RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 DDX41Q9UJV9 622 aaKnown RBP6.17□□□□□ -1.42
LINC01088-202ENST00000505149 TPX2Q9ULW0 747 aaKnown RBP6.17□□□□□ -1.42
LINC01088-202ENST00000505149 CAPN6Q9Y6Q1 641 aa6.17□□□□□ -1.42
LINC01088-202ENST00000505149 UNCXA6NJT0 531 aa6.16□□□□□ -1.42
LINC01088-202ENST00000505149 MLECQ14165 292 aa6.16□□□□□ -1.42
LINC01088-202ENST00000505149 SPRED2Q7Z698 418 aa6.16□□□□□ -1.42
LINC01088-202ENST00000505149 THAP5Q7Z6K1 395 aa6.16□□□□□ -1.42
LINC01088-202ENST00000505149 ABI1Q8IZP0 508 aa6.16□□□□□ -1.42
LINC01088-202ENST00000505149 MFSD4AQ8N468 514 aa6.16□□□□□ -1.42
LINC01088-202ENST00000505149 EAF1Q96JC9 268 aaPredicted RBP6.16□□□□□ -1.42
LINC01088-202ENST00000505149 DPH2Q9BQC3 489 aaPredicted RBP6.16□□□□□ -1.42
LINC01088-202ENST00000505149 SPON2Q9BUD6 331 aa6.16□□□□□ -1.42
LINC01088-202ENST00000505149 BRMS1Q9HCU9 246 aa6.16□□□□□ -1.42
LINC01088-202ENST00000505149 GMIPQ9P107 970 aa6.16□□□□□ -1.42
LINC01088-202ENST00000505149 PITPNM2Q9BZ72 1349 aa6.16□□□□□ -1.42
LINC01088-202ENST00000505149 CNTNAP4Q9C0A0 1308 aa6.16□□□□□ -1.42
LINC01088-202ENST00000505149 MEIS3P2A8K0S8 358 aa6.15□□□□□ -1.42
LINC01088-202ENST00000505149 DNAJA2O60884 412 aa6.15□□□□□ -1.42
LINC01088-202ENST00000505149 FUT4P22083 530 aa6.15□□□□□ -1.42
LINC01088-202ENST00000505149 ZNF165P49910 485 aa6.15□□□□□ -1.42
LINC01088-202ENST00000505149 APOBRQ0VD83 1088 aa6.15□□□□□ -1.42
LINC01088-202ENST00000505149 AOC3Q16853 763 aa6.15□□□□□ -1.42
LINC01088-202ENST00000505149 CDCP2Q5VXM1 449 aa6.15□□□□□ -1.42
LINC01088-202ENST00000505149 CCDC74BQ96LY2 380 aa6.15□□□□□ -1.42
LINC01088-202ENST00000505149 SEMA3GQ9NS98 782 aa6.15□□□□□ -1.42
LINC01088-202ENST00000505149 UBP1Q9NZI7 540 aa6.15□□□□□ -1.42
LINC01088-202ENST00000505149 LMCD1Q9NZU5 365 aa6.15□□□□□ -1.42
LINC01088-202ENST00000505149 PCDHB14Q9Y5E9 798 aa6.15□□□□□ -1.42
LINC01088-202ENST00000505149 ST14Q9Y5Y6 855 aa6.15□□□□□ -1.42
LINC01088-202ENST00000505149 SLC22A31A6NKX4 558 aa6.14□□□□□ -1.43
LINC01088-202ENST00000505149 PRR33A8MZF0 331 aa6.14□□□□□ -1.43
LINC01088-202ENST00000505149 UPK3BL1B0FP48 263 aa6.14□□□□□ -1.43
LINC01088-202ENST00000505149 UPK3BL2E5RIL1 263 aa6.14□□□□□ -1.43
LINC01088-202ENST00000505149 TLR3O15455 904 aaKnown RBP6.14□□□□□ -1.43
LINC01088-202ENST00000505149 GRIN3BO60391 1043 aa6.14□□□□□ -1.43
LINC01088-202ENST00000505149 CD8BP10966 210 aa6.14□□□□□ -1.43
LINC01088-202ENST00000505149 ITIH2P19823 946 aa6.14□□□□□ -1.43
LINC01088-202ENST00000505149 IRAK1P51617 712 aa6.14□□□□□ -1.43
LINC01088-202ENST00000505149 RACK1P63244 317 aaKnown RBP6.14□□□□□ -1.43
LINC01088-202ENST00000505149 LRRFIP1Q32MZ4 808 aaKnown RBP6.14□□□□□ -1.43
LINC01088-202ENST00000505149 CDH24Q86UP0 819 aa6.14□□□□□ -1.43
LINC01088-202ENST00000505149 TP53INP2Q8IXH6 220 aa6.14□□□□□ -1.43
LINC01088-202ENST00000505149 RNF141Q8WVD5 230 aa6.14□□□□□ -1.43
LINC01088-202ENST00000505149 NKD1Q969G9 470 aa6.14□□□□□ -1.43
LINC01088-202ENST00000505149 SPATA32Q96LK8 384 aa6.14□□□□□ -1.43
LINC01088-202ENST00000505149 CHURC1-FNTBB4DL54 471 aa6.13□□□□□ -1.43
LINC01088-202ENST00000505149 RGS13O14921 159 aa6.13□□□□□ -1.43
LINC01088-202ENST00000505149 CCNFP41002 786 aa6.13□□□□□ -1.43
LINC01088-202ENST00000505149 BNIP3Q12983 259 aa6.13□□□□□ -1.43
LINC01088-202ENST00000505149 COL9A2Q14055 689 aaPredicted RBP6.13□□□□□ -1.43
LINC01088-202ENST00000505149 ZNF394Q53GI3 561 aa6.13□□□□□ -1.43
LINC01088-202ENST00000505149 ANGEL2Q5VTE6 544 aaKnown RBP6.13□□□□□ -1.43
LINC01088-202ENST00000505149 MCTP1Q6DN14 999 aa6.13□□□□□ -1.43
LINC01088-202ENST00000505149 ZNF654Q8IZM8 581 aa6.13□□□□□ -1.43
LINC01088-202ENST00000505149 XAGE3Q8WTP9 111 aa6.13□□□□□ -1.43
LINC01088-202ENST00000505149 VWCEQ96DN2 955 aa6.13□□□□□ -1.43
LINC01088-202ENST00000505149 ASPNQ9BXN1 380 aa6.13□□□□□ -1.43
LINC01088-202ENST00000505149 CNNM2Q9H8M5 875 aa6.13□□□□□ -1.43
LINC01088-202ENST00000505149 FAM155AB1AL88 458 aaPredicted RBP6.12□□□□□ -1.43
LINC01088-202ENST00000505149 SRFP11831 508 aa6.12□□□□□ -1.43
LINC01088-202ENST00000505149 IMPDH2P12268 514 aa6.12□□□□□ -1.43
LINC01088-202ENST00000505149 HDLBPQ00341 1268 aaKnown RBP6.12□□□□□ -1.43
LINC01088-202ENST00000505149 TNK2Q07912 1038 aa6.12□□□□□ -1.43
LINC01088-202ENST00000505149 SEZ6Q53EL9 994 aa6.12□□□□□ -1.43
LINC01088-202ENST00000505149 SLC23A3Q6PIS1 610 aa6.12□□□□□ -1.43
LINC01088-202ENST00000505149 ZNF574Q6ZN55 896 aaPredicted RBP6.12□□□□□ -1.43
LINC01088-202ENST00000505149 RASGRP4Q8TDF6 673 aa6.12□□□□□ -1.43
LINC01088-202ENST00000505149 Q96M66 194 aa6.12□□□□□ -1.43
LINC01088-202ENST00000505149 GPR62Q9BZJ7 368 aa6.12□□□□□ -1.43
LINC01088-202ENST00000505149 ZNRF3Q9ULT6 936 aa6.12□□□□□ -1.43
LINC01088-202ENST00000505149 TNFRSF10CO14798 259 aa6.11□□□□□ -1.43
LINC01088-202ENST00000505149 ITGB5P18084 799 aa6.11□□□□□ -1.43
LINC01088-202ENST00000505149 CLCQ05315 142 aa6.11□□□□□ -1.43
LINC01088-202ENST00000505149 RAD51AP2Q09MP3 1159 aa6.11□□□□□ -1.43
LINC01088-202ENST00000505149 INTS3Q68E01 1043 aaKnown RBP6.11□□□□□ -1.43
LINC01088-202ENST00000505149 TAB3Q8N5C8 712 aaPredicted RBP6.11□□□□□ -1.43
LINC01088-202ENST00000505149 RBBP8NLQ8NC74 664 aaPredicted RBP6.11□□□□□ -1.43
LINC01088-202ENST00000505149 TMEM40Q8WWA1 233 aa6.11□□□□□ -1.43
LINC01088-202ENST00000505149 HSPA12BQ96MM6 686 aa6.11□□□□□ -1.43
LINC01088-202ENST00000505149 KLHL3Q9UH77 587 aa6.11□□□□□ -1.43
LINC01088-202ENST00000505149 PCDHGB7Q9Y5F8 929 aa6.11□□□□□ -1.43
LINC01088-202ENST00000505149 GJA8P48165 433 aa6.1□□□□□ -1.43
LINC01088-202ENST00000505149 PLCL1Q15111 1095 aa6.1□□□□□ -1.43
LINC01088-202ENST00000505149 ZNF792Q3KQV3 632 aa6.1□□□□□ -1.43
LINC01088-202ENST00000505149 OVOS1Q6IE37 1185 aa6.1□□□□□ -1.43
LINC01088-202ENST00000505149 TMPRSS7Q7RTY8 843 aa6.1□□□□□ -1.43
LINC01088-202ENST00000505149 NT5DC4Q86YG4 428 aa6.1□□□□□ -1.43
LINC01088-202ENST00000505149 DTWD2Q8NBA8 298 aa6.1□□□□□ -1.43
LINC01088-202ENST00000505149 BAHD1Q8TBE0 780 aaPredicted RBP6.1□□□□□ -1.43
LINC01088-202ENST00000505149 ATG4CQ96DT6 458 aa6.1□□□□□ -1.43
LINC01088-202ENST00000505149 KREMEN1Q96MU8 473 aa6.1□□□□□ -1.43
LINC01088-202ENST00000505149 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.1□□□□□ -1.43
LINC01088-202ENST00000505149 KCNH3Q9ULD8 1083 aa6.1□□□□□ -1.43
LINC01088-202ENST00000505149 UBOX5O94941 541 aa6.09□□□□□ -1.43
LINC01088-202ENST00000505149 CBX7O95931 251 aa6.09□□□□□ -1.43
LINC01088-202ENST00000505149 NME1P15531 152 aaKnown RBP6.09□□□□□ -1.43
LINC01088-202ENST00000505149 JUNBP17275 347 aaPredicted RBP6.09□□□□□ -1.43
LINC01088-202ENST00000505149 GAB4Q2WGN9 574 aa6.09□□□□□ -1.43
LINC01088-202ENST00000505149 ARSHQ5FYA8 562 aa6.09□□□□□ -1.43
LINC01088-202ENST00000505149 GK5Q6ZS86 529 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms