RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 LAMB2P55268 1798 aa26.31■■□□□ 1.8
SNF8-202ENST00000502492 USP49Q70CQ1 688 aa26.31■■□□□ 1.8
SNF8-202ENST00000502492 GRAMD1CQ8IYS0 662 aa26.31■■□□□ 1.8
SNF8-202ENST00000502492 SDR42E1Q8WUS8 393 aa26.31■■□□□ 1.8
SNF8-202ENST00000502492 MAGEB6P1A0A0J9YX57 407 aa26.3■■□□□ 1.8
SNF8-202ENST00000502492 FUT2Q10981 343 aa26.3■■□□□ 1.8
SNF8-202ENST00000502492 PKN1Q16512 942 aa26.3■■□□□ 1.8
SNF8-202ENST00000502492 SPECC1LQ69YQ0 1117 aa26.3■■□□□ 1.8
SNF8-202ENST00000502492 AATFQ9NY61 560 aaKnown RBP eCLIP26.3■■□□□ 1.88e-6■■■■□ 21.3
SNF8-202ENST00000502492 MINDY4BA8MYZ0 360 aa26.3■■□□□ 1.8
SNF8-202ENST00000502492 FANCGO15287 622 aa26.3■■□□□ 1.8
SNF8-202ENST00000502492 ERCC5P28715 1186 aaPredicted RBP26.3■■□□□ 1.8
SNF8-202ENST00000502492 ZNF827Q17R98 1081 aa26.3■■□□□ 1.8
SNF8-202ENST00000502492 PPP2R2CQ9Y2T4 447 aa26.3■■□□□ 1.8
SNF8-202ENST00000502492 COL5A3P25940 1745 aaPredicted RBP26.29■■□□□ 1.8
SNF8-202ENST00000502492 MYH6P13533 1939 aa26.29■■□□□ 1.8
SNF8-202ENST00000502492 STX10O60499 249 aa26.29■■□□□ 1.8
SNF8-202ENST00000502492 GABPB1Q06547 395 aaPredicted RBP26.29■■□□□ 1.8
SNF8-202ENST00000502492 HSP90AA4PQ58FG1 418 aa26.29■■□□□ 1.8
SNF8-202ENST00000502492 KRT222Q8N1A0 295 aa26.29■■□□□ 1.8
SNF8-202ENST00000502492 PDILTQ8N807 584 aa26.29■■□□□ 1.8
SNF8-202ENST00000502492 TC2NQ8N9U0 490 aa26.29■■□□□ 1.8
SNF8-202ENST00000502492 RREB1Q92766 1687 aa26.29■■□□□ 1.8
SNF8-202ENST00000502492 BAG1Q99933 345 aaPredicted RBP26.29■■□□□ 1.8
SNF8-202ENST00000502492 RIOK1Q9BRS2 568 aaKnown RBP26.29■■□□□ 1.8
SNF8-202ENST00000502492 PHF20Q9BVI0 1012 aa26.29■■□□□ 1.8
SNF8-202ENST00000502492 XBP1P17861 261 aa26.28■■□□□ 1.8
SNF8-202ENST00000502492 ATP2B1P20020 1258 aa26.28■■□□□ 1.8
SNF8-202ENST00000502492 CDK11BP21127 795 aaKnown RBP26.28■■□□□ 1.8
SNF8-202ENST00000502492 PLCD1P51178 756 aa26.28■■□□□ 1.8
SNF8-202ENST00000502492 ENAHQ8N8S7 591 aaPredicted RBP26.28■■□□□ 1.8
SNF8-202ENST00000502492 SRRTQ9BXP5 876 aaKnown RBP26.28■■□□□ 1.8
SNF8-202ENST00000502492 NIP7Q9Y221 180 aaKnown RBP eCLIP26.28■■□□□ 1.8
SNF8-202ENST00000502492 VWA3AA6NCI4 1184 aa26.28■■□□□ 1.8
SNF8-202ENST00000502492 TRIM75PA6NK02 468 aa26.28■■□□□ 1.8
SNF8-202ENST00000502492 CT47A1Q5JQC4 288 aaPredicted RBP26.28■■□□□ 1.8
SNF8-202ENST00000502492 ZSCAN10Q96SZ4 725 aaPredicted RBP26.28■■□□□ 1.8
SNF8-202ENST00000502492 ZNF446Q9NWS9 450 aa26.28■■□□□ 1.8
SNF8-202ENST00000502492 PRPF3O43395 683 aaKnown RBP26.27■■□□□ 1.8
SNF8-202ENST00000502492 APBA3O96018 575 aa26.27■■□□□ 1.8
SNF8-202ENST00000502492 AKAP17AQ02040 695 aaKnown RBP26.27■■□□□ 1.8
SNF8-202ENST00000502492 TRMT44Q8IYL2 757 aaKnown RBP26.27■■□□□ 1.8
SNF8-202ENST00000502492 CDC5LQ99459 802 aaKnown RBP26.27■■□□□ 1.8
SNF8-202ENST00000502492 IQSEC3Q9UPP2 1182 aaPredicted RBP26.27■■□□□ 1.8
SNF8-202ENST00000502492 CNTNAP4Q9C0A0 1308 aa26.27■■□□□ 1.8
SNF8-202ENST00000502492 LRRC4BQ9NT99 713 aa26.27■■□□□ 1.8
SNF8-202ENST00000502492 RAI14Q9P0K7 980 aa26.27■■□□□ 1.8
SNF8-202ENST00000502492 ABCF2Q9UG63 623 aa26.27■■□□□ 1.8
SNF8-202ENST00000502492 COL4A1P02462 1669 aa26.26■■□□□ 1.8
SNF8-202ENST00000502492 FAM205CA6NFA0 338 aa26.26■■□□□ 1.79
SNF8-202ENST00000502492 SMIM22K7EJ46 135 aa26.26■■□□□ 1.79
SNF8-202ENST00000502492 NPHP1O15259 732 aa26.26■■□□□ 1.79
SNF8-202ENST00000502492 NR1I3Q14994 352 aa26.26■■□□□ 1.79
SNF8-202ENST00000502492 SAMSN1Q9NSI8 373 aaKnown RBP26.26■■□□□ 1.79
SNF8-202ENST00000502492 VPS54Q9P1Q0 977 aa26.26■■□□□ 1.79
SNF8-202ENST00000502492 DUOX1Q9NRD9 1551 aa26.26■■□□□ 1.79
SNF8-202ENST00000502492 GOLGA6L9A6NEM1 432 aa26.26■■□□□ 1.79
SNF8-202ENST00000502492 PLSCR1O15162 318 aa26.26■■□□□ 1.79
SNF8-202ENST00000502492 KRT2P35908 639 aa26.26■■□□□ 1.79
SNF8-202ENST00000502492 SLC27A3Q5K4L6 730 aa26.26■■□□□ 1.79
SNF8-202ENST00000502492 SH3RF1Q7Z6J0 888 aa26.26■■□□□ 1.79
SNF8-202ENST00000502492 GNL3LQ9NVN8 582 aaKnown RBP26.26■■□□□ 1.79
SNF8-202ENST00000502492 PARP3Q9Y6F1 533 aa26.26■■□□□ 1.79
SNF8-202ENST00000502492 CACNA1SQ13698 1873 aa26.25■■□□□ 1.79
SNF8-202ENST00000502492 KIF20AO95235 890 aa26.25■■□□□ 1.79
SNF8-202ENST00000502492 FGRP09769 529 aa26.25■■□□□ 1.79
SNF8-202ENST00000502492 EARS2Q5JPH6 523 aaKnown RBP26.25■■□□□ 1.79
SNF8-202ENST00000502492 BRIP1Q9BX63 1249 aa26.25■■□□□ 1.79
SNF8-202ENST00000502492 COL1A1P02452 1464 aaPredicted RBP26.25■■□□□ 1.79
SNF8-202ENST00000502492 A0A087X0B3 334 aa26.25■■□□□ 1.79
SNF8-202ENST00000502492 SLFN14P0C7P3 912 aa26.25■■□□□ 1.79
SNF8-202ENST00000502492 RC3H1Q5TC82 1133 aaKnown RBP26.25■■□□□ 1.79
SNF8-202ENST00000502492 CCDC34Q96HJ3 373 aa26.25■■□□□ 1.79
SNF8-202ENST00000502492 MYH14Q7Z406 1995 aaKnown RBP26.24■■□□□ 1.79
SNF8-202ENST00000502492 A0A1B0GTH6 734 aa26.24■■□□□ 1.79
SNF8-202ENST00000502492 GYG1P46976 350 aa26.24■■□□□ 1.79
SNF8-202ENST00000502492 CATIPQ7Z7H3 387 aa26.24■■□□□ 1.79
SNF8-202ENST00000502492 RBM28Q9NW13 759 aaKnown RBP26.24■■□□□ 1.79
SNF8-202ENST00000502492 BMP15O95972 392 aa26.23■■□□□ 1.79
SNF8-202ENST00000502492 ADKP55263 362 aaKnown RBP26.23■■□□□ 1.79
SNF8-202ENST00000502492 FERMT2Q96AC1 680 aa26.23■■□□□ 1.79
SNF8-202ENST00000502492 DHX58Q96C10 678 aa26.23■■□□□ 1.79
SNF8-202ENST00000502492 EPSTI1Q96J88 318 aa26.23■■□□□ 1.79
SNF8-202ENST00000502492 ZHX1Q9UKY1 873 aaPredicted RBP26.23■■□□□ 1.79
SNF8-202ENST00000502492 MYH2Q9UKX2 1941 aa26.23■■□□□ 1.79
SNF8-202ENST00000502492 PCP11498 1178 aaKnown RBP26.23■■□□□ 1.79
SNF8-202ENST00000502492 TROAPQ12815 778 aa26.23■■□□□ 1.79
SNF8-202ENST00000502492 UBE4AQ14139 1066 aa26.23■■□□□ 1.79
SNF8-202ENST00000502492 ARHGAP29Q52LW3 1261 aa26.23■■□□□ 1.79
SNF8-202ENST00000502492 IFIT1BQ5T764 474 aaKnown RBP26.23■■□□□ 1.79
SNF8-202ENST00000502492 V9GY48 417 aaPredicted RBP26.23■■□□□ 1.79
SNF8-202ENST00000502492 URI1O94763 535 aaPredicted RBP26.22■■□□□ 1.79
SNF8-202ENST00000502492 TXNRD1Q16881 649 aa26.22■■□□□ 1.79
SNF8-202ENST00000502492 APTXQ7Z2E3 356 aaKnown RBP26.22■■□□□ 1.79
SNF8-202ENST00000502492 PROM2Q8N271 834 aa26.22■■□□□ 1.79
SNF8-202ENST00000502492 TNFRSF25Q93038 417 aa26.22■■□□□ 1.79
SNF8-202ENST00000502492 PLEKHA8P1O95397 391 aa26.22■■□□□ 1.79
SNF8-202ENST00000502492 CALM1P0DP23 149 aa26.22■■□□□ 1.79
SNF8-202ENST00000502492 CALM2P0DP24 149 aa26.22■■□□□ 1.79
SNF8-202ENST00000502492 CALM3P0DP25 149 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms