RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 A0A096LPE4 126 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 A0A1W2PPZ6 126 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 A0A1W2PQH9 124 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 PHF20L1A8MW92 1017 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 PAGE1O75459 146 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 GJB6O95452 261 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 THBS1P07996 1170 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 POU3F2P20265 443 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 NME2P22392 152 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 CTSOP43234 321 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 EPHB1P54762 984 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 RPL6Q02878 288 aaKnown RBP3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 FAM160A1Q05DH4 1040 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 HYAL2Q12891 473 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 LRRFIP1Q32MZ4 808 aaKnown RBP3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 RASIP1Q5U651 963 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 KANK3Q6NY19 840 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 BNC2Q6ZN30 1099 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 BICDL1Q6ZP65 573 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 LYSMD3Q7Z3D4 306 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 RNF180Q86T96 592 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 PDZD3Q86UT5 571 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 CCAR1Q8IX12 1150 aaKnown RBP3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 AFAP1L2Q8N4X5 818 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 PRPF38AQ8NAV1 312 aaKnown RBP3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 SLC16A10Q8TF71 515 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 CPLX3Q8WVH0 158 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 KISS1RQ969F8 398 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 MFSD3Q96ES6 412 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 FAM163AQ96GL9 167 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 INSM2Q96T92 566 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 OSMRQ99650 979 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 ZCCHC2Q9C0B9 1178 aaKnown RBP3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 RRAGCQ9HB90 399 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 TMEM39AQ9NV64 488 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 MAPRE3Q9UPY8 281 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 ATP8A1Q9Y2Q0 1164 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 SAMM50Q9Y512 469 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 PLEKHG1Q9ULL1 1385 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 PXDNQ92626 1479 aa3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 SETXQ7Z333 2677 aaKnown RBP3.33□□□□□ -1.88
CKS1BP2-201ENST00000497342 CACNA1BQ00975 2339 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 LAMA2P24043 3122 aaKnown RBP3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 BRCA2P51587 3418 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 TNFRSF10CO14798 259 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 KHNYNO15037 678 aaKnown RBP3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 EIF4EBP3O60516 100 aaPredicted RBP3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 NPTXRO95502 500 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 MAP4K4O95819 1239 aaPredicted RBP3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 F11P03951 625 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 SELPP16109 830 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 ZNF143P52747 638 aaPredicted RBP3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 GPLD1P80108 840 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 MAP2K1Q02750 393 aaPredicted RBP3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 PLAURQ03405 335 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 CLCQ05315 142 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 TNP2Q05952 138 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 POU4F2Q12837 409 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 NCAPHQ15003 741 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 LRRC14Q15048 493 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 TXNRD1Q16881 649 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 MTERF2Q49AM1 385 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 SEZ6Q53EL9 994 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 FNDC3BQ53EP0 1204 aaKnown RBP3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 AKAP4Q5JQC9 854 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 HGSNATQ68CP4 663 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 MRM1Q6IN84 353 aaKnown RBP3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 FIGNL1Q6PIW4 674 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 TPTE2Q6XPS3 522 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 DHX37Q8IY37 1157 aaKnown RBP3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 PGBD3Q8N328 593 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 FBXO27Q8NI29 283 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 MORC4Q8TE76 937 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 CEP63Q96MT8 703 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 APBA2Q99767 749 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 ADAM19Q9H013 955 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 MIR1-1HGQ9H1L0 117 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 SOX17Q9H6I2 414 aaPredicted RBP3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 CAAP1Q9H8G2 361 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 TIMMDC1Q9NPL8 285 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 HOMER2Q9NSB8 354 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 BTG4Q9NY30 223 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 HCN2Q9UL51 889 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 AKAP2Q9Y2D5 859 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 POLR3KQ9Y2Y1 108 aaPredicted RBP3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 NPHP3Q7Z494 1330 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 ADGRL2O95490 1459 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 TRPM2O94759 1503 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 PLCH1Q4KWH8 1693 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 COL24A1Q17RW2 1714 aa3.32□□□□□ -1.88
CKS1BP2-201ENST00000497342 PIK3C2BO00750 1634 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 ADAMTS13Q76LX8 1427 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 PTPRUQ92729 1446 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 KDM2BQ8NHM5 1336 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 SYNGAP1Q96PV0 1343 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 DNAJC25-GNG10A0A024R161 153 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 GSG1L2A8MUP6 293 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 C11orf95C9JLR9 678 aaPredicted RBP3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 J3QL48 77 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 GFRA2O00451 464 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms