RNA–Protein interactions for RNA: ENST00000502865.5

SFXN1-204, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 641 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-204ENST00000502865 PLIN4Q96Q06 1357 aa11.41□□□□□ -0.58
SFXN1-204ENST00000502865 ZC3H4Q9UPT8 1303 aaKnown RBP11.41□□□□□ -0.58
SFXN1-204ENST00000502865 POTECB2RU33 542 aa11.41□□□□□ -0.58
SFXN1-204ENST00000502865 GJB2P29033 226 aa11.41□□□□□ -0.58
SFXN1-204ENST00000502865 LMOD1P29536 600 aaPredicted RBP11.41□□□□□ -0.58
SFXN1-204ENST00000502865 ADD1P35611 737 aaKnown RBP11.41□□□□□ -0.58
SFXN1-204ENST00000502865 METAP2P50579 478 aaKnown RBP eCLIP11.41□□□□□ -0.58
SFXN1-204ENST00000502865 MAP3K10Q02779 954 aa11.41□□□□□ -0.58
SFXN1-204ENST00000502865 PKP1Q13835 747 aa11.41□□□□□ -0.58
SFXN1-204ENST00000502865 CERKLQ49MI3 558 aaPredicted RBP11.41□□□□□ -0.58
SFXN1-204ENST00000502865 MICU3Q86XE3 530 aa11.41□□□□□ -0.58
SFXN1-204ENST00000502865 DGKHQ86XP1 1220 aa11.41□□□□□ -0.58
SFXN1-204ENST00000502865 SMARCC2Q8TAQ2 1214 aa11.41□□□□□ -0.58
SFXN1-204ENST00000502865 CEP95Q96GE4 821 aa11.41□□□□□ -0.58
SFXN1-204ENST00000502865 TMEM47Q9BQJ4 181 aa11.41□□□□□ -0.58
SFXN1-204ENST00000502865 DEFB129Q9H1M3 183 aa11.41□□□□□ -0.58
SFXN1-204ENST00000502865 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.41□□□□□ -0.58
SFXN1-204ENST00000502865 CHMP5Q9NZZ3 219 aa11.41□□□□□ -0.58
SFXN1-204ENST00000502865 SMC3Q9UQE7 1217 aa11.41□□□□□ -0.58
SFXN1-204ENST00000502865 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.41□□□□□ -0.58
SFXN1-204ENST00000502865 GOLGA8AA7E2F4 631 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 MPHOSPH10O00566 681 aaKnown RBP11.4□□□□□ -0.58
SFXN1-204ENST00000502865 TBC1D12O60347 775 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 GDF11O95390 407 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 GUCY1A2P33402 732 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 TROAPQ12815 778 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 TNFAIP1Q13829 316 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 NTRK3Q16288 839 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 CCDC178Q5BJE1 867 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 NBPF12Q5TAG4 269 aaPredicted RBP11.4□□□□□ -0.58
SFXN1-204ENST00000502865 PRAMEF18Q5VWM3 479 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 DLK2Q6UY11 383 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 NUP133Q8WUM0 1156 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 DDX11Q96FC9 970 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 CCDC17Q96LX7 622 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 LLPHQ9BRT6 129 aaKnown RBP11.4□□□□□ -0.58
SFXN1-204ENST00000502865 TRIM34Q9BYJ4 488 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 MTMR4Q9NYA4 1195 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 GGA3Q9NZ52 723 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 HERC5Q9UII4 1024 aaKnown RBP11.4□□□□□ -0.58
SFXN1-204ENST00000502865 ZDHHC9Q9Y397 364 aa11.4□□□□□ -0.58
SFXN1-204ENST00000502865 NID2Q14112 1375 aa11.4□□□□□ -0.59
SFXN1-204ENST00000502865 PTPDC1A2A3K4 754 aa11.39□□□□□ -0.59
SFXN1-204ENST00000502865 FDPSP14324 419 aaKnown RBP11.39□□□□□ -0.59
SFXN1-204ENST00000502865 EPHX2P34913 555 aa11.39□□□□□ -0.59
SFXN1-204ENST00000502865 SEPT2Q15019 361 aa11.39□□□□□ -0.59
SFXN1-204ENST00000502865 ABCB5Q2M3G0 1257 aa11.39□□□□□ -0.59
SFXN1-204ENST00000502865 SYNE3Q6ZMZ3 975 aa11.39□□□□□ -0.59
SFXN1-204ENST00000502865 CATIPQ7Z7H3 387 aa11.39□□□□□ -0.59
SFXN1-204ENST00000502865 SIAH1Q8IUQ4 282 aa11.39□□□□□ -0.59
SFXN1-204ENST00000502865 APOBEC3FQ8IUX4 373 aaKnown RBP11.39□□□□□ -0.59
SFXN1-204ENST00000502865 CMTR1Q8N1G2 835 aaKnown RBP11.39□□□□□ -0.59
SFXN1-204ENST00000502865 FANCBQ8NB91 859 aa11.39□□□□□ -0.59
SFXN1-204ENST00000502865 CHMP4CQ96CF2 233 aa11.39□□□□□ -0.59
SFXN1-204ENST00000502865 KAT14Q9H8E8 782 aa11.39□□□□□ -0.59
SFXN1-204ENST00000502865 TAOK2Q9UL54 1235 aa11.39□□□□□ -0.59
SFXN1-204ENST00000502865 CIZ1Q9ULV3 898 aaPredicted RBP11.39□□□□□ -0.59
SFXN1-204ENST00000502865 STX8Q9UNK0 236 aa11.39□□□□□ -0.59
SFXN1-204ENST00000502865 SCN4AP35499 1836 aa11.39□□□□□ -0.59
SFXN1-204ENST00000502865 MYH4Q9Y623 1939 aa11.39□□□□□ -0.59
SFXN1-204ENST00000502865 WDR90Q96KV7 1748 aa11.38□□□□□ -0.59
SFXN1-204ENST00000502865 PHF20L1A8MW92 1017 aa11.38□□□□□ -0.59
SFXN1-204ENST00000502865 DDAH1O94760 285 aa11.38□□□□□ -0.59
SFXN1-204ENST00000502865 GH2P01242 217 aa11.38□□□□□ -0.59
SFXN1-204ENST00000502865 TOP1P11387 765 aaKnown RBP11.38□□□□□ -0.59
SFXN1-204ENST00000502865 RTN1Q16799 776 aa11.38□□□□□ -0.59
SFXN1-204ENST00000502865 USP50Q70EL3 339 aaPredicted RBP11.38□□□□□ -0.59
SFXN1-204ENST00000502865 RASGRP2Q7LDG7 609 aa11.38□□□□□ -0.59
SFXN1-204ENST00000502865 PNMA1Q8ND90 353 aa11.38□□□□□ -0.59
SFXN1-204ENST00000502865 TAF1DQ9H5J8 278 aaPredicted RBP11.38□□□□□ -0.59
SFXN1-204ENST00000502865 CLIP2Q9UDT6 1046 aa11.38□□□□□ -0.59
SFXN1-204ENST00000502865 UBE2Q2LH0YL09 131 aa11.37□□□□□ -0.59
SFXN1-204ENST00000502865 PLEKHA8P1O95397 391 aa11.37□□□□□ -0.59
SFXN1-204ENST00000502865 CALM1P0DP23 149 aa11.37□□□□□ -0.59
SFXN1-204ENST00000502865 CALM2P0DP24 149 aa11.37□□□□□ -0.59
SFXN1-204ENST00000502865 CALM3P0DP25 149 aa11.37□□□□□ -0.59
SFXN1-204ENST00000502865 EEF2P13639 858 aaKnown RBP11.37□□□□□ -0.59
SFXN1-204ENST00000502865 SYT1P21579 422 aa11.37□□□□□ -0.59
SFXN1-204ENST00000502865 RCAN1P53805 252 aa11.37□□□□□ -0.59
SFXN1-204ENST00000502865 GRM4Q14833 912 aa11.37□□□□□ -0.59
SFXN1-204ENST00000502865 TMEM179Q6ZVK1 233 aa11.37□□□□□ -0.59
SFXN1-204ENST00000502865 NBPF11Q86T75 865 aa11.37□□□□□ -0.59
SFXN1-204ENST00000502865 LRRC47Q8N1G4 583 aaKnown RBP11.37□□□□□ -0.59
SFXN1-204ENST00000502865 PHKBQ93100 1093 aa11.37□□□□□ -0.59
SFXN1-204ENST00000502865 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.37□□□□□ -0.59
SFXN1-204ENST00000502865 FZD1Q9UP38 647 aa11.37□□□□□ -0.59
SFXN1-204ENST00000502865 MTMR7Q9Y216 660 aa11.37□□□□□ -0.59
SFXN1-204ENST00000502865 ATAD5Q96QE3 1844 aa11.37□□□□□ -0.59
SFXN1-204ENST00000502865 SSC5DA1L4H1 1573 aa11.37□□□□□ -0.59
SFXN1-204ENST00000502865 PITPNM2Q9BZ72 1349 aa11.36□□□□□ -0.59
SFXN1-204ENST00000502865 ADM5C9JUS6 153 aa11.36□□□□□ -0.59
SFXN1-204ENST00000502865 CPLX1O14810 134 aa11.36□□□□□ -0.59
SFXN1-204ENST00000502865 DHX16O60231 1041 aaKnown RBP11.36□□□□□ -0.59
SFXN1-204ENST00000502865 BRD1O95696 1058 aa11.36□□□□□ -0.59
SFXN1-204ENST00000502865 TTLL1O95922 423 aa11.36□□□□□ -0.59
SFXN1-204ENST00000502865 CAP2P40123 477 aa11.36□□□□□ -0.59
SFXN1-204ENST00000502865 FUT2Q10981 343 aa11.36□□□□□ -0.59
SFXN1-204ENST00000502865 RAB3GAP1Q15042 981 aa11.36□□□□□ -0.59
SFXN1-204ENST00000502865 FOXD4L5Q5VV16 416 aaPredicted RBP11.36□□□□□ -0.59
SFXN1-204ENST00000502865 LARP1BQ659C4 914 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms