RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 HSPD1P10809 573 aaKnown RBP7.06□□□□□ -1.28
SCLT1-207ENST00000506233 HCLS1P14317 486 aaPredicted RBP7.06□□□□□ -1.28
SCLT1-207ENST00000506233 FAM98CQ17RN3 349 aaKnown RBP7.06□□□□□ -1.28
SCLT1-207ENST00000506233 XAGE2Q96GT9 111 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 NOD1Q9Y239 953 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 BPTFQ12830 3046 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 CREB3O43889 395 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 ATP1A2P50993 1020 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 BLOC1S3Q6QNY0 202 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 CYLDQ9NQC7 956 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 C9orf78Q9NZ63 289 aaPredicted RBP7.06□□□□□ -1.28
SCLT1-207ENST00000506233 MTMR6Q9Y217 621 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 LAMA3Q16787 3333 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 FAM221BA6H8Z2 402 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 ITGA6P23229 1130 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 RNF187Q5TA31 235 aaPredicted RBP7.05□□□□□ -1.28
SCLT1-207ENST00000506233 FAM129BQ96TA1 746 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 CHMP5Q9NZZ3 219 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 SLC27A5Q9Y2P5 690 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 ZAP70P43403 619 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 PHKA1P46020 1223 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 EIF1AXP47813 144 aaKnown RBP7.05□□□□□ -1.28
SCLT1-207ENST00000506233 GNL2Q13823 731 aaKnown RBP7.05□□□□□ -1.28
SCLT1-207ENST00000506233 SLC35G1Q2M3R5 365 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 DDX46Q7L014 1031 aaKnown RBP7.05□□□□□ -1.28
SCLT1-207ENST00000506233 MB21D2Q8IYB1 491 aaPredicted RBP7.05□□□□□ -1.28
SCLT1-207ENST00000506233 RILPL2Q969X0 211 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 ZNF408Q9H9D4 720 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 PHIPQ8WWQ0 1821 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 CEP350Q5VT06 3117 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 SPATA31A6Q5VVP1 1343 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 STK10O94804 968 aaKnown RBP7.05□□□□□ -1.28
SCLT1-207ENST00000506233 GJA8P48165 433 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 ERFEQ4G0M1 354 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 DESI1Q6ICB0 168 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 TBC1D10CQ8IV04 446 aa7.05□□□□□ -1.28
SCLT1-207ENST00000506233 SRP68Q9UHB9 627 aaKnown RBP7.05□□□□□ -1.28
SCLT1-207ENST00000506233 PNMA6FA0A0J9YX94 578 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 RPS6KB1P23443 525 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 EVA1CP58658 441 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 MCCD1P59942 119 aaPredicted RBP7.04□□□□□ -1.28
SCLT1-207ENST00000506233 SCRN1Q12765 414 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 ADAM32Q8TC27 787 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 TCEANC2Q96MN5 208 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 BRINP2Q9C0B6 783 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 PDE8BO95263 885 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 RASGRF1Q13972 1273 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 SF3B3Q15393 1217 aaKnown RBP7.04□□□□□ -1.28
SCLT1-207ENST00000506233 CYB5R4Q7L1T6 521 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 TTC5Q8N0Z6 440 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 HMG20BQ9P0W2 317 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 DOLKQ9UPQ8 538 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 S100BP04271 92 aaPredicted RBP7.04□□□□□ -1.28
SCLT1-207ENST00000506233 NTRK3Q16288 839 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 CRY2Q49AN0 593 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 MEI1Q5TIA1 1274 aa7.04□□□□□ -1.28
SCLT1-207ENST00000506233 PRPF40BQ6NWY9 871 aaKnown RBP7.04□□□□□ -1.28
SCLT1-207ENST00000506233 RIOK1Q9BRS2 568 aaKnown RBP7.04□□□□□ -1.28
SCLT1-207ENST00000506233 EXOC5O00471 708 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 CFHP08603 1231 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 ASTLQ6HA08 431 aaPredicted RBP7.03□□□□□ -1.28
SCLT1-207ENST00000506233 TRIM50Q86XT4 487 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 NIF3L1Q9GZT8 377 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 RLFQ13129 1914 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 DDX58O95786 925 aaKnown RBP7.03□□□□□ -1.28
SCLT1-207ENST00000506233 PDGFRBP09619 1106 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 GPTP24298 496 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 ADD2P35612 726 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 IL15P40933 162 aaPredicted RBP7.03□□□□□ -1.28
SCLT1-207ENST00000506233 PLCB3Q01970 1234 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 PAK2Q13177 524 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 NPY5RQ15761 445 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 DDB1Q16531 1140 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 MAP7D1Q3KQU3 841 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 IER5LQ5T953 404 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 RC3H1Q5TC82 1133 aaKnown RBP7.03□□□□□ -1.28
SCLT1-207ENST00000506233 DZIP3Q86Y13 1208 aaKnown RBP7.03□□□□□ -1.28
SCLT1-207ENST00000506233 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.03□□□□□ -1.28
SCLT1-207ENST00000506233 CELF1Q92879 486 aaKnown RBP7.03□□□□□ -1.28
SCLT1-207ENST00000506233 PAG1Q9NWQ8 432 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 NDUFB5O43674 189 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 SYT1P21579 422 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 NEK4P51957 841 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 RHBDL3P58872 404 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 ZNF827Q17R98 1081 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 HSP90AB3PQ58FF7 597 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 NBPF11Q86T75 865 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 CRELD1Q96HD1 420 aa7.03□□□□□ -1.28
SCLT1-207ENST00000506233 ZMYM6O95789 1325 aa7.02□□□□□ -1.28
SCLT1-207ENST00000506233 ESPNB1AK53 854 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 EDIL3O43854 480 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 ERC1Q8IUD2 1116 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 SPC25Q9HBM1 224 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 IRS4O14654 1257 aaPredicted RBP7.02□□□□□ -1.29
SCLT1-207ENST00000506233 JAK2O60674 1132 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 DNAJC6O75061 913 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 DDR1Q08345 913 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 ENOX2Q16206 610 aaKnown RBP7.02□□□□□ -1.29
SCLT1-207ENST00000506233 SPTY2D1Q68D10 685 aaPredicted RBP7.02□□□□□ -1.29
SCLT1-207ENST00000506233 USP34Q70CQ2 3546 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms