RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 U2AF2P26368 475 aaKnown RBP eCLIP25.49■■□□□ 1.67
PTPN13-205ENST00000502971 KIF5BP33176 963 aa25.49■■□□□ 1.67
PTPN13-205ENST00000502971 CMTR1Q8N1G2 835 aaKnown RBP25.49■■□□□ 1.67
PTPN13-205ENST00000502971 CCDC82Q8N4S0 544 aa25.49■■□□□ 1.67
PTPN13-205ENST00000502971 NLGN2Q8NFZ4 835 aa25.49■■□□□ 1.67
PTPN13-205ENST00000502971 DDX4Q9NQI0 724 aaKnown RBP25.49■■□□□ 1.67
PTPN13-205ENST00000502971 SAFBQ15424 915 aaKnown RBP eCLIP25.48■■□□□ 1.67
PTPN13-205ENST00000502971 PGBD1Q96JS3 809 aa25.48■■□□□ 1.67
PTPN13-205ENST00000502971 OSBPL5Q9H0X9 879 aaPredicted RBP25.48■■□□□ 1.67
PTPN13-205ENST00000502971 POLR3EQ9NVU0 708 aa25.48■■□□□ 1.67
PTPN13-205ENST00000502971 XRCC6P12956 609 aaKnown RBP eCLIP25.47■■□□□ 1.67
PTPN13-205ENST00000502971 CEBPZQ03701 1054 aaKnown RBP25.47■■□□□ 1.67
PTPN13-205ENST00000502971 GABPAQ06546 454 aa25.47■■□□□ 1.67
PTPN13-205ENST00000502971 GNL2Q13823 731 aaKnown RBP25.47■■□□□ 1.67
PTPN13-205ENST00000502971 TPRNQ4KMQ1 711 aa25.47■■□□□ 1.67
PTPN13-205ENST00000502971 PNMA1Q8ND90 353 aa25.47■■□□□ 1.67
PTPN13-205ENST00000502971 SWAP70Q9UH65 585 aa25.47■■□□□ 1.67
PTPN13-205ENST00000502971 ADAMTSL1Q8N6G6 1762 aa25.46■■□□□ 1.67
PTPN13-205ENST00000502971 UBE2Q2LH0YL09 131 aa25.46■■□□□ 1.67
PTPN13-205ENST00000502971 PLEKHA8P1O95397 391 aa25.46■■□□□ 1.67
PTPN13-205ENST00000502971 YEATS4O95619 227 aa25.46■■□□□ 1.67
PTPN13-205ENST00000502971 MMP1P03956 469 aa25.46■■□□□ 1.67
PTPN13-205ENST00000502971 XBP1P17861 261 aa25.46■■□□□ 1.67
PTPN13-205ENST00000502971 YDJCA8MPS7 323 aa25.46■■□□□ 1.67
PTPN13-205ENST00000502971 NASPP49321 788 aaPredicted RBP25.46■■□□□ 1.67
PTPN13-205ENST00000502971 SYT17Q9BSW7 474 aa25.46■■□□□ 1.67
PTPN13-205ENST00000502971 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.46■■□□□ 1.67
PTPN13-205ENST00000502971 FTOQ9C0B1 505 aaKnown RBP eCLIP25.46■■□□□ 1.67
PTPN13-205ENST00000502971 BCS1LQ9Y276 419 aa25.46■■□□□ 1.67
PTPN13-205ENST00000502971 NPM3O75607 178 aaKnown RBP25.45■■□□□ 1.66
PTPN13-205ENST00000502971 MYO3BQ8WXR4 1341 aa25.45■■□□□ 1.66
PTPN13-205ENST00000502971 PLIN4Q96Q06 1357 aa25.44■■□□□ 1.66
PTPN13-205ENST00000502971 CNTNAP5Q8WYK1 1306 aa25.44■■□□□ 1.66
PTPN13-205ENST00000502971 HLA-DOAP06340 250 aa25.44■■□□□ 1.66
PTPN13-205ENST00000502971 GNAQP50148 359 aa25.44■■□□□ 1.66
PTPN13-205ENST00000502971 GRM4Q14833 912 aa25.44■■□□□ 1.66
PTPN13-205ENST00000502971 PKN1Q16512 942 aa25.44■■□□□ 1.66
PTPN13-205ENST00000502971 LINC00301Q8NCQ3 95 aa25.44■■□□□ 1.66
PTPN13-205ENST00000502971 BICD2Q8TD16 824 aa25.44■■□□□ 1.66
PTPN13-205ENST00000502971 KCNG4Q8TDN1 519 aa25.44■■□□□ 1.66
PTPN13-205ENST00000502971 IDI2Q9BXS1 227 aa25.44■■□□□ 1.66
PTPN13-205ENST00000502971 FOXP1Q9H334 677 aaPredicted RBP25.44■■□□□ 1.66
PTPN13-205ENST00000502971 V9GY48 417 aaPredicted RBP25.44■■□□□ 1.66
PTPN13-205ENST00000502971 NOVP48745 357 aa25.43■■□□□ 1.66
PTPN13-205ENST00000502971 RBM5P52756 815 aaKnown RBP eCLIP25.43■■□□□ 1.66
PTPN13-205ENST00000502971 LARGE2Q8N3Y3 721 aa25.43■■□□□ 1.66
PTPN13-205ENST00000502971 SRBD1Q8N5C6 995 aaKnown RBP25.43■■□□□ 1.66
PTPN13-205ENST00000502971 TMEM47Q9BQJ4 181 aa25.43■■□□□ 1.66
PTPN13-205ENST00000502971 SERPINB13Q9UIV8 391 aa25.43■■□□□ 1.66
PTPN13-205ENST00000502971 TAOK2Q9UL54 1235 aa25.43■■□□□ 1.66
PTPN13-205ENST00000502971 GOLGB1Q14789 3259 aaKnown RBP25.43■■□□□ 1.66
PTPN13-205ENST00000502971 LIG1P18858 919 aa25.43■■□□□ 1.66
PTPN13-205ENST00000502971 STK38Q15208 465 aa25.43■■□□□ 1.66
PTPN13-205ENST00000502971 ANO1Q5XXA6 986 aa25.43■■□□□ 1.66
PTPN13-205ENST00000502971 EHD4Q9H223 541 aa25.43■■□□□ 1.66
PTPN13-205ENST00000502971 STX8Q9UNK0 236 aa25.43■■□□□ 1.66
PTPN13-205ENST00000502971 DHX36Q9H2U1 1008 aaKnown RBP25.42■■□□□ 1.66
PTPN13-205ENST00000502971 DDX19AQ9NUU7 478 aaKnown RBP25.42■■□□□ 1.66
PTPN13-205ENST00000502971 CLIC4Q9Y696 253 aa25.42■■□□□ 1.66
PTPN13-205ENST00000502971 MYH6P13533 1939 aa25.42■■□□□ 1.66
PTPN13-205ENST00000502971 NFIAQ12857 509 aa25.41■■□□□ 1.66
PTPN13-205ENST00000502971 NOSTRINQ8IVI9 506 aa25.41■■□□□ 1.66
PTPN13-205ENST00000502971 DIS3L2Q8IYB7 885 aaKnown RBP25.41■■□□□ 1.66
PTPN13-205ENST00000502971 KCNJ14Q9UNX9 436 aa25.41■■□□□ 1.66
PTPN13-205ENST00000502971 ARFGEF1Q9Y6D6 1849 aa25.41■■□□□ 1.66
PTPN13-205ENST00000502971 LTBP3Q9NS15 1303 aa25.41■■□□□ 1.66
PTPN13-205ENST00000502971 TOP1P11387 765 aaKnown RBP25.4■■□□□ 1.66
PTPN13-205ENST00000502971 ME1P48163 572 aa25.4■■□□□ 1.66
PTPN13-205ENST00000502971 RSBN1LQ6PCB5 846 aaPredicted RBP25.4■■□□□ 1.66
PTPN13-205ENST00000502971 TAOK3Q9H2K8 898 aa25.4■■□□□ 1.66
PTPN13-205ENST00000502971 TSPY26PQ9H489 355 aa25.4■■□□□ 1.66
PTPN13-205ENST00000502971 ZNF277Q9NRM2 450 aaPredicted RBP25.4■■□□□ 1.66
PTPN13-205ENST00000502971 VIL1P09327 827 aaKnown RBP25.4■■□□□ 1.66
PTPN13-205ENST00000502971 SF3A1Q15459 793 aaKnown RBP25.4■■□□□ 1.66
PTPN13-205ENST00000502971 LZTS2Q9BRK4 669 aa25.4■■□□□ 1.66
PTPN13-205ENST00000502971 BTBD18B2RXH4 712 aa25.39■■□□□ 1.65
PTPN13-205ENST00000502971 SPTLC2O15270 562 aa25.39■■□□□ 1.65
PTPN13-205ENST00000502971 ADALQ6DHV7 355 aa25.39■■□□□ 1.65
PTPN13-205ENST00000502971 CEP95Q96GE4 821 aa25.39■■□□□ 1.65
PTPN13-205ENST00000502971 PHF20Q9BVI0 1012 aa25.39■■□□□ 1.65
PTPN13-205ENST00000502971 NUP62CLQ9H1M0 184 aa25.39■■□□□ 1.65
PTPN13-205ENST00000502971 DACT1Q9NYF0 836 aa25.39■■□□□ 1.65
PTPN13-205ENST00000502971 MAD2L2Q9UI95 211 aa25.39■■□□□ 1.65
PTPN13-205ENST00000502971 PCDHAC2Q9Y5I4 1007 aa25.39■■□□□ 1.65
PTPN13-205ENST00000502971 A0A1W2PQ27 194 aa25.38■■□□□ 1.65
PTPN13-205ENST00000502971 A0A1W2PQ64 194 aa25.38■■□□□ 1.65
PTPN13-205ENST00000502971 A0A1W2PQD8 194 aa25.38■■□□□ 1.65
PTPN13-205ENST00000502971 CFAP100Q494V2 611 aa25.38■■□□□ 1.65
PTPN13-205ENST00000502971 CCAR1Q8IX12 1150 aaKnown RBP25.38■■□□□ 1.65
PTPN13-205ENST00000502971 PCDHA7Q9UN72 937 aa25.38■■□□□ 1.65
PTPN13-205ENST00000502971 FER1L6Q2WGJ9 1857 aa25.38■■□□□ 1.65
PTPN13-205ENST00000502971 PALM3A6NDB9 673 aaPredicted RBP25.37■■□□□ 1.65
PTPN13-205ENST00000502971 SLC39A14Q15043 492 aa25.37■■□□□ 1.65
PTPN13-205ENST00000502971 PFKFB3Q16875 520 aaPredicted RBP25.37■■□□□ 1.65
PTPN13-205ENST00000502971 RBSNQ9H1K0 784 aa25.37■■□□□ 1.65
PTPN13-205ENST00000502971 VPS54Q9P1Q0 977 aa25.37■■□□□ 1.65
PTPN13-205ENST00000502971 FAM198AQ9UFP1 575 aa25.37■■□□□ 1.65
PTPN13-205ENST00000502971 IGKV6D-41A0A0C4DH26 115 aa25.37■■□□□ 1.65
PTPN13-205ENST00000502971 SCG2P13521 617 aa25.37■■□□□ 1.65
PTPN13-205ENST00000502971 NIM1KQ8IY84 436 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms