RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 SHDQ96IW2 340 aa4.74□□□□□ -1.65
GYPB-207ENST00000506679 STRIP2Q9ULQ0 834 aa4.74□□□□□ -1.65
GYPB-207ENST00000506679 CEP131Q9UPN4 1083 aa4.74□□□□□ -1.65
GYPB-207ENST00000506679 LEMD3Q9Y2U8 911 aa4.74□□□□□ -1.65
GYPB-207ENST00000506679 UBOX5O94941 541 aa4.73□□□□□ -1.65
GYPB-207ENST00000506679 ACRP10323 421 aa4.73□□□□□ -1.65
GYPB-207ENST00000506679 CCNFP41002 786 aa4.73□□□□□ -1.65
GYPB-207ENST00000506679 GNL2Q13823 731 aaKnown RBP4.73□□□□□ -1.65
GYPB-207ENST00000506679 NAALADL2Q58DX5 795 aa4.73□□□□□ -1.65
GYPB-207ENST00000506679 INTS3Q68E01 1043 aaKnown RBP4.73□□□□□ -1.65
GYPB-207ENST00000506679 ZNF746Q6NUN9 644 aaPredicted RBP4.73□□□□□ -1.65
GYPB-207ENST00000506679 INTS5Q6P9B9 1019 aaKnown RBP4.73□□□□□ -1.65
GYPB-207ENST00000506679 VWCEQ96DN2 955 aa4.73□□□□□ -1.65
GYPB-207ENST00000506679 COX4I2Q96KJ9 171 aa4.73□□□□□ -1.65
GYPB-207ENST00000506679 CCDC74BQ96LY2 380 aa4.73□□□□□ -1.65
GYPB-207ENST00000506679 FERD3LQ96RJ6 166 aa4.73□□□□□ -1.65
GYPB-207ENST00000506679 TM9SF2Q99805 663 aa4.73□□□□□ -1.65
GYPB-207ENST00000506679 SRRTQ9BXP5 876 aaKnown RBP4.73□□□□□ -1.65
GYPB-207ENST00000506679 TNKS2Q9H2K2 1166 aa4.73□□□□□ -1.65
GYPB-207ENST00000506679 PRDM5Q9NQX1 630 aaPredicted RBP4.73□□□□□ -1.65
GYPB-207ENST00000506679 GTF2IRD1Q9UHL9 959 aa4.73□□□□□ -1.65
GYPB-207ENST00000506679 CYP26A1O43174 497 aa4.72□□□□□ -1.65
GYPB-207ENST00000506679 MED26O95402 600 aa4.72□□□□□ -1.65
GYPB-207ENST00000506679 SPINK2P20155 84 aa4.72□□□□□ -1.65
GYPB-207ENST00000506679 POLR2BP30876 1174 aaKnown RBP4.72□□□□□ -1.65
GYPB-207ENST00000506679 ETV3P41162 512 aa4.72□□□□□ -1.65
GYPB-207ENST00000506679 ARID5AQ03989 594 aa4.72□□□□□ -1.65
GYPB-207ENST00000506679 CCDC81Q6ZN84 652 aa4.72□□□□□ -1.65
GYPB-207ENST00000506679 DTX1Q86Y01 620 aa4.72□□□□□ -1.65
GYPB-207ENST00000506679 MCF2L2Q86YR7 1114 aa4.72□□□□□ -1.65
GYPB-207ENST00000506679 C19orf47Q8N9M1 422 aaKnown RBP4.72□□□□□ -1.65
GYPB-207ENST00000506679 OR6P1Q8NGX9 317 aa4.72□□□□□ -1.65
GYPB-207ENST00000506679 BAHD1Q8TBE0 780 aaPredicted RBP4.72□□□□□ -1.65
GYPB-207ENST00000506679 RNF141Q8WVD5 230 aa4.72□□□□□ -1.65
GYPB-207ENST00000506679 SLC9A7Q96T83 725 aa4.72□□□□□ -1.65
GYPB-207ENST00000506679 KIF2CQ99661 725 aa4.72□□□□□ -1.65
GYPB-207ENST00000506679 ZC3H7BQ9UGR2 993 aaKnown RBP4.72□□□□□ -1.65
GYPB-207ENST00000506679 PRR33A8MZF0 331 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 RBAK-RBAKDNI3L0D1 243 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 COBLO75128 1261 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 PRNPP04156 253 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 CEACAM5P06731 702 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 RAG1P15918 1043 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 GRIK1P39086 918 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 EIF6P56537 245 aaKnown RBP4.71□□□□□ -1.66
GYPB-207ENST00000506679 NKPD1Q17RQ9 610 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 SFRP5Q5T4F7 317 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 XP32Q5T750 250 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 CDH24Q86UP0 819 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 VPS37DQ86XT2 251 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 SPACA3Q8IXA5 215 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 PHACTR4Q8IZ21 702 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 FAM169BQ8N8A8 192 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 FAM181AQ8N9Y4 354 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 FBXL18Q96ME1 805 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 KRTAP4-8Q9BYQ9 185 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.71□□□□□ -1.66
GYPB-207ENST00000506679 TPX2Q9ULW0 747 aaKnown RBP4.71□□□□□ -1.66
GYPB-207ENST00000506679 PLAGL2Q9UPG8 496 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 CAPN6Q9Y6Q1 641 aa4.71□□□□□ -1.66
GYPB-207ENST00000506679 CYP7A1P22680 504 aa4.7□□□□□ -1.66
GYPB-207ENST00000506679 GUCY2CP25092 1073 aa4.7□□□□□ -1.66
GYPB-207ENST00000506679 KIR3DL1P43629 444 aa4.7□□□□□ -1.66
GYPB-207ENST00000506679 CASP7P55210 303 aa4.7□□□□□ -1.66
GYPB-207ENST00000506679 LRP8Q14114 963 aa4.7□□□□□ -1.66
GYPB-207ENST00000506679 ZMYM1Q5SVZ6 1142 aa4.7□□□□□ -1.66
GYPB-207ENST00000506679 RUFY4Q6ZNE9 571 aa4.7□□□□□ -1.66
GYPB-207ENST00000506679 WFDC3Q8IUB2 231 aa4.7□□□□□ -1.66
GYPB-207ENST00000506679 TMEM192Q8IY95 271 aa4.7□□□□□ -1.66
GYPB-207ENST00000506679 PLD6Q8N2A8 252 aaKnown RBP4.7□□□□□ -1.66
GYPB-207ENST00000506679 NETO1Q8TDF5 533 aa4.7□□□□□ -1.66
GYPB-207ENST00000506679 Q96M66 194 aa4.7□□□□□ -1.66
GYPB-207ENST00000506679 KREMEN1Q96MU8 473 aa4.7□□□□□ -1.66
GYPB-207ENST00000506679 ASPNQ9BXN1 380 aa4.7□□□□□ -1.66
GYPB-207ENST00000506679 LRRC4CQ9HCJ2 640 aa4.7□□□□□ -1.66
GYPB-207ENST00000506679 ST14Q9Y5Y6 855 aa4.7□□□□□ -1.66
GYPB-207ENST00000506679 DNAJA1P31689 397 aaKnown RBP4.69□□□□□ -1.66
GYPB-207ENST00000506679 GBP1P32455 592 aa4.69□□□□□ -1.66
GYPB-207ENST00000506679 CLCN7P51798 805 aa4.69□□□□□ -1.66
GYPB-207ENST00000506679 ZYXQ15942 572 aaKnown RBP4.69□□□□□ -1.66
GYPB-207ENST00000506679 IFI16Q16666 785 aaKnown RBP4.69□□□□□ -1.66
GYPB-207ENST00000506679 FBXW10Q5XX13 1052 aa4.69□□□□□ -1.66
GYPB-207ENST00000506679 UNC5AQ6ZN44 842 aa4.69□□□□□ -1.66
GYPB-207ENST00000506679 NFXL1Q6ZNB6 911 aa4.69□□□□□ -1.66
GYPB-207ENST00000506679 MFSD4AQ8N468 514 aa4.69□□□□□ -1.66
GYPB-207ENST00000506679 CRBNQ96SW2 442 aa4.69□□□□□ -1.66
GYPB-207ENST00000506679 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.69□□□□□ -1.66
GYPB-207ENST00000506679 SNX11Q9Y5W9 270 aa4.69□□□□□ -1.66
GYPB-207ENST00000506679 A0A1W2PQH9 124 aa4.68□□□□□ -1.66
GYPB-207ENST00000506679 GNAT3A8MTJ3 354 aa4.68□□□□□ -1.66
GYPB-207ENST00000506679 SRFP11831 508 aa4.68□□□□□ -1.66
GYPB-207ENST00000506679 SSTR4P31391 388 aa4.68□□□□□ -1.66
GYPB-207ENST00000506679 TNK2Q07912 1038 aa4.68□□□□□ -1.66
GYPB-207ENST00000506679 NBPF12Q5TAG4 269 aaPredicted RBP4.68□□□□□ -1.66
GYPB-207ENST00000506679 TTC6Q86TZ1 520 aa4.68□□□□□ -1.66
GYPB-207ENST00000506679 PPFIBP1Q86W92 1011 aa4.68□□□□□ -1.66
GYPB-207ENST00000506679 DTWD2Q8NBA8 298 aa4.68□□□□□ -1.66
GYPB-207ENST00000506679 PIWIL2Q8TC59 973 aaKnown RBP4.68□□□□□ -1.66
GYPB-207ENST00000506679 SLC6A18Q96N87 628 aa4.68□□□□□ -1.66
GYPB-207ENST00000506679 ZNF408Q9H9D4 720 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms