RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 FAM95CA0A1B0GW59 222 aa9.53□□□□□ -0.88
NEDD4-203ENST00000502612 RGS13O14921 159 aa9.53□□□□□ -0.88
NEDD4-203ENST00000502612 SLITRK5O94991 958 aa9.53□□□□□ -0.88
NEDD4-203ENST00000502612 RASSF7Q02833 373 aa9.53□□□□□ -0.88
NEDD4-203ENST00000502612 INTS3Q68E01 1043 aaKnown RBP9.53□□□□□ -0.88
NEDD4-203ENST00000502612 GIMAP6Q6P9H5 292 aa9.53□□□□□ -0.88
NEDD4-203ENST00000502612 BEND4Q6ZU67 534 aa9.53□□□□□ -0.88
NEDD4-203ENST00000502612 PPFIBP1Q86W92 1011 aa9.53□□□□□ -0.88
NEDD4-203ENST00000502612 SLC6A18Q96N87 628 aa9.53□□□□□ -0.88
NEDD4-203ENST00000502612 SIRPGQ9P1W8 387 aa9.53□□□□□ -0.88
NEDD4-203ENST00000502612 CDK11AQ9UQ88 783 aaPredicted RBP9.53□□□□□ -0.88
NEDD4-203ENST00000502612 MAPK8IP1Q9UQF2 711 aa9.53□□□□□ -0.88
NEDD4-203ENST00000502612 FAM221BA6H8Z2 402 aa9.52□□□□□ -0.89
NEDD4-203ENST00000502612 U2SURPO15042 1029 aaKnown RBP9.52□□□□□ -0.89
NEDD4-203ENST00000502612 GJB6O95452 261 aa9.52□□□□□ -0.89
NEDD4-203ENST00000502612 RASA3Q14644 834 aa9.52□□□□□ -0.89
NEDD4-203ENST00000502612 TDRD10Q5VZ19 366 aaKnown RBP9.52□□□□□ -0.89
NEDD4-203ENST00000502612 MRM1Q6IN84 353 aaKnown RBP9.52□□□□□ -0.89
NEDD4-203ENST00000502612 SHISA5Q8N114 240 aa9.52□□□□□ -0.89
NEDD4-203ENST00000502612 TOP6BLQ8N6T0 577 aa9.52□□□□□ -0.89
NEDD4-203ENST00000502612 TP53INP1Q96A56 240 aa9.52□□□□□ -0.89
NEDD4-203ENST00000502612 ZNF512BQ96KM6 892 aaPredicted RBP9.52□□□□□ -0.89
NEDD4-203ENST00000502612 CCDC74BQ96LY2 380 aa9.52□□□□□ -0.89
NEDD4-203ENST00000502612 SNTG2Q9NY99 539 aa9.52□□□□□ -0.89
NEDD4-203ENST00000502612 DHX15O43143 795 aaKnown RBP9.51□□□□□ -0.89
NEDD4-203ENST00000502612 LEFTY1O75610 366 aa9.51□□□□□ -0.89
NEDD4-203ENST00000502612 GBP1P32455 592 aa9.51□□□□□ -0.89
NEDD4-203ENST00000502612 MAP7Q14244 749 aa9.51□□□□□ -0.89
NEDD4-203ENST00000502612 FXNQ16595 210 aa9.51□□□□□ -0.89
NEDD4-203ENST00000502612 CDH24Q86UP0 819 aa9.51□□□□□ -0.89
NEDD4-203ENST00000502612 DNAJB8Q8NHS0 232 aa9.51□□□□□ -0.89
NEDD4-203ENST00000502612 KLHL6Q8WZ60 621 aa9.51□□□□□ -0.89
NEDD4-203ENST00000502612 SRPK1Q96SB4 655 aaKnown RBP9.51□□□□□ -0.89
NEDD4-203ENST00000502612 HMX2A2RU54 273 aa9.5□□□□□ -0.89
NEDD4-203ENST00000502612 DDAH1O94760 285 aa9.5□□□□□ -0.89
NEDD4-203ENST00000502612 GATA4P43694 442 aa9.5□□□□□ -0.89
NEDD4-203ENST00000502612 KCNMA1Q12791 1236 aa9.5□□□□□ -0.89
NEDD4-203ENST00000502612 LETMD1Q6P1Q0 360 aa9.5□□□□□ -0.89
NEDD4-203ENST00000502612 FAM178BQ8IXR5 827 aa9.5□□□□□ -0.89
NEDD4-203ENST00000502612 MFSD2AQ8NA29 543 aa9.5□□□□□ -0.89
NEDD4-203ENST00000502612 DEPDC7Q96QD5 511 aa9.5□□□□□ -0.89
NEDD4-203ENST00000502612 PRDM10Q9NQV6 1147 aa9.5□□□□□ -0.89
NEDD4-203ENST00000502612 MSRB2Q9Y3D2 182 aa9.5□□□□□ -0.89
NEDD4-203ENST00000502612 CNTNAP4Q9C0A0 1308 aa9.5□□□□□ -0.89
NEDD4-203ENST00000502612 C9IYK1 514 aa9.49□□□□□ -0.89
NEDD4-203ENST00000502612 ADMP35318 185 aa9.49□□□□□ -0.89
NEDD4-203ENST00000502612 PLA2G4EQ3MJ16 856 aa9.49□□□□□ -0.89
NEDD4-203ENST00000502612 PAOXQ6QHF9 649 aa9.49□□□□□ -0.89
NEDD4-203ENST00000502612 VHLLQ6RSH7 139 aa9.49□□□□□ -0.89
NEDD4-203ENST00000502612 C7orf69Q9H7B7 122 aa9.49□□□□□ -0.89
NEDD4-203ENST00000502612 ZNF214Q9UL59 606 aaPredicted RBP9.49□□□□□ -0.89
NEDD4-203ENST00000502612 COL17A1Q9UMD9 1497 aaPredicted RBP9.48□□□□□ -0.89
NEDD4-203ENST00000502612 GATA6Q92908 595 aa9.48□□□□□ -0.89
NEDD4-203ENST00000502612 TPSG1Q9NRR2 321 aa9.48□□□□□ -0.89
NEDD4-203ENST00000502612 SLC12A7Q9Y666 1083 aa9.48□□□□□ -0.89
NEDD4-203ENST00000502612 EOMESO95936 686 aa9.47□□□□□ -0.89
NEDD4-203ENST00000502612 TP53P04637 393 aaPredicted RBP9.47□□□□□ -0.89
NEDD4-203ENST00000502612 FAM87AP0C7U9 286 aa9.47□□□□□ -0.89
NEDD4-203ENST00000502612 PMS1P54277 932 aaKnown RBP9.47□□□□□ -0.89
NEDD4-203ENST00000502612 GNPTABQ3T906 1256 aa9.47□□□□□ -0.89
NEDD4-203ENST00000502612 KIAA1211LQ6NV74 962 aa9.47□□□□□ -0.89
NEDD4-203ENST00000502612 CLEC10AQ8IUN9 316 aa9.47□□□□□ -0.89
NEDD4-203ENST00000502612 MKL1Q969V6 931 aa9.47□□□□□ -0.89
NEDD4-203ENST00000502612 FAM83CQ9BQN1 747 aa9.47□□□□□ -0.89
NEDD4-203ENST00000502612 DUSP23Q9BVJ7 150 aa9.47□□□□□ -0.89
NEDD4-203ENST00000502612 PHAXQ9H814 394 aaKnown RBP9.47□□□□□ -0.89
NEDD4-203ENST00000502612 SUCOQ9UBS9 1254 aaKnown RBP9.47□□□□□ -0.89
NEDD4-203ENST00000502612 CEP131Q9UPN4 1083 aa9.47□□□□□ -0.89
NEDD4-203ENST00000502612 RAXQ9Y2V3 346 aa9.47□□□□□ -0.89
NEDD4-203ENST00000502612 SMARCA5O60264 1052 aaPredicted RBP9.46□□□□□ -0.9
NEDD4-203ENST00000502612 CLEC3AO75596 197 aa9.46□□□□□ -0.9
NEDD4-203ENST00000502612 CCNFP41002 786 aa9.46□□□□□ -0.9
NEDD4-203ENST00000502612 SLC7A5Q01650 507 aa9.46□□□□□ -0.9
NEDD4-203ENST00000502612 MRFAP1L1Q96HT8 127 aa9.46□□□□□ -0.9
NEDD4-203ENST00000502612 KREMEN1Q96MU8 473 aa9.46□□□□□ -0.9
NEDD4-203ENST00000502612 GDF11O95390 407 aa9.45□□□□□ -0.9
NEDD4-203ENST00000502612 NFE2L2Q16236 605 aa9.45□□□□□ -0.9
NEDD4-203ENST00000502612 AXDND1Q5T1B0 1012 aaPredicted RBP9.45□□□□□ -0.9
NEDD4-203ENST00000502612 JAZF1Q86VZ6 243 aa9.45□□□□□ -0.9
NEDD4-203ENST00000502612 TBC1D32Q96NH3 1257 aa9.45□□□□□ -0.9
NEDD4-203ENST00000502612 STOML1Q9UBI4 398 aa9.45□□□□□ -0.9
NEDD4-203ENST00000502612 PDPK1O15530 556 aa9.44□□□□□ -0.9
NEDD4-203ENST00000502612 DCAF15Q66K64 600 aa9.44□□□□□ -0.9
NEDD4-203ENST00000502612 ZNF746Q6NUN9 644 aaPredicted RBP9.44□□□□□ -0.9
NEDD4-203ENST00000502612 PRR23CQ6ZRP0 262 aa9.44□□□□□ -0.9
NEDD4-203ENST00000502612 NOP9Q86U38 636 aaKnown RBP9.44□□□□□ -0.9
NEDD4-203ENST00000502612 VWCEQ96DN2 955 aa9.44□□□□□ -0.9
NEDD4-203ENST00000502612 MFSD14AQ96MC6 490 aa9.44□□□□□ -0.9
NEDD4-203ENST00000502612 CCDC113Q9H0I3 377 aa9.44□□□□□ -0.9
NEDD4-203ENST00000502612 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.44□□□□□ -0.9
NEDD4-203ENST00000502612 SHROOM4Q9ULL8 1493 aa9.43□□□□□ -0.9
NEDD4-203ENST00000502612 FAM170BA6NMN3 283 aa9.43□□□□□ -0.9
NEDD4-203ENST00000502612 LRRN2O75325 713 aa9.43□□□□□ -0.9
NEDD4-203ENST00000502612 DOC2BQ14184 412 aa9.43□□□□□ -0.9
NEDD4-203ENST00000502612 NBPF12Q5TAG4 269 aaPredicted RBP9.43□□□□□ -0.9
NEDD4-203ENST00000502612 ZAR1Q86SH2 424 aa9.43□□□□□ -0.9
NEDD4-203ENST00000502612 FBXL6Q8N531 539 aa9.43□□□□□ -0.9
NEDD4-203ENST00000502612 MKRN2Q9H000 416 aaKnown RBP9.43□□□□□ -0.9
NEDD4-203ENST00000502612 TPX2Q9ULW0 747 aaKnown RBP9.43□□□□□ -0.9
NEDD4-203ENST00000502612 RASGRF1Q13972 1273 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms