -1.23
VEGFC-201ENST00000507638 TMEM31Q5JXX7 168 aa7.39□□□□□ -1.23
VEGFC-201ENST00000507638 RNFT1Q5M7Z0 435 aa7.39□□□□□ -1.23
VEGFC-201ENST00000507638 ANGEL2Q5VTE6 544 aaKnown RBP7.39□□□□□ -1.23
VEGFC-201ENST00000507638 ALDH16A1Q8IZ83 802 aa7.39□□□□□ -1.23
VEGFC-201ENST00000507638 U2AF1L4Q8WU68 220 aaKnown RBP7.39□□□□□ -1.23
VEGFC-201ENST00000507638 CLP1Q92989 425 aaKnown RBP7.39□□□□□ -1.23
VEGFC-201ENST00000507638 ASB2Q96Q27 587 aa7.39□□□□□ -1.23
VEGFC-201ENST00000507638 PHACTR1Q9C0D0 580 aa7.39□□□□□ -1.23
VEGFC-201ENST00000507638 NCAPD2Q15021 1401 aa7.38□□□□□ -1.23
VEGFC-201ENST00000507638 FLT4P35916 1363 aa7.38□□□□□ -1.23
VEGFC-201ENST00000507638 PSMD14O00487 310 aa7.38□□□□□ -1.23
VEGFC-201ENST00000507638 BMP4P12644 408 aa7.38□□□□□ -1.23
VEGFC-201ENST00000507638 PRKG1Q13976 671 aa7.38□□□□□ -1.23
VEGFC-201ENST00000507638 TBCELQ5QJ74 424 aa7.38□□□□□ -1.23
VEGFC-201ENST00000507638 OTUD7BQ6GQQ9 843 aa7.38□□□□□ -1.23
VEGFC-201ENST00000507638 GOLGA6L1Q8N7Z2 621 aa7.38□□□□□ -1.23
VEGFC-201ENST00000507638 ATXN2LQ8WWM7 1075 aaKnown RBP7.38□□□□□ -1.23
VEGFC-201ENST00000507638 MYO19Q96H55 970 aa7.38□□□□□ -1.23
VEGFC-201ENST00000507638 GGNBP2Q9H3C7 697 aa7.38□□□□□ -1.23
VEGFC-201ENST00000507638 ZMIZ1Q9ULJ6 1067 aa7.38□□□□□ -1.23
VEGFC-201ENST00000507638 BDP1A6H8Y1 2624 aa7.37□□□□□ -1.23
VEGFC-201ENST00000507638 PKD1L2Q7Z442 2459 aa7.37□□□□□ -1.23
VEGFC-201ENST00000507638 PPM1GO15355 546 aaPredicted RBP7.37□□□□□ -1.23
VEGFC-201ENST00000507638 BNIP3LO60238 219 aa7.37□□□□□ -1.23
VEGFC-201ENST00000507638 SGPL1O95470 568 aa7.37□□□□□ -1.23
VEGFC-201ENST00000507638 TFRCP02786 760 aaKnown RBP7.37□□□□□ -1.23
VEGFC-201ENST00000507638 THBS1P07996 1170 aa7.37□□□□□ -1.23
VEGFC-201ENST00000507638 TNP2Q05952 138 aa7.37□□□□□ -1.23
VEGFC-201ENST00000507638 PLEKHO1Q53GL0 409 aaPredicted RBP7.37□□□□□ -1.23
VEGFC-201ENST00000507638 CDCA8Q53HL2 280 aa7.37□□□□□ -1.23
VEGFC-201ENST00000507638 ZNF530Q6P9A1 599 aaPredicted RBP7.37□□□□□ -1.23
VEGFC-201ENST00000507638 SUPT20HQ8NEM7 779 aa7.37□□□□□ -1.23
VEGFC-201ENST00000507638 PAWRQ96IZ0 340 aaKnown RBP7.37□□□□□ -1.23
VEGFC-201ENST00000507638 NECAB3Q96P71 396 aaPredicted RBP7.37□□□□□ -1.23
VEGFC-201ENST00000507638 MARK1Q9P0L2 795 aa7.37□□□□□ -1.23
VEGFC-201ENST00000507638 RNF225M0QZC1 329 aaPredicted RBP7.36□□□□□ -1.23
VEGFC-201ENST00000507638 EFSO43281 561 aa7.36□□□□□ -1.23
VEGFC-201ENST00000507638 STARD3NLO95772 234 aa7.36□□□□□ -1.23
VEGFC-201ENST00000507638 ARAFP10398 606 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms