RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 CPLX3Q8WVH0 158 aa8.69□□□□□ -1.02
PPARGC1A-204ENST00000506055 UBXN4Q92575 508 aa8.69□□□□□ -1.02
PPARGC1A-204ENST00000506055 SYMPKQ92797 1274 aaKnown RBP8.69□□□□□ -1.02
PPARGC1A-204ENST00000506055 PAGE5Q96GU1 130 aa8.69□□□□□ -1.02
PPARGC1A-204ENST00000506055 PHF20Q9BVI0 1012 aa8.69□□□□□ -1.02
PPARGC1A-204ENST00000506055 ANAPC4Q9UJX5 808 aa8.69□□□□□ -1.02
PPARGC1A-204ENST00000506055 CHD4Q14839 1912 aa8.69□□□□□ -1.02
PPARGC1A-204ENST00000506055 LRP5O75197 1615 aa8.69□□□□□ -1.02
PPARGC1A-204ENST00000506055 USP17L12C9JPN9 530 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 USP17L21D6R901 530 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 PRPF3O43395 683 aaKnown RBP8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 STX10O60499 249 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 COBLO75128 1261 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 GTF2E1P29083 439 aaPredicted RBP8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 RCAN1P53805 252 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 KCNQ4P56696 695 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 CTR9Q6PD62 1173 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 TRIML1Q8N9V2 468 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 DESI2Q9BSY9 194 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 ARAP2Q8WZ64 1704 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 DOCK2Q92608 1830 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 TEX33O43247 280 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 SLFN14P0C7P3 912 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 CD44P16070 742 aaKnown RBP8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 CASQ1P31415 396 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 FUT2Q10981 343 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 TROAPQ12815 778 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 NR1I3Q14994 352 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 PPP2R5BQ15173 497 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 FAM47AQ5JRC9 791 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 SMIM5Q71RC9 77 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 ZNF771Q7L3S4 317 aaPredicted RBP8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 SPATA20Q8TB22 786 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 ZNF384Q8TF68 577 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 CCDC34Q96HJ3 373 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 WDR24Q96S15 920 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 CARD6Q9BX69 1037 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 BRMS1Q9HCU9 246 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 AATFQ9NY61 560 aaKnown RBP eCLIP8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 PARP3Q9Y6F1 533 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 TIAM2Q8IVF5 1701 aa8.68□□□□□ -1.02
PPARGC1A-204ENST00000506055 ADRA2BP18089 450 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 ERCC5P28715 1186 aaPredicted RBP8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 PTGDRQ13258 359 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 MTF1Q14872 753 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 FCHSD1Q86WN1 690 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 CREBRFQ8IUR6 639 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 MARCH10Q8NA82 808 aaPredicted RBP8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 FAM84BQ96KN1 310 aaPredicted RBP8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 MINPP1Q9UNW1 487 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 ZNF652Q9Y2D9 606 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 ZNF804BA4D1E1 1349 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 KCNQ2O43526 872 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 COL4A1P02462 1669 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 H2AFXP16104 143 aaPredicted RBP8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 CLCN6P51797 869 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 UBE4AQ14139 1066 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 KARSQ15046 597 aaKnown RBP8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 EPC1Q9H2F5 836 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 ST7Q9NRC1 585 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 RBM28Q9NW13 759 aaKnown RBP8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 BSDC1Q9NW68 430 aaPredicted RBP8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 JAG2Q9Y219 1238 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 BCORQ6W2J9 1755 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 SYNRGQ9UMZ2 1314 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 A0A1B0GTH6 734 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 SOWAHDA6NJG2 315 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 AKR1B15C9JRZ8 316 aaPredicted RBP8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 VEGFAP15692 232 aaPredicted RBP8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 KLRK1P26718 216 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 MCM7P33993 719 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 MECOMQ03112 1051 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 RBL2Q08999 1139 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 TTC38Q5R3I4 469 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 SPATA1Q5VX52 437 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 PIK3AP1Q6ZUJ8 805 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 PPFIBP1Q86W92 1011 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 SRBD1Q8N5C6 995 aaKnown RBP8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 CELF1Q92879 486 aaKnown RBP8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 FERMT2Q96AC1 680 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 NOL10Q9BSC4 688 aaKnown RBP8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 BRIP1Q9BX63 1249 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 BLZF1Q9H2G9 400 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 LZTFL1Q9NQ48 299 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 TFCP2L1Q9NZI6 479 aa8.67□□□□□ -1.02
PPARGC1A-204ENST00000506055 COL1A1P02452 1464 aaPredicted RBP8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 CALM1P0DP23 149 aa8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 CALM2P0DP24 149 aa8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 CALM3P0DP25 149 aa8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 NLRP5P59047 1200 aa8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 DPYDQ12882 1025 aa8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 BMS1Q14692 1282 aaKnown RBP8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 IGSF22Q8N9C0 903 aa8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 CTCFLQ8NI51 663 aaPredicted RBP8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 SRRTQ9BXP5 876 aaKnown RBP8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 IRX2Q9BZI1 471 aaPredicted RBP8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 STRCQ7RTU9 1775 aa8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 ADAMTS3O15072 1205 aa8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 CUL4BQ13620 913 aa8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 NPY5RQ15761 445 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms