RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ZMYM6O95789 1325 aa21.76■■□□□ 1.07
PDLIM7-216ENST00000506537 USP17L10C9JJH3 530 aa21.75■■□□□ 1.07
PDLIM7-216ENST00000506537 FGAP02671 866 aa21.75■■□□□ 1.07
PDLIM7-216ENST00000506537 CHMLP26374 656 aa21.75■■□□□ 1.07
PDLIM7-216ENST00000506537 TMEM179Q6ZVK1 233 aa21.75■■□□□ 1.07
PDLIM7-216ENST00000506537 CCDC17Q96LX7 622 aa21.75■■□□□ 1.07
PDLIM7-216ENST00000506537 ZFYVE28Q9HCC9 887 aa21.75■■□□□ 1.07
PDLIM7-216ENST00000506537 TACC3Q9Y6A5 838 aa21.75■■□□□ 1.07
PDLIM7-216ENST00000506537 PRDM1O75626 825 aa21.74■■□□□ 1.07
PDLIM7-216ENST00000506537 CYP2C8P10632 490 aa21.74■■□□□ 1.07
PDLIM7-216ENST00000506537 MFAP1P55081 439 aaKnown RBP21.74■■□□□ 1.07
PDLIM7-216ENST00000506537 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.74■■□□□ 1.07
PDLIM7-216ENST00000506537 EMILIN3Q9NT22 766 aa21.74■■□□□ 1.07
PDLIM7-216ENST00000506537 PPP4R2Q9NY27 417 aa21.74■■□□□ 1.07
PDLIM7-216ENST00000506537 SLC45A1Q9Y2W3 748 aa21.74■■□□□ 1.07
PDLIM7-216ENST00000506537 A0A1W2PRG0 241 aa21.73■■□□□ 1.07
PDLIM7-216ENST00000506537 TLR2O60603 784 aa21.73■■□□□ 1.07
PDLIM7-216ENST00000506537 CTDSPL2Q05D32 466 aa21.73■■□□□ 1.07
PDLIM7-216ENST00000506537 SIAH1Q8IUQ4 282 aa21.73■■□□□ 1.07
PDLIM7-216ENST00000506537 MKNK2Q9HBH9 465 aa21.73■■□□□ 1.07
PDLIM7-216ENST00000506537 ANAPC4Q9UJX5 808 aa21.73■■□□□ 1.07
PDLIM7-216ENST00000506537 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.73■■□□□ 1.07
PDLIM7-216ENST00000506537 LAMA4Q16363 1823 aa21.73■■□□□ 1.07
PDLIM7-216ENST00000506537 C19orf81C9J6K1 198 aa21.72■■□□□ 1.07
PDLIM7-216ENST00000506537 FKTNO75072 461 aa21.72■■□□□ 1.07
PDLIM7-216ENST00000506537 ZYXQ15942 572 aaKnown RBP21.72■■□□□ 1.07
PDLIM7-216ENST00000506537 PARK7Q99497 189 aaKnown RBP21.72■■□□□ 1.07
PDLIM7-216ENST00000506537 FEZ1Q99689 392 aa21.72■■□□□ 1.07
PDLIM7-216ENST00000506537 KIAA1683Q9H0B3 1180 aa21.72■■□□□ 1.07
PDLIM7-216ENST00000506537 INCENPQ9NQS7 918 aa21.72■■□□□ 1.07
PDLIM7-216ENST00000506537 RAD50Q92878 1312 aa21.72■■□□□ 1.07
PDLIM7-216ENST00000506537 CAP1Q01518 475 aa21.71■■□□□ 1.07
PDLIM7-216ENST00000506537 ICA1Q05084 483 aa21.71■■□□□ 1.07
PDLIM7-216ENST00000506537 BMP2KLQ5H9B9 411 aa21.71■■□□□ 1.07
PDLIM7-216ENST00000506537 USP17L2Q6R6M4 530 aa21.71■■□□□ 1.07
PDLIM7-216ENST00000506537 C12orf42Q96LP6 360 aa21.71■■□□□ 1.07
PDLIM7-216ENST00000506537 NBPF3Q9H094 633 aa21.71■■□□□ 1.07
PDLIM7-216ENST00000506537 TMOD4Q9NZQ9 345 aa21.71■■□□□ 1.07
PDLIM7-216ENST00000506537 ZSWIM8A7E2V4 1837 aa21.71■■□□□ 1.07
PDLIM7-216ENST00000506537 IGKV6D-41A0A0C4DH26 115 aa21.7■■□□□ 1.06
PDLIM7-216ENST00000506537 C17orf99Q6UX52 265 aa21.7■■□□□ 1.06
PDLIM7-216ENST00000506537 CPA4Q9UI42 421 aa21.7■■□□□ 1.06
PDLIM7-216ENST00000506537 SLC3A2P08195 630 aaKnown RBP21.69■■□□□ 1.06
PDLIM7-216ENST00000506537 HAND2P61296 217 aa21.69■■□□□ 1.06
PDLIM7-216ENST00000506537 PDE4BQ07343 736 aa21.69■■□□□ 1.06
PDLIM7-216ENST00000506537 KIAA1755Q5JYT7 1200 aa21.69■■□□□ 1.06
PDLIM7-216ENST00000506537 DSCC1Q9BVC3 393 aa21.69■■□□□ 1.06
PDLIM7-216ENST00000506537 ASCC2Q9H1I8 757 aaPredicted RBP21.69■■□□□ 1.06
PDLIM7-216ENST00000506537 ZNF287Q9HBT7 754 aa21.69■■□□□ 1.06
PDLIM7-216ENST00000506537 PLIN4Q96Q06 1357 aa21.69■■□□□ 1.06
PDLIM7-216ENST00000506537 SGSM2O43147 1006 aa21.68■■□□□ 1.06
PDLIM7-216ENST00000506537 FGRP09769 529 aa21.68■■□□□ 1.06
PDLIM7-216ENST00000506537 EEF2P13639 858 aaKnown RBP21.68■■□□□ 1.06
PDLIM7-216ENST00000506537 VCAM1P19320 739 aa21.68■■□□□ 1.06
PDLIM7-216ENST00000506537 USP14P54578 494 aa21.68■■□□□ 1.06
PDLIM7-216ENST00000506537 SP3Q02447 781 aa21.68■■□□□ 1.06
PDLIM7-216ENST00000506537 TBC1D10CQ8IV04 446 aa21.68■■□□□ 1.06
PDLIM7-216ENST00000506537 CD99L2Q8TCZ2 262 aa21.68■■□□□ 1.06
PDLIM7-216ENST00000506537 KANSL2Q9H9L4 492 aa21.68■■□□□ 1.06
PDLIM7-216ENST00000506537 HTTP42858 3142 aa21.68■■□□□ 1.06
PDLIM7-216ENST00000506537 BCRP11274 1271 aa21.67■■□□□ 1.06
PDLIM7-216ENST00000506537 HOXA7P31268 230 aaPredicted RBP21.67■■□□□ 1.06
PDLIM7-216ENST00000506537 FAM47AQ5JRC9 791 aa21.67■■□□□ 1.06
PDLIM7-216ENST00000506537 ZNF444Q8N0Y2 327 aaPredicted RBP21.67■■□□□ 1.06
PDLIM7-216ENST00000506537 RUFY2Q8WXA3 655 aa21.67■■□□□ 1.06
PDLIM7-216ENST00000506537 ARHGEF10LQ9HCE6 1279 aa21.67■■□□□ 1.06
PDLIM7-216ENST00000506537 PNMA3Q9UL41 463 aa21.67■■□□□ 1.06
PDLIM7-216ENST00000506537 TMX2Q9Y320 296 aa21.67■■□□□ 1.06
PDLIM7-216ENST00000506537 ORC4O43929 436 aa21.66■■□□□ 1.06
PDLIM7-216ENST00000506537 PABPC4Q13310 644 aaKnown RBP eCLIP21.66■■□□□ 1.06
PDLIM7-216ENST00000506537 CTU1Q7Z7A3 348 aaKnown RBP21.66■■□□□ 1.06
PDLIM7-216ENST00000506537 NKX2-3Q8TAU0 364 aa21.66■■□□□ 1.06
PDLIM7-216ENST00000506537 TFAP4Q01664 338 aa21.65■■□□□ 1.06
PDLIM7-216ENST00000506537 ATP2B2Q01814 1243 aa21.65■■□□□ 1.06
PDLIM7-216ENST00000506537 PTH1RQ03431 593 aa21.65■■□□□ 1.06
PDLIM7-216ENST00000506537 NEDD1Q8NHV4 660 aa21.65■■□□□ 1.06
PDLIM7-216ENST00000506537 SMCR8Q8TEV9 937 aaPredicted RBP21.65■■□□□ 1.06
PDLIM7-216ENST00000506537 CEP95Q96GE4 821 aa21.65■■□□□ 1.06
PDLIM7-216ENST00000506537 ERO1AQ96HE7 468 aa21.65■■□□□ 1.06
PDLIM7-216ENST00000506537 ARHGAP39Q9C0H5 1083 aa21.65■■□□□ 1.06
PDLIM7-216ENST00000506537 MYH4Q9Y623 1939 aa21.65■■□□□ 1.06
PDLIM7-216ENST00000506537 TSPY3P0CV98 308 aa21.64■■□□□ 1.05
PDLIM7-216ENST00000506537 TSPY8P0CW00 308 aa21.64■■□□□ 1.05
PDLIM7-216ENST00000506537 OSBPP22059 807 aa21.64■■□□□ 1.05
PDLIM7-216ENST00000506537 CTGFP29279 349 aa21.64■■□□□ 1.05
PDLIM7-216ENST00000506537 IRX3P78415 501 aaPredicted RBP21.64■■□□□ 1.05
PDLIM7-216ENST00000506537 STAG1Q8WVM7 1258 aa21.64■■□□□ 1.05
PDLIM7-216ENST00000506537 P2RX7Q99572 595 aaKnown RBP21.64■■□□□ 1.05
PDLIM7-216ENST00000506537 MCOLN1Q9GZU1 580 aa21.64■■□□□ 1.05
PDLIM7-216ENST00000506537 VCPKMTQ9H867 229 aa21.64■■□□□ 1.05
PDLIM7-216ENST00000506537 NYAP2Q9P242 653 aa21.64■■□□□ 1.05
PDLIM7-216ENST00000506537 NEDD4P46934 1319 aa21.63■■□□□ 1.05
PDLIM7-216ENST00000506537 LACTBP83111 547 aaPredicted RBP21.63■■□□□ 1.05
PDLIM7-216ENST00000506537 AKNAD1Q5T1N1 836 aa21.63■■□□□ 1.05
PDLIM7-216ENST00000506537 POTEEQ6S8J3 1075 aa21.63■■□□□ 1.05
PDLIM7-216ENST00000506537 SPICE1Q8N0Z3 855 aa21.63■■□□□ 1.05
PDLIM7-216ENST00000506537 RPAP3Q9H6T3 665 aaPredicted RBP21.63■■□□□ 1.05
PDLIM7-216ENST00000506537 SH2D4AQ9H788 454 aa21.63■■□□□ 1.05
PDLIM7-216ENST00000506537 MTMR4Q9NYA4 1195 aa21.63■■□□□ 1.05
PDLIM7-216ENST00000506537 RLFQ13129 1914 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms