RNA–Protein interactions for RNA: ENST00000497393.1

GTF2E1-205, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 1 (best)

Gene GTF2E1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-205ENST00000497393 MRPL42Q9Y6G3 142 aaKnown RBP6.13□□□□□ -1.43
GTF2E1-205ENST00000497393 CAP2P40123 477 aa6.12□□□□□ -1.43
GTF2E1-205ENST00000497393 USP11P51784 963 aa6.12□□□□□ -1.43
GTF2E1-205ENST00000497393 NRG1Q02297 640 aaPredicted RBP6.12□□□□□ -1.43
GTF2E1-205ENST00000497393 TDRD10Q5VZ19 366 aaKnown RBP6.12□□□□□ -1.43
GTF2E1-205ENST00000497393 INTS3Q68E01 1043 aaKnown RBP6.12□□□□□ -1.43
GTF2E1-205ENST00000497393 VHLLQ6RSH7 139 aa6.12□□□□□ -1.43
GTF2E1-205ENST00000497393 ARMC10Q8N2F6 343 aa6.12□□□□□ -1.43
GTF2E1-205ENST00000497393 KCT2Q8NC54 265 aa6.12□□□□□ -1.43
GTF2E1-205ENST00000497393 KLHL6Q8WZ60 621 aa6.12□□□□□ -1.43
GTF2E1-205ENST00000497393 SLC6A18Q96N87 628 aa6.12□□□□□ -1.43
GTF2E1-205ENST00000497393 DCAF1Q9Y4B6 1507 aa6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 RGS13O14921 159 aa6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 PDPK1O15530 556 aa6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 LRIG2O94898 1065 aa6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 NFICP08651 508 aa6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 CHRNA4P43681 627 aa6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 TXNRD3Q86VQ6 643 aa6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 UTP4Q969X6 686 aaKnown RBP6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 ZNF512BQ96KM6 892 aaPredicted RBP6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 MIPEPQ99797 713 aa6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 FOXQ1Q9C009 403 aa6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 CCDC113Q9H0I3 377 aa6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 PHAXQ9H814 394 aaKnown RBP6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 KANSL2Q9H9L4 492 aa6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 PCOLCE2Q9UKZ9 415 aa6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 SLC12A7Q9Y666 1083 aa6.11□□□□□ -1.43
GTF2E1-205ENST00000497393 TLDC2A0PJX2 215 aa6.1□□□□□ -1.43
GTF2E1-205ENST00000497393 KRBA1A5PL33 1030 aa6.1□□□□□ -1.43
GTF2E1-205ENST00000497393 C9IYK1 514 aa6.1□□□□□ -1.43
GTF2E1-205ENST00000497393 BMP3P12645 472 aa6.1□□□□□ -1.43
GTF2E1-205ENST00000497393 GBP1P32455 592 aa6.1□□□□□ -1.43
GTF2E1-205ENST00000497393 CDK5R2Q13319 367 aa6.1□□□□□ -1.43
GTF2E1-205ENST00000497393 RASGRF1Q13972 1273 aa6.1□□□□□ -1.43
GTF2E1-205ENST00000497393 SDE2Q6IQ49 451 aa6.1□□□□□ -1.43
GTF2E1-205ENST00000497393 KIAA1211LQ6NV74 962 aa6.1□□□□□ -1.43
GTF2E1-205ENST00000497393 DZIP1LQ8IYY4 767 aaKnown RBP6.1□□□□□ -1.43
GTF2E1-205ENST00000497393 PPP1R13LQ8WUF5 828 aa6.1□□□□□ -1.43
GTF2E1-205ENST00000497393 MYRFLQ96LU7 910 aa6.1□□□□□ -1.43
GTF2E1-205ENST00000497393 CCDC74BQ96LY2 380 aa6.1□□□□□ -1.43
GTF2E1-205ENST00000497393 DNAJC7Q99615 494 aa6.1□□□□□ -1.43
GTF2E1-205ENST00000497393 ZNF214Q9UL59 606 aaPredicted RBP6.1□□□□□ -1.43
GTF2E1-205ENST00000497393 SLITRK5O94991 958 aa6.09□□□□□ -1.43
GTF2E1-205ENST00000497393 MAP4P27816 1152 aaKnown RBP6.09□□□□□ -1.43
GTF2E1-205ENST00000497393 RXRBP28702 533 aa6.09□□□□□ -1.43
GTF2E1-205ENST00000497393 UVSSAQ2YD98 709 aa6.09□□□□□ -1.43
GTF2E1-205ENST00000497393 GNPTABQ3T906 1256 aa6.09□□□□□ -1.43
GTF2E1-205ENST00000497393 MTERF2Q49AM1 385 aa6.09□□□□□ -1.43
GTF2E1-205ENST00000497393 SPATC1Q76KD6 591 aa6.09□□□□□ -1.43
GTF2E1-205ENST00000497393 LRP10Q7Z4F1 713 aa6.09□□□□□ -1.43
GTF2E1-205ENST00000497393 DNAJB8Q8NHS0 232 aa6.09□□□□□ -1.43
GTF2E1-205ENST00000497393 RIN3Q8TB24 985 aa6.09□□□□□ -1.43
GTF2E1-205ENST00000497393 EZH1Q92800 747 aaPredicted RBP6.09□□□□□ -1.43
GTF2E1-205ENST00000497393 RNPC3Q96LT9 517 aaKnown RBP6.09□□□□□ -1.43
GTF2E1-205ENST00000497393 PSMG3-AS1Q96PY0 264 aa6.09□□□□□ -1.43
GTF2E1-205ENST00000497393 PFDN2Q9UHV9 154 aa6.09□□□□□ -1.43
GTF2E1-205ENST00000497393 DIAPH1O60610 1272 aaKnown RBP6.08□□□□□ -1.44
GTF2E1-205ENST00000497393 TP53P04637 393 aaPredicted RBP6.08□□□□□ -1.44
GTF2E1-205ENST00000497393 PMS1P54277 932 aaKnown RBP6.08□□□□□ -1.44
GTF2E1-205ENST00000497393 SLC7A5Q01650 507 aa6.08□□□□□ -1.44
GTF2E1-205ENST00000497393 IFRD2Q12894 506 aaPredicted RBP6.08□□□□□ -1.44
GTF2E1-205ENST00000497393 NCAPHQ15003 741 aa6.08□□□□□ -1.44
GTF2E1-205ENST00000497393 LETMD1Q6P1Q0 360 aa6.08□□□□□ -1.44
GTF2E1-205ENST00000497393 SEZ6L2Q6UXD5 910 aa6.08□□□□□ -1.44
GTF2E1-205ENST00000497393 CD163Q86VB7 1156 aa6.08□□□□□ -1.44
GTF2E1-205ENST00000497393 FAM20CQ8IXL6 584 aa6.08□□□□□ -1.44
GTF2E1-205ENST00000497393 LILRB2Q8N423 598 aa6.08□□□□□ -1.44
GTF2E1-205ENST00000497393 SUCOQ9UBS9 1254 aaKnown RBP6.08□□□□□ -1.44
GTF2E1-205ENST00000497393 COL17A1Q9UMD9 1497 aaPredicted RBP6.08□□□□□ -1.44
GTF2E1-205ENST00000497393 CADPSQ9ULU8 1353 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 FAM95CA0A1B0GW59 222 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 SUSD5O60279 629 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 CLEC3AO75596 197 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 CCNFP41002 786 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 MAP7Q14244 749 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 SLC10A6Q3KNW5 377 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 AXDND1Q5T1B0 1012 aaPredicted RBP6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 DCAF15Q66K64 600 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 CDH24Q86UP0 819 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 TOP6BLQ8N6T0 577 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 MFSD2AQ8NA29 543 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 SH3TC2Q8TF17 1288 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 SSBP4Q9BWG4 385 aaPredicted RBP6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 YIPF2Q9BWQ6 316 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 KCNF1Q9H3M0 494 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 PRDM10Q9NQV6 1147 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 C1GALT1Q9NS00 363 aa6.07□□□□□ -1.44
GTF2E1-205ENST00000497393 C1QTNF9BB2RNN3 333 aa6.06□□□□□ -1.44
GTF2E1-205ENST00000497393 CBFA2T2O43439 604 aa6.06□□□□□ -1.44
GTF2E1-205ENST00000497393 LEFTY1O75610 366 aa6.06□□□□□ -1.44
GTF2E1-205ENST00000497393 TCEAL1Q15170 157 aa6.06□□□□□ -1.44
GTF2E1-205ENST00000497393 ZNF662Q6ZS27 426 aa6.06□□□□□ -1.44
GTF2E1-205ENST00000497393 EEPD1Q7L9B9 569 aa6.06□□□□□ -1.44
GTF2E1-205ENST00000497393 ALYREFQ86V81 257 aaKnown RBP6.06□□□□□ -1.44
GTF2E1-205ENST00000497393 DCAF5Q96JK2 942 aa6.06□□□□□ -1.44
GTF2E1-205ENST00000497393 HAUS7Q99871 368 aa6.06□□□□□ -1.44
GTF2E1-205ENST00000497393 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.06□□□□□ -1.44
GTF2E1-205ENST00000497393 SUSD2Q9UGT4 822 aa6.06□□□□□ -1.44
GTF2E1-205ENST00000497393 ZMYM5Q9UJ78 669 aa6.06□□□□□ -1.44
GTF2E1-205ENST00000497393 CNTNAP4Q9C0A0 1308 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms