RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 USP17L10C9JJH3 530 aa13.18□□□□□ -0.3
VCAN-205ENST00000503923 RANBP6O60518 1105 aaKnown RBP13.18□□□□□ -0.3
VCAN-205ENST00000503923 REC8O95072 547 aa13.18□□□□□ -0.3
VCAN-205ENST00000503923 BACE1P56817 501 aa13.18□□□□□ -0.3
VCAN-205ENST00000503923 TFAP4Q01664 338 aa13.18□□□□□ -0.3
VCAN-205ENST00000503923 ICA1Q05084 483 aa13.18□□□□□ -0.3
VCAN-205ENST00000503923 RRP12Q5JTH9 1297 aaKnown RBP13.18□□□□□ -0.3
VCAN-205ENST00000503923 FASTKD5Q7L8L6 764 aaKnown RBP13.18□□□□□ -0.3
VCAN-205ENST00000503923 IFNL1Q8IU54 200 aa13.18□□□□□ -0.3
VCAN-205ENST00000503923 NEDD1Q8NHV4 660 aa13.18□□□□□ -0.3
VCAN-205ENST00000503923 BRI3BPQ8WY22 251 aa13.18□□□□□ -0.3
VCAN-205ENST00000503923 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.18□□□□□ -0.3
VCAN-205ENST00000503923 INCENPQ9NQS7 918 aa13.18□□□□□ -0.3
VCAN-205ENST00000503923 TACC3Q9Y6A5 838 aa13.18□□□□□ -0.3
VCAN-205ENST00000503923 ALDH1A1P00352 501 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 CYP21A2P08686 494 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 USP14P54578 494 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 MTMR2Q13614 643 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 SH3D19Q5HYK7 790 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 FAM47AQ5JRC9 791 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 PPP4R3BQ5MIZ7 849 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 PROCA1Q8NCQ7 364 aaPredicted RBP13.17□□□□□ -0.3
VCAN-205ENST00000503923 ESR2Q92731 530 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 FEZ1Q99689 392 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 PTPN18Q99952 460 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 KIAA1683Q9H0B3 1180 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 SH2D4AQ9H788 454 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 CNNM2Q9H8M5 875 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 ARHGEF10LQ9HCE6 1279 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 ZCCHC17Q9NP64 241 aaKnown RBP13.17□□□□□ -0.3
VCAN-205ENST00000503923 WBP1LQ9NX94 342 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 TMOD4Q9NZQ9 345 aa13.17□□□□□ -0.3
VCAN-205ENST00000503923 NEDD4P46934 1319 aa13.16□□□□□ -0.3
VCAN-205ENST00000503923 IGKV6D-41A0A0C4DH26 115 aa13.16□□□□□ -0.3
VCAN-205ENST00000503923 IGF2BP3O00425 579 aaKnown RBP eCLIP13.16□□□□□ -0.3
VCAN-205ENST00000503923 CA12O43570 354 aa13.16□□□□□ -0.3
VCAN-205ENST00000503923 HMGCS2P54868 508 aa13.16□□□□□ -0.3
VCAN-205ENST00000503923 MOGSQ13724 837 aa13.16□□□□□ -0.3
VCAN-205ENST00000503923 NECTIN1Q15223 517 aa13.16□□□□□ -0.3
VCAN-205ENST00000503923 RNF20Q5VTR2 975 aa13.16□□□□□ -0.3
VCAN-205ENST00000503923 USP17L2Q6R6M4 530 aa13.16□□□□□ -0.3
VCAN-205ENST00000503923 GADL1Q6ZQY3 521 aa13.16□□□□□ -0.3
VCAN-205ENST00000503923 ANKRD23Q86SG2 305 aa13.16□□□□□ -0.3
VCAN-205ENST00000503923 ACER1Q8TDN7 264 aa13.16□□□□□ -0.3
VCAN-205ENST00000503923 KRT23Q9C075 422 aa13.16□□□□□ -0.3
VCAN-205ENST00000503923 SAGE1Q9NXZ1 904 aa13.16□□□□□ -0.3
VCAN-205ENST00000503923 PCNTO95613 3336 aa13.16□□□□□ -0.3
VCAN-205ENST00000503923 LOC285556D6RIA3 1793 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 A0A1W2PRG0 241 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 BTBD19C9JJ37 291 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 EPB41L2O43491 1005 aaKnown RBP13.15□□□□□ -0.3
VCAN-205ENST00000503923 EIF5BO60841 1220 aaKnown RBP13.15□□□□□ -0.3
VCAN-205ENST00000503923 EEF2P13639 858 aaKnown RBP13.15□□□□□ -0.3
VCAN-205ENST00000503923 ATP2B2Q01814 1243 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 TRDNQ13061 729 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 CREB3L3Q68CJ9 461 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 CLEC10AQ8IUN9 316 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 SIAH1Q8IUQ4 282 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 FAM43AQ8N2R8 423 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 CEP95Q96GE4 821 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 TCP11L1Q9NUJ3 509 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 RNF186Q9NXI6 227 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 MTMR4Q9NYA4 1195 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 NYAP2Q9P242 653 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 AGTPBP1Q9UPW5 1226 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
VCAN-205ENST00000503923 B4E1Z4 1266 aa13.14□□□□□ -0.31
VCAN-205ENST00000503923 SLC27A2O14975 620 aa13.14□□□□□ -0.31
VCAN-205ENST00000503923 TRPA1O75762 1119 aa13.14□□□□□ -0.31
VCAN-205ENST00000503923 TTLL1O95922 423 aa13.14□□□□□ -0.31
VCAN-205ENST00000503923 HSPA1AP0DMV8 641 aaKnown RBP13.14□□□□□ -0.31
VCAN-205ENST00000503923 HSPA1BP0DMV9 641 aaKnown RBP13.14□□□□□ -0.31
VCAN-205ENST00000503923 PABPC4Q13310 644 aaKnown RBP eCLIP13.14□□□□□ -0.31
VCAN-205ENST00000503923 ZYXQ15942 572 aaKnown RBP13.14□□□□□ -0.31
VCAN-205ENST00000503923 GPAT2Q6NUI2 795 aa13.14□□□□□ -0.31
VCAN-205ENST00000503923 C12orf42Q96LP6 360 aa13.14□□□□□ -0.31
VCAN-205ENST00000503923 EMILIN3Q9NT22 766 aa13.14□□□□□ -0.31
VCAN-205ENST00000503923 CLIP2Q9UDT6 1046 aa13.14□□□□□ -0.31
VCAN-205ENST00000503923 SYNPO2Q9UMS6 1093 aa13.14□□□□□ -0.31
VCAN-205ENST00000503923 SLC45A1Q9Y2W3 748 aa13.14□□□□□ -0.31
VCAN-205ENST00000503923 E7EWF7 191 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 PDHXO00330 501 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 KDM4AO75164 1064 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 DGKZQ13574 1117 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 CCDC178Q5BJE1 867 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 TREML2Q5T2D2 321 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 RALYLQ86SE5 291 aaKnown RBP13.13□□□□□ -0.31
VCAN-205ENST00000503923 IQCA1Q86XH1 822 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 NCOA7Q8NI08 942 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 LPAR1Q92633 364 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 MKL1Q969V6 931 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 CFHR5Q9BXR6 569 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 VCPKMTQ9H867 229 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 GOPCQ9HD26 462 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 IL17RBQ9NRM6 502 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 PNMA3Q9UL41 463 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 STX8Q9UNK0 236 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 MYH4Q9Y623 1939 aa13.13□□□□□ -0.31
VCAN-205ENST00000503923 NMT2O60551 498 aa13.12□□□□□ -0.31
VCAN-205ENST00000503923 ZKSCAN1P17029 563 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms