RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 TSR2Q969E8 191 aaKnown RBP6.48□□□□□ -1.37
CLDND1-212ENST00000506885 FMNL2Q96PY5 1086 aa6.48□□□□□ -1.37
CLDND1-212ENST00000506885 MAF1Q9H063 256 aa6.48□□□□□ -1.37
CLDND1-212ENST00000506885 LEMD3Q9Y2U8 911 aa6.48□□□□□ -1.37
CLDND1-212ENST00000506885 SMAD7O15105 426 aaKnown RBP6.47□□□□□ -1.37
CLDND1-212ENST00000506885 NME2P22392 152 aa6.47□□□□□ -1.37
CLDND1-212ENST00000506885 ARNTP27540 789 aa6.47□□□□□ -1.37
CLDND1-212ENST00000506885 GNALP38405 381 aa6.47□□□□□ -1.37
CLDND1-212ENST00000506885 CDKN1CP49918 316 aaPredicted RBP6.47□□□□□ -1.37
CLDND1-212ENST00000506885 OS9Q13438 667 aaPredicted RBP6.47□□□□□ -1.37
CLDND1-212ENST00000506885 FAM50AQ14320 339 aaKnown RBP6.47□□□□□ -1.37
CLDND1-212ENST00000506885 NFKBIBQ15653 356 aa6.47□□□□□ -1.37
CLDND1-212ENST00000506885 SGO2Q562F6 1265 aa6.47□□□□□ -1.37
CLDND1-212ENST00000506885 BRDTQ58F21 947 aaPredicted RBP6.47□□□□□ -1.37
CLDND1-212ENST00000506885 TNNI3KQ59H18 835 aa6.47□□□□□ -1.37
CLDND1-212ENST00000506885 ZFYVE27Q5T4F4 411 aa6.47□□□□□ -1.37
CLDND1-212ENST00000506885 SCARA3Q6AZY7 606 aa6.47□□□□□ -1.37
CLDND1-212ENST00000506885 DYMQ7RTS9 669 aa6.47□□□□□ -1.37
CLDND1-212ENST00000506885 SRRTQ9BXP5 876 aaKnown RBP6.47□□□□□ -1.37
CLDND1-212ENST00000506885 KRTAP4-5Q9BYR2 181 aa6.47□□□□□ -1.37
CLDND1-212ENST00000506885 MINDY4BA8MYZ0 360 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 F6X3S4 739 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 PDPK1O15530 556 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 CNGA1P29973 690 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 GBP2P32456 591 aaPredicted RBP6.46□□□□□ -1.38
CLDND1-212ENST00000506885 ZNF157P51786 506 aaPredicted RBP6.46□□□□□ -1.38
CLDND1-212ENST00000506885 RASGRF1Q13972 1273 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 C2orf27AQ580R0 203 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 C11orf96Q7Z7L8 435 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 JAMLQ86YT9 394 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 SULF2Q8IWU5 870 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 CELF2-AS1Q8N7Q2 184 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 C3orf58Q8NDZ4 430 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 ZNF296Q8WUU4 475 aaPredicted RBP6.46□□□□□ -1.38
CLDND1-212ENST00000506885 TMEM74Q96NL1 305 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 METTL22Q9BUU2 404 aaPredicted RBP6.46□□□□□ -1.38
CLDND1-212ENST00000506885 NT5C1AQ9BXI3 368 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 ATXN3LQ9H3M9 355 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 GSX1Q9H4S2 264 aaPredicted RBP6.46□□□□□ -1.38
CLDND1-212ENST00000506885 ATG3Q9NT62 314 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 BSDC1Q9NW68 430 aaPredicted RBP6.46□□□□□ -1.38
CLDND1-212ENST00000506885 PNMA2Q9UL42 364 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 AP4E1Q9UPM8 1137 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 ATP8A1Q9Y2Q0 1164 aa6.46□□□□□ -1.38
CLDND1-212ENST00000506885 CAND2O75155 1236 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 CTSBP07858 339 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 ASPAP45381 313 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 SETQ01105 290 aaPredicted RBP6.45□□□□□ -1.38
CLDND1-212ENST00000506885 SAFB2Q14151 953 aaKnown RBP eCLIP6.45□□□□□ -1.38
CLDND1-212ENST00000506885 LRRC14Q15048 493 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 TCEA2Q15560 299 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 DDR2Q16832 855 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 KIF4BQ2VIQ3 1234 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 PCNX4Q63HM2 1172 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 CDPF1Q6NVV7 123 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 ZDHHC13Q8IUH4 622 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 NME8Q8N427 588 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 PNISRQ8TF01 805 aaKnown RBP6.45□□□□□ -1.38
CLDND1-212ENST00000506885 FBLIM1Q8WUP2 373 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 SHDQ96IW2 340 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 NECAB3Q96P71 396 aaPredicted RBP6.45□□□□□ -1.38
CLDND1-212ENST00000506885 APBA2Q99767 749 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 WDR18Q9BV38 432 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 LAS1LQ9Y4W2 734 aaKnown RBP6.45□□□□□ -1.38
CLDND1-212ENST00000506885 ACTL7BQ9Y614 415 aa6.45□□□□□ -1.38
CLDND1-212ENST00000506885 TSPAN6O43657 245 aa6.44□□□□□ -1.38
CLDND1-212ENST00000506885 ECEL1O95672 775 aa6.44□□□□□ -1.38
CLDND1-212ENST00000506885 CYP27A1Q02318 531 aa6.44□□□□□ -1.38
CLDND1-212ENST00000506885 ID3Q02535 119 aa6.44□□□□□ -1.38
CLDND1-212ENST00000506885 HDAC1Q13547 482 aaPredicted RBP6.44□□□□□ -1.38
CLDND1-212ENST00000506885 NFE2Q16621 373 aaPredicted RBP6.44□□□□□ -1.38
CLDND1-212ENST00000506885 DALRD3Q5D0E6 543 aaKnown RBP6.44□□□□□ -1.38
CLDND1-212ENST00000506885 SHKBP1Q8TBC3 707 aa6.44□□□□□ -1.38
CLDND1-212ENST00000506885 THAP3Q8WTV1 239 aaPredicted RBP6.44□□□□□ -1.38
CLDND1-212ENST00000506885 CCDC86Q9H6F5 360 aaKnown RBP6.44□□□□□ -1.38
CLDND1-212ENST00000506885 ACSS3Q9H6R3 686 aa6.44□□□□□ -1.38
CLDND1-212ENST00000506885 ST7Q9NRC1 585 aa6.44□□□□□ -1.38
CLDND1-212ENST00000506885 PCMTD2Q9NV79 361 aa6.44□□□□□ -1.38
CLDND1-212ENST00000506885 GNL3LQ9NVN8 582 aaKnown RBP6.44□□□□□ -1.38
CLDND1-212ENST00000506885 MAPK8IP1Q9UQF2 711 aa6.44□□□□□ -1.38
CLDND1-212ENST00000506885 PLAAQ9Y263 795 aa6.44□□□□□ -1.38
CLDND1-212ENST00000506885 COL17A1Q9UMD9 1497 aaPredicted RBP6.44□□□□□ -1.38
CLDND1-212ENST00000506885 KCNQ2O43526 872 aa6.43□□□□□ -1.38
CLDND1-212ENST00000506885 ALDH1L1O75891 902 aa6.43□□□□□ -1.38
CLDND1-212ENST00000506885 TRIM37O94972 964 aa6.43□□□□□ -1.38
CLDND1-212ENST00000506885 LIG1P18858 919 aa6.43□□□□□ -1.38
CLDND1-212ENST00000506885 EPHB1P54762 984 aa6.43□□□□□ -1.38
CLDND1-212ENST00000506885 CCDC85BQ15834 202 aaPredicted RBP6.43□□□□□ -1.38
CLDND1-212ENST00000506885 TPTE2Q6XPS3 522 aa6.43□□□□□ -1.38
CLDND1-212ENST00000506885 PDZD3Q86UT5 571 aa6.43□□□□□ -1.38
CLDND1-212ENST00000506885 SYNPOQ8N3V7 929 aa6.43□□□□□ -1.38
CLDND1-212ENST00000506885 IL17RAQ96F46 866 aa6.43□□□□□ -1.38
CLDND1-212ENST00000506885 MFSD14AQ96MC6 490 aa6.43□□□□□ -1.38
CLDND1-212ENST00000506885 MPHOSPH6Q99547 160 aaKnown RBP6.43□□□□□ -1.38
CLDND1-212ENST00000506885 OSBPL1AQ9BXW6 950 aa6.43□□□□□ -1.38
CLDND1-212ENST00000506885 FAM126AQ9BYI3 521 aaPredicted RBP6.43□□□□□ -1.38
CLDND1-212ENST00000506885 PIDD1Q9HB75 910 aa6.43□□□□□ -1.38
CLDND1-212ENST00000506885 KCNQ5Q9NR82 932 aa6.43□□□□□ -1.38
CLDND1-212ENST00000506885 CRIM1Q9NZV1 1036 aa6.43□□□□□ -1.38
CLDND1-212ENST00000506885 CYP8B1Q9UNU6 501 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms