RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 ZNF444Q8N0Y2 327 aaPredicted RBP24.62■■□□□ 1.53
DDR1-255ENST00000504927 PNMA3Q9UL41 463 aa24.62■■□□□ 1.53
DDR1-255ENST00000504927 PHIPQ8WWQ0 1821 aa24.62■■□□□ 1.53
DDR1-255ENST00000504927 FGAP02671 866 aa24.61■■□□□ 1.53
DDR1-255ENST00000504927 AKR1B1P15121 316 aa24.61■■□□□ 1.53
DDR1-255ENST00000504927 SP3Q02447 781 aa24.61■■□□□ 1.53
DDR1-255ENST00000504927 RUFY2Q8WXA3 655 aa24.61■■□□□ 1.53
DDR1-255ENST00000504927 KIAA1683Q9H0B3 1180 aa24.61■■□□□ 1.53
DDR1-255ENST00000504927 KANSL2Q9H9L4 492 aa24.61■■□□□ 1.53
DDR1-255ENST00000504927 ATAD5Q96QE3 1844 aa24.61■■□□□ 1.53
DDR1-255ENST00000504927 OSBPP22059 807 aa24.6■■□□□ 1.53
DDR1-255ENST00000504927 ERO1AQ96HE7 468 aa24.6■■□□□ 1.53
DDR1-255ENST00000504927 FEZ1Q99689 392 aa24.6■■□□□ 1.53
DDR1-255ENST00000504927 PPP4R2Q9NY27 417 aa24.6■■□□□ 1.53
DDR1-255ENST00000504927 ANAPC4Q9UJX5 808 aa24.6■■□□□ 1.53
DDR1-255ENST00000504927 ZMYM6O95789 1325 aa24.6■■□□□ 1.53
DDR1-255ENST00000504927 CAPN15O75808 1086 aa24.59■■□□□ 1.53
DDR1-255ENST00000504927 RASA1P20936 1047 aa24.59■■□□□ 1.53
DDR1-255ENST00000504927 HOXA7P31268 230 aaPredicted RBP24.59■■□□□ 1.53
DDR1-255ENST00000504927 ARHGEF6Q15052 776 aa24.59■■□□□ 1.53
DDR1-255ENST00000504927 TREML2Q5T2D2 321 aa24.59■■□□□ 1.53
DDR1-255ENST00000504927 C17orf99Q6UX52 265 aa24.59■■□□□ 1.53
DDR1-255ENST00000504927 C12orf42Q96LP6 360 aa24.59■■□□□ 1.53
DDR1-255ENST00000504927 EMILIN3Q9NT22 766 aa24.59■■□□□ 1.53
DDR1-255ENST00000504927 HTTP42858 3142 aa24.58■■□□□ 1.53
DDR1-255ENST00000504927 CYP2C8P10632 490 aa24.58■■□□□ 1.53
DDR1-255ENST00000504927 CHMLP26374 656 aa24.58■■□□□ 1.53
DDR1-255ENST00000504927 CTU1Q7Z7A3 348 aaKnown RBP24.58■■□□□ 1.53
DDR1-255ENST00000504927 STK11IPQ8N1F8 1099 aa24.58■■□□□ 1.53
DDR1-255ENST00000504927 ACER1Q8TDN7 264 aa24.58■■□□□ 1.53
DDR1-255ENST00000504927 MCOLN1Q9GZU1 580 aa24.58■■□□□ 1.53
DDR1-255ENST00000504927 SH2D4AQ9H788 454 aa24.58■■□□□ 1.53
DDR1-255ENST00000504927 ARHGEF10LQ9HCE6 1279 aa24.58■■□□□ 1.53
DDR1-255ENST00000504927 PTPRFP10586 1907 aa24.58■■□□□ 1.53
DDR1-255ENST00000504927 ICA1Q05084 483 aa24.57■■□□□ 1.52
DDR1-255ENST00000504927 DGKZQ13574 1117 aa24.57■■□□□ 1.52
DDR1-255ENST00000504927 PKN2Q16513 984 aaKnown RBP24.57■■□□□ 1.52
DDR1-255ENST00000504927 RAD50Q92878 1312 aa24.57■■□□□ 1.52
DDR1-255ENST00000504927 SMCR8Q8TEV9 937 aaPredicted RBP24.56■■□□□ 1.52
DDR1-255ENST00000504927 DSCC1Q9BVC3 393 aa24.56■■□□□ 1.52
DDR1-255ENST00000504927 KIF22Q14807 665 aa24.55■■□□□ 1.52
DDR1-255ENST00000504927 BMP2KLQ5H9B9 411 aa24.55■■□□□ 1.52
DDR1-255ENST00000504927 SIAH1Q8IUQ4 282 aa24.55■■□□□ 1.52
DDR1-255ENST00000504927 ABHD8Q96I13 439 aa24.55■■□□□ 1.52
DDR1-255ENST00000504927 CPA4Q9UI42 421 aa24.55■■□□□ 1.52
DDR1-255ENST00000504927 CTNNA3Q9UI47 895 aa24.55■■□□□ 1.52
DDR1-255ENST00000504927 TMX2Q9Y320 296 aa24.55■■□□□ 1.52
DDR1-255ENST00000504927 ADGRA2Q96PE1 1338 aa24.55■■□□□ 1.52
DDR1-255ENST00000504927 A0A1W2PRG0 241 aa24.54■■□□□ 1.52
DDR1-255ENST00000504927 PRDM1O75626 825 aa24.54■■□□□ 1.52
DDR1-255ENST00000504927 FGRP09769 529 aa24.54■■□□□ 1.52
DDR1-255ENST00000504927 PCP11498 1178 aaKnown RBP24.54■■□□□ 1.52
DDR1-255ENST00000504927 GCLCP48506 637 aaPredicted RBP24.54■■□□□ 1.52
DDR1-255ENST00000504927 IRX3P78415 501 aaPredicted RBP24.54■■□□□ 1.52
DDR1-255ENST00000504927 CTDSPL2Q05D32 466 aa24.54■■□□□ 1.52
DDR1-255ENST00000504927 ZYXQ15942 572 aaKnown RBP24.54■■□□□ 1.52
DDR1-255ENST00000504927 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.54■■□□□ 1.52
DDR1-255ENST00000504927 ASCC2Q9H1I8 757 aaPredicted RBP24.54■■□□□ 1.52
DDR1-255ENST00000504927 USP17L15C9J2P7 530 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 USP17L13C9JLJ4 530 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 USP17L11C9JVI0 530 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 USP17L18D6R9N7 530 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 USP17L22D6RA61 530 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 USP17L17D6RBQ6 530 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 USP17L19D6RCP7 530 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 USP17L20D6RJB6 530 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 TSPY3P0CV98 308 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 TSPY8P0CW00 308 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 BCRP11274 1271 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 EEF2P13639 858 aaKnown RBP24.53■■□□□ 1.52
DDR1-255ENST00000504927 CAP1Q01518 475 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 USP17L24Q0WX57 530 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 PPP4R3BQ5MIZ7 849 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 NEDD1Q8NHV4 660 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 LPAR1Q92633 364 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 NYAP2Q9P242 653 aa24.53■■□□□ 1.52
DDR1-255ENST00000504927 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.53■■□□□ 1.52
DDR1-255ENST00000504927 ZNF213O14771 459 aa24.52■■□□□ 1.52
DDR1-255ENST00000504927 ORC4O43929 436 aa24.52■■□□□ 1.52
DDR1-255ENST00000504927 TFAP4Q01664 338 aa24.52■■□□□ 1.52
DDR1-255ENST00000504927 CD99L2Q8TCZ2 262 aa24.52■■□□□ 1.52
DDR1-255ENST00000504927 IGKV6D-41A0A0C4DH26 115 aa24.51■■□□□ 1.51
DDR1-255ENST00000504927 GNRH1P01148 92 aa24.51■■□□□ 1.51
DDR1-255ENST00000504927 VCAM1P19320 739 aa24.51■■□□□ 1.51
DDR1-255ENST00000504927 LACTBP83111 547 aaPredicted RBP24.51■■□□□ 1.51
DDR1-255ENST00000504927 ATP2B2Q01814 1243 aa24.51■■□□□ 1.51
DDR1-255ENST00000504927 CATSPERGQ6ZRH7 1159 aa24.51■■□□□ 1.51
DDR1-255ENST00000504927 GTF3C2Q8WUA4 911 aaPredicted RBP24.51■■□□□ 1.51
DDR1-255ENST00000504927 P2RX7Q99572 595 aaKnown RBP24.51■■□□□ 1.51
DDR1-255ENST00000504927 RNF41Q9H4P4 317 aaPredicted RBP24.51■■□□□ 1.51
DDR1-255ENST00000504927 VCPKMTQ9H867 229 aa24.51■■□□□ 1.51
DDR1-255ENST00000504927 EFCC1Q9HA90 598 aa24.51■■□□□ 1.51
DDR1-255ENST00000504927 NT5C2P49902 561 aa24.5■■□□□ 1.51
DDR1-255ENST00000504927 MFSD6Q6ZSS7 791 aa24.5■■□□□ 1.51
DDR1-255ENST00000504927 MKL1Q969V6 931 aa24.5■■□□□ 1.51
DDR1-255ENST00000504927 GOPCQ9HD26 462 aa24.5■■□□□ 1.51
DDR1-255ENST00000504927 MTMR4Q9NYA4 1195 aa24.5■■□□□ 1.51
DDR1-255ENST00000504927 SYNPO2Q9UMS6 1093 aa24.5■■□□□ 1.51
DDR1-255ENST00000504927 LOC285556D6RIA3 1793 aa24.49■■□□□ 1.51
DDR1-255ENST00000504927 ZSWIM8A7E2V4 1837 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms