RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 IGBP1P78318 339 aa5.28□□□□□ -1.56
NEAT1-202ENST00000501122 KLHL33A6NCF5 533 aa5.28□□□□□ -1.56
NEAT1-202ENST00000501122 TLK1Q9UKI8 766 aa5.28□□□□□ -1.56
NEAT1-202ENST00000501122 ESCO1Q5FWF5 840 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 FERMT3Q86UX7 667 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 CRNKL1Q9BZJ0 848 aaKnown RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 E7ENQ6 273 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 AXIN1O15169 862 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 AKR1B10O60218 316 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 MTMR3Q13615 1198 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 CWF19L2Q2TBE0 894 aaKnown RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 LONP2Q86WA8 852 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 NDUFA13Q9P0J0 144 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 ATP6V1HQ9UI12 483 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 TMEM191CA6NGB0 347 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 TMEM191BP0C7N4 346 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 CCND1P24385 295 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 ROR2Q01974 943 aaKnown RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 DSTYKQ6XUX3 929 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 LRRC8AQ8IWT6 810 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 KLHL25Q9H0H3 589 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 CAPN11Q9UMQ6 739 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 PABPN1LA6NDY0 278 aaKnown RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 KIF22Q14807 665 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 PDP2Q9P2J9 529 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 POLKQ9UBT6 870 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 ZBTB21Q9ULJ3 1066 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 UTP11Q9Y3A2 253 aaKnown RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 RAPGEF3O95398 923 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 G3BP1Q13283 466 aaKnown RBP eCLIP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 THOC7Q6I9Y2 204 aaKnown RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 SKA1Q96BD8 255 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 CD248Q9HCU0 757 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 SPEF1Q9Y4P9 236 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 GOLGA8JA6NMD2 632 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 GOLGA8TH3BQL2 631 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 GOLGA8HP0CJ92 632 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 OTUD6AQ7L8S5 288 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 ATP6V0A4Q9HBG4 840 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 THRAP3Q9Y2W1 955 aaKnown RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 SH3GLB1Q9Y371 365 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 ARHGAP6O43182 974 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 SDE2Q6IQ49 451 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 HDGFL2Q7Z4V5 671 aaPredicted RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 RAPGEF4Q8WZA2 1011 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 ZSCAN22P10073 491 aaPredicted RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 KRT2P35908 639 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 CCDC42Q96M95 316 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 STMN3Q9NZ72 180 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 KANK3Q6NY19 840 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 CDH24Q86UP0 819 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 LTV1Q96GA3 475 aaPredicted RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 KAZNQ674X7 775 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 MCF2L2Q86YR7 1114 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 OLFML3Q9NRN5 406 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 TTF2Q9UNY4 1162 aaKnown RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 ST20-MTHFSA0A0A6YYL1 179 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 DENND2CQ68D51 928 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 ZNF692Q9BU19 519 aaPredicted RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 MRPL40Q9NQ50 206 aaKnown RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 ADARP55265 1226 aaKnown RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 MRPS25P82663 173 aaKnown RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 ANGPT1Q15389 498 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 CAPN12Q6ZSI9 719 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 ANKRD7Q92527 254 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 PHACTR1Q9C0D0 580 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 SFI1A8K8P3 1242 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 TUFMP49411 452 aaKnown RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 MTTPP55157 894 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 CROCCP3Q8IVE0 287 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 THAP11Q96EK4 314 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 SLC52A1Q9NWF4 448 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 DLGAP2Q9P1A6 1054 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 GMNCA6NCL1 334 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 TRIM27P14373 513 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 RAD23BP54727 409 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 FSCBQ5H9T9 825 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 LMBRD1Q9NUN5 540 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 SERPINB3P29508 390 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 SERPINB1P30740 379 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 CCDC25Q86WR0 208 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 CCDC28BQ9BUN5 200 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 POLR2EP19388 210 aaKnown RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 NONOQ15233 471 aaKnown RBP eCLIP5.27□□□□□ -1.573e-16■■■□□ 14.9
NEAT1-202ENST00000501122 C15orf59Q2T9L4 293 aaPredicted RBP5.27□□□□□ -1.57
NEAT1-202ENST00000501122 SPATA7Q9P0W8 599 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 BTBD7Q9P203 1132 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 TRPC1P48995 793 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 PYCARDQ9ULZ3 195 aa5.27□□□□□ -1.57
NEAT1-202ENST00000501122 ARHGAP44Q17R89 818 aa5.26□□□□□ -1.57
NEAT1-202ENST00000501122 SCYL3Q8IZE3 742 aa5.26□□□□□ -1.57
NEAT1-202ENST00000501122 CAB39Q9Y376 341 aaPredicted RBP5.26□□□□□ -1.57
NEAT1-202ENST00000501122 TMEM110-MUSTN1A8MSY1 372 aa5.26□□□□□ -1.57
NEAT1-202ENST00000501122 MEFVO15553 781 aaPredicted RBP5.26□□□□□ -1.57
NEAT1-202ENST00000501122 ACTN4O43707 911 aaKnown RBP5.26□□□□□ -1.57
NEAT1-202ENST00000501122 LMOD1P29536 600 aaPredicted RBP5.26□□□□□ -1.57
NEAT1-202ENST00000501122 KRT76Q01546 638 aa5.26□□□□□ -1.57
NEAT1-202ENST00000501122 ZBTB41Q5SVQ8 909 aa5.26□□□□□ -1.57
NEAT1-202ENST00000501122 AKAP2Q9Y2D5 859 aa5.26□□□□□ -1.57
NEAT1-202ENST00000501122 INPP1P49441 399 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms