RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 GPAT2Q6NUI2 795 aa19.24■□□□□ 0.67
FAM3A-220ENST00000497506 CLEC10AQ8IUN9 316 aa19.24■□□□□ 0.67
FAM3A-220ENST00000497506 FAM43AQ8N2R8 423 aa19.24■□□□□ 0.67
FAM3A-220ENST00000497506 U3KPZ7 1027 aaPredicted RBP19.24■□□□□ 0.67
FAM3A-220ENST00000497506 IGKV6D-41A0A0C4DH26 115 aa19.23■□□□□ 0.67
FAM3A-220ENST00000497506 A0A1W2PRG0 241 aa19.23■□□□□ 0.67
FAM3A-220ENST00000497506 USP17L10C9JJH3 530 aa19.23■□□□□ 0.67
FAM3A-220ENST00000497506 TRPA1O75762 1119 aa19.23■□□□□ 0.67
FAM3A-220ENST00000497506 HMGCS2P54868 508 aa19.23■□□□□ 0.67
FAM3A-220ENST00000497506 DGKZQ13574 1117 aa19.23■□□□□ 0.67
FAM3A-220ENST00000497506 MTMR2Q13614 643 aa19.23■□□□□ 0.67
FAM3A-220ENST00000497506 FAM47AQ5JRC9 791 aa19.23■□□□□ 0.67
FAM3A-220ENST00000497506 KIAA1211Q6ZU35 1233 aa19.23■□□□□ 0.67
FAM3A-220ENST00000497506 STAG1Q8WVM7 1258 aa19.23■□□□□ 0.67
FAM3A-220ENST00000497506 BEGAINQ9BUH8 593 aa19.23■□□□□ 0.67
FAM3A-220ENST00000497506 SAGE1Q9NXZ1 904 aa19.23■□□□□ 0.67
FAM3A-220ENST00000497506 GTF3C3Q9Y5Q9 886 aa19.23■□□□□ 0.67
FAM3A-220ENST00000497506 PLIN4Q96Q06 1357 aa19.22■□□□□ 0.67
FAM3A-220ENST00000497506 C19orf81C9J6K1 198 aa19.22■□□□□ 0.67
FAM3A-220ENST00000497506 FOXN1O15353 648 aa19.22■□□□□ 0.67
FAM3A-220ENST00000497506 CA12O43570 354 aa19.22■□□□□ 0.67
FAM3A-220ENST00000497506 ALDH1A1P00352 501 aa19.22■□□□□ 0.67
FAM3A-220ENST00000497506 TFAP4Q01664 338 aa19.22■□□□□ 0.67
FAM3A-220ENST00000497506 OTUD7BQ6GQQ9 843 aa19.22■□□□□ 0.67
FAM3A-220ENST00000497506 GADL1Q6ZQY3 521 aa19.22■□□□□ 0.67
FAM3A-220ENST00000497506 MFSD6Q6ZSS7 791 aa19.22■□□□□ 0.67
FAM3A-220ENST00000497506 FASTKD5Q7L8L6 764 aaKnown RBP19.22■□□□□ 0.67
FAM3A-220ENST00000497506 ANKRD23Q86SG2 305 aa19.22■□□□□ 0.67
FAM3A-220ENST00000497506 PROCA1Q8NCQ7 364 aaPredicted RBP19.22■□□□□ 0.67
FAM3A-220ENST00000497506 NEDD1Q8NHV4 660 aa19.22■□□□□ 0.67
FAM3A-220ENST00000497506 NKX2-3Q8TAU0 364 aa19.22■□□□□ 0.67
FAM3A-220ENST00000497506 KIAA1683Q9H0B3 1180 aa19.22■□□□□ 0.67
FAM3A-220ENST00000497506 KANSL2Q9H9L4 492 aa19.22■□□□□ 0.67
FAM3A-220ENST00000497506 ANO2Q9NQ90 1003 aa19.22■□□□□ 0.67
FAM3A-220ENST00000497506 RBM8AQ9Y5S9 174 aaKnown RBP19.22■□□□□ 0.67
FAM3A-220ENST00000497506 CYP21A2P08686 494 aa19.21■□□□□ 0.67
FAM3A-220ENST00000497506 PCP11498 1178 aaKnown RBP19.21■□□□□ 0.67
FAM3A-220ENST00000497506 ICA1Q05084 483 aa19.21■□□□□ 0.67
FAM3A-220ENST00000497506 CFHR5Q9BXR6 569 aa19.21■□□□□ 0.67
FAM3A-220ENST00000497506 RNF41Q9H4P4 317 aaPredicted RBP19.21■□□□□ 0.67
FAM3A-220ENST00000497506 ZCCHC17Q9NP64 241 aaKnown RBP19.21■□□□□ 0.67
FAM3A-220ENST00000497506 EMILIN3Q9NT22 766 aa19.21■□□□□ 0.67
FAM3A-220ENST00000497506 NEDD4P46934 1319 aa19.21■□□□□ 0.67
FAM3A-220ENST00000497506 RANBP6O60518 1105 aaKnown RBP19.2■□□□□ 0.66
FAM3A-220ENST00000497506 TSPY3P0CV98 308 aa19.2■□□□□ 0.66
FAM3A-220ENST00000497506 TSPY8P0CW00 308 aa19.2■□□□□ 0.66
FAM3A-220ENST00000497506 EEF2P13639 858 aaKnown RBP19.2■□□□□ 0.66
FAM3A-220ENST00000497506 RRP12Q5JTH9 1297 aaKnown RBP19.2■□□□□ 0.66
FAM3A-220ENST00000497506 TREML2Q5T2D2 321 aa19.2■□□□□ 0.66
FAM3A-220ENST00000497506 USP17L2Q6R6M4 530 aa19.2■□□□□ 0.66
FAM3A-220ENST00000497506 R3HDMLQ9H3Y0 253 aa19.2■□□□□ 0.66
FAM3A-220ENST00000497506 TOMM22Q9NS69 142 aa19.2■□□□□ 0.66
FAM3A-220ENST00000497506 TSKSQ9UJT2 592 aa19.2■□□□□ 0.66
FAM3A-220ENST00000497506 AGTPBP1Q9UPW5 1226 aa19.2■□□□□ 0.66
FAM3A-220ENST00000497506 TMX2Q9Y320 296 aa19.2■□□□□ 0.66
FAM3A-220ENST00000497506 MYH4Q9Y623 1939 aa19.19■□□□□ 0.66
FAM3A-220ENST00000497506 TSPY2A6NKD2 308 aa19.19■□□□□ 0.66
FAM3A-220ENST00000497506 PDHXO00330 501 aa19.19■□□□□ 0.66
FAM3A-220ENST00000497506 TBC1D8O95759 1140 aa19.19■□□□□ 0.66
FAM3A-220ENST00000497506 ZYXQ15942 572 aaKnown RBP19.19■□□□□ 0.66
FAM3A-220ENST00000497506 CEP95Q96GE4 821 aa19.19■□□□□ 0.66
FAM3A-220ENST00000497506 C12orf42Q96LP6 360 aa19.19■□□□□ 0.66
FAM3A-220ENST00000497506 FEZ1Q99689 392 aa19.19■□□□□ 0.66
FAM3A-220ENST00000497506 ARHGEF10LQ9HCE6 1279 aa19.19■□□□□ 0.66
FAM3A-220ENST00000497506 IL17RBQ9NRM6 502 aa19.19■□□□□ 0.66
FAM3A-220ENST00000497506 MTMR4Q9NYA4 1195 aa19.19■□□□□ 0.66
FAM3A-220ENST00000497506 TMOD4Q9NZQ9 345 aa19.19■□□□□ 0.66
FAM3A-220ENST00000497506 NYAP2Q9P242 653 aa19.19■□□□□ 0.66
FAM3A-220ENST00000497506 TAF6LQ9Y6J9 622 aa19.19■□□□□ 0.66
FAM3A-220ENST00000497506 HSPA8P11142 646 aaKnown RBP19.18■□□□□ 0.66
FAM3A-220ENST00000497506 USP14P54578 494 aa19.18■□□□□ 0.66
FAM3A-220ENST00000497506 CRHR2Q13324 411 aa19.18■□□□□ 0.66
FAM3A-220ENST00000497506 NECTIN1Q15223 517 aa19.18■□□□□ 0.66
FAM3A-220ENST00000497506 SLC45A1Q9Y2W3 748 aa19.18■□□□□ 0.66
FAM3A-220ENST00000497506 NMT2O60551 498 aa19.17■□□□□ 0.66
FAM3A-220ENST00000497506 CTCFP49711 727 aaPredicted RBP19.17■□□□□ 0.66
FAM3A-220ENST00000497506 ATP2B2Q01814 1243 aa19.17■□□□□ 0.66
FAM3A-220ENST00000497506 TAF1CQ15572 869 aaPredicted RBP19.17■□□□□ 0.66
FAM3A-220ENST00000497506 KIAA1755Q5JYT7 1200 aa19.17■□□□□ 0.66
FAM3A-220ENST00000497506 MKL1Q969V6 931 aa19.17■□□□□ 0.66
FAM3A-220ENST00000497506 SH2D4AQ9H788 454 aa19.17■□□□□ 0.66
FAM3A-220ENST00000497506 B4E1Z4 1266 aa19.16■□□□□ 0.66
FAM3A-220ENST00000497506 NOVP48745 357 aa19.16■□□□□ 0.66
FAM3A-220ENST00000497506 STOX1Q6ZVD7 989 aa19.16■□□□□ 0.66
FAM3A-220ENST00000497506 ESR2Q92731 530 aa19.16■□□□□ 0.66
FAM3A-220ENST00000497506 VCPKMTQ9H867 229 aa19.16■□□□□ 0.66
FAM3A-220ENST00000497506 CNNM2Q9H8M5 875 aa19.16■□□□□ 0.66
FAM3A-220ENST00000497506 TCP11L1Q9NUJ3 509 aa19.16■□□□□ 0.66
FAM3A-220ENST00000497506 CLIP2Q9UDT6 1046 aa19.16■□□□□ 0.66
FAM3A-220ENST00000497506 E7EWF7 191 aa19.15■□□□□ 0.66
FAM3A-220ENST00000497506 SLC27A2O14975 620 aa19.15■□□□□ 0.66
FAM3A-220ENST00000497506 KDM4AO75164 1064 aa19.15■□□□□ 0.66
FAM3A-220ENST00000497506 TTLL1O95922 423 aa19.15■□□□□ 0.66
FAM3A-220ENST00000497506 CYP2C8P10632 490 aa19.15■□□□□ 0.66
FAM3A-220ENST00000497506 VCAM1P19320 739 aa19.15■□□□□ 0.66
FAM3A-220ENST00000497506 HOXA7P31268 230 aaPredicted RBP19.15■□□□□ 0.66
FAM3A-220ENST00000497506 NT5C2P49902 561 aa19.15■□□□□ 0.66
FAM3A-220ENST00000497506 CREB3L3Q68CJ9 461 aa19.15■□□□□ 0.66
FAM3A-220ENST00000497506 KRT23Q9C075 422 aa19.15■□□□□ 0.66
FAM3A-220ENST00000497506 ZFYVE28Q9HCC9 887 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms