RNA–Protein interactions for RNA: ENST00000500215.3

LINC02288-201, Transcript of long intergenic non-protein coding RNA 2288, humanhuman

TSL 2 BASIC

Gene LINC02288, Length 2,924 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02288-201ENST00000500215 LTBP3Q9NS15 1303 aa13.66□□□□□ -0.22
LINC02288-201ENST00000500215 H3BQV1 296 aa13.66□□□□□ -0.22
LINC02288-201ENST00000500215 SPDYE2Q495Y8 402 aa13.66□□□□□ -0.22
LINC02288-201ENST00000500215 IFFO2Q5TF58 517 aa13.66□□□□□ -0.22
LINC02288-201ENST00000500215 FANCBQ8NB91 859 aa13.66□□□□□ -0.22
LINC02288-201ENST00000500215 PNMA1Q8ND90 353 aa13.66□□□□□ -0.22
LINC02288-201ENST00000500215 TMEM47Q9BQJ4 181 aa13.66□□□□□ -0.22
LINC02288-201ENST00000500215 CNTNAP1P78357 1384 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 MCM4P33991 863 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 CATIPQ7Z7H3 387 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 CERS3Q8IU89 383 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 SMARCC2Q8TAQ2 1214 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 KAT14Q9H8E8 782 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 SBF1O95248 1867 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 ZSCAN22P10073 491 aaPredicted RBP13.65□□□□□ -0.22
LINC02288-201ENST00000500215 CEBPZQ03701 1054 aaKnown RBP13.65□□□□□ -0.22
LINC02288-201ENST00000500215 TROAPQ12815 778 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 PRKG1Q13976 671 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 RASA3Q14644 834 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 NTRK3Q16288 839 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 KIF4BQ2VIQ3 1234 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 FBXL16Q8N461 479 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 VPS33BQ9H267 617 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 MYH8P13535 1937 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 SIPA1L1O43166 1804 aa13.65□□□□□ -0.22
LINC02288-201ENST00000500215 FRMPD2Q68DX3 1309 aaPredicted RBP13.64□□□□□ -0.23
LINC02288-201ENST00000500215 USP17L2Q6R6M4 530 aa13.64□□□□□ -0.23
LINC02288-201ENST00000500215 MRIQ9BWK5 157 aa13.64□□□□□ -0.23
LINC02288-201ENST00000500215 FTOQ9C0B1 505 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINC02288-201ENST00000500215 PI4KBQ9UBF8 816 aa13.64□□□□□ -0.23
LINC02288-201ENST00000500215 CLIP2Q9UDT6 1046 aa13.64□□□□□ -0.23
LINC02288-201ENST00000500215 HACL1Q9UJ83 578 aa13.64□□□□□ -0.23
LINC02288-201ENST00000500215 SEPT2Q15019 361 aa13.64□□□□□ -0.23
LINC02288-201ENST00000500215 TFIP11Q9UBB9 837 aaKnown RBP13.64□□□□□ -0.23
LINC02288-201ENST00000500215 CNPY2Q9Y2B0 182 aa13.64□□□□□ -0.23
LINC02288-201ENST00000500215 MYO1BO43795 1136 aa13.63□□□□□ -0.23
LINC02288-201ENST00000500215 F13A1P00488 732 aa13.63□□□□□ -0.23
LINC02288-201ENST00000500215 DNM1Q05193 864 aaKnown RBP13.63□□□□□ -0.23
LINC02288-201ENST00000500215 GZF1Q9H116 711 aaPredicted RBP13.63□□□□□ -0.23
LINC02288-201ENST00000500215 WDR33Q9C0J8 1336 aaKnown RBP13.63□□□□□ -0.23
LINC02288-201ENST00000500215 POLR2AP24928 1970 aaKnown RBP13.63□□□□□ -0.23
LINC02288-201ENST00000500215 FIBPO43427 364 aa13.63□□□□□ -0.23
LINC02288-201ENST00000500215 HIRAP54198 1017 aaPredicted RBP13.63□□□□□ -0.23
LINC02288-201ENST00000500215 CERKLQ49MI3 558 aaPredicted RBP13.63□□□□□ -0.23
LINC02288-201ENST00000500215 ANGEL2Q5VTE6 544 aaKnown RBP13.63□□□□□ -0.23
LINC02288-201ENST00000500215 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
LINC02288-201ENST00000500215 NEDD1Q8NHV4 660 aa13.63□□□□□ -0.23
LINC02288-201ENST00000500215 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC02288-201ENST00000500215 VAT1LQ9HCJ6 419 aa13.63□□□□□ -0.23
LINC02288-201ENST00000500215 KCNJ14Q9UNX9 436 aa13.63□□□□□ -0.23
LINC02288-201ENST00000500215 GH2P01242 217 aa13.63□□□□□ -0.23
LINC02288-201ENST00000500215 ZYXQ15942 572 aaKnown RBP13.63□□□□□ -0.23
LINC02288-201ENST00000500215 ALG1Q9BT22 464 aa13.63□□□□□ -0.23
LINC02288-201ENST00000500215 V9GY48 417 aaPredicted RBP13.63□□□□□ -0.23
LINC02288-201ENST00000500215 PRPF40AO75400 957 aaKnown RBP13.62□□□□□ -0.23
LINC02288-201ENST00000500215 PCP11498 1178 aaKnown RBP13.62□□□□□ -0.23
LINC02288-201ENST00000500215 SRBD1Q8N5C6 995 aaKnown RBP13.62□□□□□ -0.23
LINC02288-201ENST00000500215 UBA5Q9GZZ9 404 aa13.62□□□□□ -0.23
LINC02288-201ENST00000500215 USP17L5A8MUK1 530 aa13.62□□□□□ -0.23
LINC02288-201ENST00000500215 H7C1D1 291 aa13.62□□□□□ -0.23
LINC02288-201ENST00000500215 IGSF3O75054 1194 aa13.62□□□□□ -0.23
LINC02288-201ENST00000500215 C8orf76Q96K31 380 aa13.62□□□□□ -0.23
LINC02288-201ENST00000500215 ZNF287Q9HBT7 754 aa13.62□□□□□ -0.23
LINC02288-201ENST00000500215 GGA3Q9NZ52 723 aa13.62□□□□□ -0.23
LINC02288-201ENST00000500215 SLC35G1Q2M3R5 365 aa13.61□□□□□ -0.23
LINC02288-201ENST00000500215 HOMER1Q86YM7 354 aa13.61□□□□□ -0.23
LINC02288-201ENST00000500215 TMTC2Q8N394 836 aa13.61□□□□□ -0.23
LINC02288-201ENST00000500215 CTCFLQ8NI51 663 aaPredicted RBP13.61□□□□□ -0.23
LINC02288-201ENST00000500215 ZBED3Q96IU2 234 aaPredicted RBP13.61□□□□□ -0.23
LINC02288-201ENST00000500215 GPCPD1Q9NPB8 672 aa13.61□□□□□ -0.23
LINC02288-201ENST00000500215 MTMR4Q9NYA4 1195 aa13.61□□□□□ -0.23
LINC02288-201ENST00000500215 GPRC5DQ9NZD1 345 aa13.61□□□□□ -0.23
LINC02288-201ENST00000500215 DHX16O60231 1041 aaKnown RBP13.61□□□□□ -0.23
LINC02288-201ENST00000500215 ZNF280AP59817 542 aaPredicted RBP13.61□□□□□ -0.23
LINC02288-201ENST00000500215 SSRP1Q08945 709 aaKnown RBP13.61□□□□□ -0.23
LINC02288-201ENST00000500215 NBPF12Q5TAG4 269 aaPredicted RBP13.61□□□□□ -0.23
LINC02288-201ENST00000500215 SPICE1Q8N0Z3 855 aa13.61□□□□□ -0.23
LINC02288-201ENST00000500215 FAM151AQ8WW52 585 aa13.61□□□□□ -0.23
LINC02288-201ENST00000500215 SHISA4Q96DD7 197 aa13.61□□□□□ -0.23
LINC02288-201ENST00000500215 GBP4Q96PP9 640 aa13.61□□□□□ -0.23
LINC02288-201ENST00000500215 NUP88Q99567 741 aaPredicted RBP13.61□□□□□ -0.23
LINC02288-201ENST00000500215 LLPHQ9BRT6 129 aaKnown RBP13.61□□□□□ -0.23
LINC02288-201ENST00000500215 ANP32EQ9BTT0 268 aa13.61□□□□□ -0.23
LINC02288-201ENST00000500215 DHX36Q9H2U1 1008 aaKnown RBP13.61□□□□□ -0.23
LINC02288-201ENST00000500215 VPS54Q9P1Q0 977 aa13.61□□□□□ -0.23
LINC02288-201ENST00000500215 ENTPD3O75355 529 aa13.6□□□□□ -0.23
LINC02288-201ENST00000500215 HMGN5P82970 282 aaKnown RBP13.6□□□□□ -0.23
LINC02288-201ENST00000500215 GPKOWQ92917 476 aaPredicted RBP eCLIP13.6□□□□□ -0.23
LINC02288-201ENST00000500215 KIF28PB7ZC32 967 aa13.6□□□□□ -0.23
LINC02288-201ENST00000500215 SLC16A2P36021 539 aa13.6□□□□□ -0.23
LINC02288-201ENST00000500215 DGKZQ13574 1117 aa13.6□□□□□ -0.23
LINC02288-201ENST00000500215 CPLX2Q6PUV4 134 aaKnown RBP13.6□□□□□ -0.23
LINC02288-201ENST00000500215 KCTD1Q719H9 257 aa13.6□□□□□ -0.23
LINC02288-201ENST00000500215 GLIS2Q9BZE0 524 aaPredicted RBP13.6□□□□□ -0.23
LINC02288-201ENST00000500215 DEFB129Q9H1M3 183 aa13.6□□□□□ -0.23
LINC02288-201ENST00000500215 PCNTO95613 3336 aa13.6□□□□□ -0.23
LINC02288-201ENST00000500215 ADAMTS3O15072 1205 aa13.6□□□□□ -0.23
LINC02288-201ENST00000500215 EEF2P13639 858 aaKnown RBP13.6□□□□□ -0.23
LINC02288-201ENST00000500215 ECE1P42892 770 aa13.6□□□□□ -0.23
LINC02288-201ENST00000500215 ABCB5Q2M3G0 1257 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms