RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 GREB1LQ9C091 1923 aaPredicted RBP17.24■□□□□ 0.35
VTI1A-209ENST00000496445 SMIM22K7EJ46 135 aa17.24■□□□□ 0.35
VTI1A-209ENST00000496445 INHAP05111 366 aa17.24■□□□□ 0.35
VTI1A-209ENST00000496445 RRP1P56182 461 aaKnown RBP17.24■□□□□ 0.35
VTI1A-209ENST00000496445 UBXN2AP68543 259 aa17.24■□□□□ 0.35
VTI1A-209ENST00000496445 SLC44A5Q8NCS7 719 aa17.24■□□□□ 0.35
VTI1A-209ENST00000496445 FEZ1Q99689 392 aa17.24■□□□□ 0.35
VTI1A-209ENST00000496445 ECHDC1Q9NTX5 307 aa17.24■□□□□ 0.35
VTI1A-209ENST00000496445 BIN2Q9UBW5 565 aaPredicted RBP17.24■□□□□ 0.35
VTI1A-209ENST00000496445 CEP290O15078 2479 aa17.23■□□□□ 0.35
VTI1A-209ENST00000496445 GJB1P08034 283 aa17.23■□□□□ 0.35
VTI1A-209ENST00000496445 VCAM1P19320 739 aa17.23■□□□□ 0.35
VTI1A-209ENST00000496445 GJA8P48165 433 aa17.23■□□□□ 0.35
VTI1A-209ENST00000496445 SEPT2Q15019 361 aa17.23■□□□□ 0.35
VTI1A-209ENST00000496445 DYNLL2Q96FJ2 89 aa17.23■□□□□ 0.35
VTI1A-209ENST00000496445 KIAA1683Q9H0B3 1180 aa17.23■□□□□ 0.35
VTI1A-209ENST00000496445 PUS7LQ9H0K6 701 aaKnown RBP17.23■□□□□ 0.35
VTI1A-209ENST00000496445 RNF208Q9H0X6 261 aa17.23■□□□□ 0.35
VTI1A-209ENST00000496445 CABP5Q9NP86 173 aa17.23■□□□□ 0.35
VTI1A-209ENST00000496445 RBPJLQ9UBG7 517 aa17.23■□□□□ 0.35
VTI1A-209ENST00000496445 GJD2Q9UKL4 321 aa17.23■□□□□ 0.35
VTI1A-209ENST00000496445 CYP2D7A0A087X1C5 515 aa17.22■□□□□ 0.35
VTI1A-209ENST00000496445 ATP8A2Q9NTI2 1148 aa17.22■□□□□ 0.35
VTI1A-209ENST00000496445 TAOK2Q9UL54 1235 aa17.22■□□□□ 0.35
VTI1A-209ENST00000496445 RANBP2P49792 3224 aaKnown RBP17.22■□□□□ 0.35
VTI1A-209ENST00000496445 A0A1W2PRG0 241 aa17.21■□□□□ 0.35
VTI1A-209ENST00000496445 CNMDO75829 334 aa17.21■□□□□ 0.35
VTI1A-209ENST00000496445 SLC34A2O95436 690 aa17.21■□□□□ 0.35
VTI1A-209ENST00000496445 USP14P54578 494 aa17.21■□□□□ 0.35
VTI1A-209ENST00000496445 ERVK-9P63128 1117 aa17.21■□□□□ 0.35
VTI1A-209ENST00000496445 ERVK-24P63145 666 aa17.21■□□□□ 0.35
VTI1A-209ENST00000496445 CACNB1Q02641 598 aaPredicted RBP17.21■□□□□ 0.35
VTI1A-209ENST00000496445 Q3C1V9 767 aa17.21■□□□□ 0.35
VTI1A-209ENST00000496445 ZSCAN25Q6NSZ9 544 aa17.21■□□□□ 0.35
VTI1A-209ENST00000496445 UBE2Q1Q7Z7E8 422 aa17.21■□□□□ 0.35
VTI1A-209ENST00000496445 GPRC5AQ8NFJ5 357 aa17.21■□□□□ 0.35
VTI1A-209ENST00000496445 U2AF1L4Q8WU68 220 aaKnown RBP17.21■□□□□ 0.35
VTI1A-209ENST00000496445 ALPK3Q96L96 1907 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 USP17L15C9J2P7 530 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 USP17L13C9JLJ4 530 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 USP17L11C9JVI0 530 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 USP17L18D6R9N7 530 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 USP17L22D6RA61 530 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 USP17L17D6RBQ6 530 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 USP17L19D6RCP7 530 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 USP17L20D6RJB6 530 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 MPHOSPH10O00566 681 aaKnown RBP17.2■□□□□ 0.34
VTI1A-209ENST00000496445 USP17L24Q0WX57 530 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 CATSPERGQ6ZRH7 1159 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 CLEC10AQ8IUN9 316 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 KBTBD3Q8NAB2 608 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 NKX2-3Q8TAU0 364 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 GTF3C2Q8WUA4 911 aaPredicted RBP17.2■□□□□ 0.34
VTI1A-209ENST00000496445 PAGR1Q9BTK6 254 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 PORCNQ9H237 461 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 PAK6Q9NQU5 681 aaPredicted RBP17.2■□□□□ 0.34
VTI1A-209ENST00000496445 SWAP70Q9UH65 585 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 SLC4A4Q9Y6R1 1079 aa17.2■□□□□ 0.34
VTI1A-209ENST00000496445 HMGCRP04035 888 aa17.19■□□□□ 0.34
VTI1A-209ENST00000496445 AKR1B1P15121 316 aa17.19■□□□□ 0.34
VTI1A-209ENST00000496445 TRIM32Q13049 653 aa17.19■□□□□ 0.34
VTI1A-209ENST00000496445 C12orf60Q5U649 245 aa17.19■□□□□ 0.34
VTI1A-209ENST00000496445 OTUD7AQ8TE49 926 aaPredicted RBP17.19■□□□□ 0.34
VTI1A-209ENST00000496445 GPATCH3Q96I76 525 aa17.19■□□□□ 0.34
VTI1A-209ENST00000496445 FRMPD3Q5JV73 1810 aa17.19■□□□□ 0.34
VTI1A-209ENST00000496445 SPDYE16A6NNV3 312 aaPredicted RBP17.18■□□□□ 0.34
VTI1A-209ENST00000496445 USP17L12C9JPN9 530 aa17.18■□□□□ 0.34
VTI1A-209ENST00000496445 USP17L21D6R901 530 aa17.18■□□□□ 0.34
VTI1A-209ENST00000496445 KIAA1755Q5JYT7 1200 aa17.18■□□□□ 0.34
VTI1A-209ENST00000496445 LBX2Q6XYB7 198 aa17.18■□□□□ 0.34
VTI1A-209ENST00000496445 TMEM179Q6ZVK1 233 aa17.18■□□□□ 0.34
VTI1A-209ENST00000496445 C16orf86Q6ZW13 317 aa17.18■□□□□ 0.34
VTI1A-209ENST00000496445 GPR142Q7Z601 462 aa17.18■□□□□ 0.34
VTI1A-209ENST00000496445 TRIB2Q92519 343 aa17.18■□□□□ 0.34
VTI1A-209ENST00000496445 OSBP2Q969R2 916 aa17.18■□□□□ 0.34
VTI1A-209ENST00000496445 CRBNQ96SW2 442 aa17.18■□□□□ 0.34
VTI1A-209ENST00000496445 RPAP3Q9H6T3 665 aaPredicted RBP17.18■□□□□ 0.34
VTI1A-209ENST00000496445 COL11A1P12107 1806 aaPredicted RBP17.18■□□□□ 0.34
VTI1A-209ENST00000496445 ZNF236Q9UL36 1845 aa17.18■□□□□ 0.34
VTI1A-209ENST00000496445 SGPL1O95470 568 aa17.17■□□□□ 0.34
VTI1A-209ENST00000496445 MAPK4P31152 587 aa17.17■□□□□ 0.34
VTI1A-209ENST00000496445 CDK8P49336 464 aa17.17■□□□□ 0.34
VTI1A-209ENST00000496445 CTR9Q6PD62 1173 aa17.17■□□□□ 0.34
VTI1A-209ENST00000496445 SIAH1Q8IUQ4 282 aa17.17■□□□□ 0.34
VTI1A-209ENST00000496445 PI4K2BQ8TCG2 481 aa17.17■□□□□ 0.34
VTI1A-209ENST00000496445 USP6NLQ92738 828 aa17.17■□□□□ 0.34
VTI1A-209ENST00000496445 DEFB118Q96PH6 123 aa17.17■□□□□ 0.34
VTI1A-209ENST00000496445 STRBPQ96SI9 672 aaKnown RBP17.17■□□□□ 0.34
VTI1A-209ENST00000496445 RABGAP1Q9Y3P9 1069 aa17.17■□□□□ 0.34
VTI1A-209ENST00000496445 SZT2Q5T011 3432 aa17.17■□□□□ 0.34
VTI1A-209ENST00000496445 TTC41PQ6P2S7 1318 aa17.17■□□□□ 0.34
VTI1A-209ENST00000496445 ROBO3Q96MS0 1386 aa17.16■□□□□ 0.34
VTI1A-209ENST00000496445 CYP2B6P20813 491 aa17.16■□□□□ 0.34
VTI1A-209ENST00000496445 MORN1Q5T089 497 aa17.16■□□□□ 0.34
VTI1A-209ENST00000496445 SOCS4Q8WXH5 440 aa17.16■□□□□ 0.34
VTI1A-209ENST00000496445 APPBP2Q92624 585 aa17.16■□□□□ 0.34
VTI1A-209ENST00000496445 YTHDC1Q96MU7 727 aaKnown RBP17.16■□□□□ 0.34
VTI1A-209ENST00000496445 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.16■□□□□ 0.34
VTI1A-209ENST00000496445 BTBD7Q9P203 1132 aa17.16■□□□□ 0.34
VTI1A-209ENST00000496445 ARPP21Q9UBL0 812 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms