RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 PRRT2Q7Z6L0 340 aaPredicted RBP18.93■□□□□ 0.62
SSBP1-214ENST00000498107 CCDC84Q86UT8 332 aaPredicted RBP18.93■□□□□ 0.62
SSBP1-214ENST00000498107 FEZ1Q99689 392 aa18.93■□□□□ 0.62
SSBP1-214ENST00000498107 CNNM2Q9H8M5 875 aa18.93■□□□□ 0.62
SSBP1-214ENST00000498107 ZCCHC17Q9NP64 241 aaKnown RBP18.93■□□□□ 0.62
SSBP1-214ENST00000498107 WBP1LQ9NX94 342 aa18.93■□□□□ 0.62
SSBP1-214ENST00000498107 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.93■□□□□ 0.62
SSBP1-214ENST00000498107 TSPY2A6NKD2 308 aa18.92■□□□□ 0.62
SSBP1-214ENST00000498107 RANBP6O60518 1105 aaKnown RBP18.92■□□□□ 0.62
SSBP1-214ENST00000498107 GUCY1A2P33402 732 aa18.92■□□□□ 0.62
SSBP1-214ENST00000498107 TFAP4Q01664 338 aa18.92■□□□□ 0.62
SSBP1-214ENST00000498107 ICA1Q05084 483 aa18.92■□□□□ 0.62
SSBP1-214ENST00000498107 SHROOM1Q2M3G4 852 aaPredicted RBP18.92■□□□□ 0.62
SSBP1-214ENST00000498107 SH3D19Q5HYK7 790 aa18.92■□□□□ 0.62
SSBP1-214ENST00000498107 IFNL1Q8IU54 200 aa18.92■□□□□ 0.62
SSBP1-214ENST00000498107 PROCA1Q8NCQ7 364 aaPredicted RBP18.92■□□□□ 0.62
SSBP1-214ENST00000498107 NEDD1Q8NHV4 660 aa18.92■□□□□ 0.62
SSBP1-214ENST00000498107 BRI3BPQ8WY22 251 aa18.92■□□□□ 0.62
SSBP1-214ENST00000498107 SAGE1Q9NXZ1 904 aa18.92■□□□□ 0.62
SSBP1-214ENST00000498107 TMOD4Q9NZQ9 345 aa18.92■□□□□ 0.62
SSBP1-214ENST00000498107 RBM8AQ9Y5S9 174 aaKnown RBP18.92■□□□□ 0.62
SSBP1-214ENST00000498107 PLIN4Q96Q06 1357 aa18.92■□□□□ 0.62
SSBP1-214ENST00000498107 TRDNQ13061 729 aa18.91■□□□□ 0.62
SSBP1-214ENST00000498107 MTMR2Q13614 643 aa18.91■□□□□ 0.62
SSBP1-214ENST00000498107 RRP12Q5JTH9 1297 aaKnown RBP18.91■□□□□ 0.62
SSBP1-214ENST00000498107 RNF20Q5VTR2 975 aa18.91■□□□□ 0.62
SSBP1-214ENST00000498107 USP17L2Q6R6M4 530 aa18.91■□□□□ 0.62
SSBP1-214ENST00000498107 ANKRD23Q86SG2 305 aa18.91■□□□□ 0.62
SSBP1-214ENST00000498107 ESR2Q92731 530 aa18.91■□□□□ 0.62
SSBP1-214ENST00000498107 KRT23Q9C075 422 aa18.91■□□□□ 0.62
SSBP1-214ENST00000498107 KIAA1683Q9H0B3 1180 aa18.91■□□□□ 0.62
SSBP1-214ENST00000498107 PTPRFP10586 1907 aa18.9■□□□□ 0.62
SSBP1-214ENST00000498107 EPB41L2O43491 1005 aaKnown RBP18.9■□□□□ 0.62
SSBP1-214ENST00000498107 HMGCS2P54868 508 aa18.9■□□□□ 0.62
SSBP1-214ENST00000498107 PABPC4Q13310 644 aaKnown RBP eCLIP18.9■□□□□ 0.621e-38■■■□□ 18.4
SSBP1-214ENST00000498107 GADL1Q6ZQY3 521 aa18.9■□□□□ 0.62
SSBP1-214ENST00000498107 TBC1D10CQ8IV04 446 aa18.9■□□□□ 0.62
SSBP1-214ENST00000498107 NBPF3Q9H094 633 aa18.9■□□□□ 0.62
SSBP1-214ENST00000498107 IGF2BP3O00425 579 aaKnown RBP eCLIP18.89■□□□□ 0.61
SSBP1-214ENST00000498107 CYP21A2P08686 494 aa18.89■□□□□ 0.61
SSBP1-214ENST00000498107 CCDC178Q5BJE1 867 aa18.89■□□□□ 0.61
SSBP1-214ENST00000498107 FAM47AQ5JRC9 791 aa18.89■□□□□ 0.61
SSBP1-214ENST00000498107 PTPN18Q99952 460 aa18.89■□□□□ 0.61
SSBP1-214ENST00000498107 RNF186Q9NXI6 227 aa18.89■□□□□ 0.61
SSBP1-214ENST00000498107 NYAP2Q9P242 653 aa18.89■□□□□ 0.61
SSBP1-214ENST00000498107 SYNPO2Q9UMS6 1093 aa18.89■□□□□ 0.61
SSBP1-214ENST00000498107 SLC45A1Q9Y2W3 748 aa18.89■□□□□ 0.61
SSBP1-214ENST00000498107 GREB1LQ9C091 1923 aaPredicted RBP18.89■□□□□ 0.61
SSBP1-214ENST00000498107 IGKV6D-41A0A0C4DH26 115 aa18.88■□□□□ 0.61
SSBP1-214ENST00000498107 BTBD19C9JJ37 291 aa18.88■□□□□ 0.61
SSBP1-214ENST00000498107 TTLL1O95922 423 aa18.88■□□□□ 0.61
SSBP1-214ENST00000498107 EEF2P13639 858 aaKnown RBP18.88■□□□□ 0.61
SSBP1-214ENST00000498107 ATP2B2Q01814 1243 aa18.88■□□□□ 0.61
SSBP1-214ENST00000498107 ACER1Q8TDN7 264 aa18.88■□□□□ 0.61
SSBP1-214ENST00000498107 C12orf42Q96LP6 360 aa18.88■□□□□ 0.61
SSBP1-214ENST00000498107 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.88■□□□□ 0.61
SSBP1-214ENST00000498107 INCENPQ9NQS7 918 aa18.88■□□□□ 0.61
SSBP1-214ENST00000498107 TCP11L1Q9NUJ3 509 aa18.88■□□□□ 0.61
SSBP1-214ENST00000498107 MTMR4Q9NYA4 1195 aa18.88■□□□□ 0.61
SSBP1-214ENST00000498107 AGTPBP1Q9UPW5 1226 aa18.88■□□□□ 0.61
SSBP1-214ENST00000498107 TMX2Q9Y320 296 aa18.88■□□□□ 0.61
SSBP1-214ENST00000498107 TRPA1O75762 1119 aa18.87■□□□□ 0.61
SSBP1-214ENST00000498107 MOGSQ13724 837 aa18.87■□□□□ 0.61
SSBP1-214ENST00000498107 NECTIN1Q15223 517 aa18.87■□□□□ 0.61
SSBP1-214ENST00000498107 RALYLQ86SE5 291 aaKnown RBP18.87■□□□□ 0.61
SSBP1-214ENST00000498107 IQCA1Q86XH1 822 aa18.87■□□□□ 0.61
SSBP1-214ENST00000498107 LPAR1Q92633 364 aa18.87■□□□□ 0.61
SSBP1-214ENST00000498107 CEP95Q96GE4 821 aa18.87■□□□□ 0.61
SSBP1-214ENST00000498107 CFHR5Q9BXR6 569 aa18.87■□□□□ 0.61
SSBP1-214ENST00000498107 ZFYVE28Q9HCC9 887 aa18.87■□□□□ 0.61
SSBP1-214ENST00000498107 GOPCQ9HD26 462 aa18.87■□□□□ 0.61
SSBP1-214ENST00000498107 PNMA3Q9UL41 463 aa18.87■□□□□ 0.61
SSBP1-214ENST00000498107 TACC3Q9Y6A5 838 aa18.87■□□□□ 0.61
SSBP1-214ENST00000498107 LOC285556D6RIA3 1793 aa18.86■□□□□ 0.61
SSBP1-214ENST00000498107 NEDD4P46934 1319 aa18.86■□□□□ 0.61
SSBP1-214ENST00000498107 PDHXO00330 501 aa18.86■□□□□ 0.61
SSBP1-214ENST00000498107 HSPA1AP0DMV8 641 aaKnown RBP18.86■□□□□ 0.61
SSBP1-214ENST00000498107 HSPA1BP0DMV9 641 aaKnown RBP18.86■□□□□ 0.61
SSBP1-214ENST00000498107 ZKSCAN1P17029 563 aaPredicted RBP18.86■□□□□ 0.61
SSBP1-214ENST00000498107 TAF1CQ15572 869 aaPredicted RBP18.86■□□□□ 0.61
SSBP1-214ENST00000498107 CREB3L3Q68CJ9 461 aa18.86■□□□□ 0.61
SSBP1-214ENST00000498107 FAM43AQ8N2R8 423 aa18.86■□□□□ 0.61
SSBP1-214ENST00000498107 NCOA7Q8NI08 942 aa18.86■□□□□ 0.61
SSBP1-214ENST00000498107 MKL1Q969V6 931 aa18.86■□□□□ 0.61
SSBP1-214ENST00000498107 PARK7Q99497 189 aaKnown RBP18.86■□□□□ 0.61
SSBP1-214ENST00000498107 PCNTO95613 3336 aa18.86■□□□□ 0.61
SSBP1-214ENST00000498107 A0A1W2PRG0 241 aa18.85■□□□□ 0.61
SSBP1-214ENST00000498107 E7EWF7 191 aa18.85■□□□□ 0.61
SSBP1-214ENST00000498107 SLC27A2O14975 620 aa18.85■□□□□ 0.61
SSBP1-214ENST00000498107 KDM4AO75164 1064 aa18.85■□□□□ 0.61
SSBP1-214ENST00000498107 OSBPP22059 807 aa18.85■□□□□ 0.61
SSBP1-214ENST00000498107 ZYXQ15942 572 aaKnown RBP18.85■□□□□ 0.61
SSBP1-214ENST00000498107 GPAT2Q6NUI2 795 aa18.85■□□□□ 0.61
SSBP1-214ENST00000498107 CLEC10AQ8IUN9 316 aa18.85■□□□□ 0.61
SSBP1-214ENST00000498107 SIAH1Q8IUQ4 282 aa18.85■□□□□ 0.61
SSBP1-214ENST00000498107 TTC14Q96N46 770 aa18.85■□□□□ 0.61
SSBP1-214ENST00000498107 VCPKMTQ9H867 229 aa18.85■□□□□ 0.61
SSBP1-214ENST00000498107 EMILIN3Q9NT22 766 aa18.85■□□□□ 0.61
SSBP1-214ENST00000498107 CLIP2Q9UDT6 1046 aa18.85■□□□□ 0.61
SSBP1-214ENST00000498107 STX8Q9UNK0 236 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms