RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 TROAPQ12815 778 aa13.2□□□□□ -0.3
CDCA7-208ENST00000496441 PDCL2Q8N4E4 241 aa13.2□□□□□ -0.3
CDCA7-208ENST00000496441 SAMSN1Q9NSI8 373 aaKnown RBP13.2□□□□□ -0.3
CDCA7-208ENST00000496441 LRP5O75197 1615 aa13.2□□□□□ -0.3
CDCA7-208ENST00000496441 SRCAPQ6ZRS2 3230 aa13.2□□□□□ -0.3
CDCA7-208ENST00000496441 RTL9Q8NET4 1388 aa13.2□□□□□ -0.3
CDCA7-208ENST00000496441 USP17L3A6NCW0 530 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 USP17L4A6NCW7 530 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 E4F1Q66K89 784 aaPredicted RBP13.19□□□□□ -0.3
CDCA7-208ENST00000496441 SYT10Q6XYQ8 523 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 BARGINQ6ZT62 677 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 USP17L1Q7RTZ2 530 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 SYMPKQ92797 1274 aaKnown RBP13.19□□□□□ -0.3
CDCA7-208ENST00000496441 TIGD1Q96MW7 591 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 BLZF1Q9H2G9 400 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 NARFQ9UHQ1 456 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 STX8Q9UNK0 236 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 UBAP1LF5GYI3 381 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 GOLGA8HP0CJ92 632 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 ADKP55263 362 aaKnown RBP13.19□□□□□ -0.3
CDCA7-208ENST00000496441 GSDMDP57764 484 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 TFAP4Q01664 338 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 FBXO33Q7Z6M2 555 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 CPLX3Q8WVH0 158 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 PLIN2Q99541 437 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 RNF26Q9BY78 433 aaPredicted RBP13.19□□□□□ -0.3
CDCA7-208ENST00000496441 BCL9LQ86UU0 1499 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 TOP1P11387 765 aaKnown RBP13.19□□□□□ -0.3
CDCA7-208ENST00000496441 MAPKAPK5Q8IW41 473 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 TGFBRAP1Q8WUH2 860 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 MKNK2Q9HBH9 465 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 MAPK8IP1Q9UQF2 711 aa13.19□□□□□ -0.3
CDCA7-208ENST00000496441 NEMFO60524 1076 aa13.18□□□□□ -0.3
CDCA7-208ENST00000496441 GTF2F1P35269 517 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDCA7-208ENST00000496441 PTGDRQ13258 359 aa13.18□□□□□ -0.3
CDCA7-208ENST00000496441 STAG2Q8N3U4 1231 aa13.18□□□□□ -0.3
CDCA7-208ENST00000496441 SH3RF3Q8TEJ3 882 aaPredicted RBP13.18□□□□□ -0.3
CDCA7-208ENST00000496441 BPIFA3Q9BQP9 254 aa13.18□□□□□ -0.3
CDCA7-208ENST00000496441 BRIP1Q9BX63 1249 aa13.18□□□□□ -0.3
CDCA7-208ENST00000496441 ARAP2Q8WZ64 1704 aa13.18□□□□□ -0.3
CDCA7-208ENST00000496441 FAM196AQ6ZSG2 479 aa13.18□□□□□ -0.3
CDCA7-208ENST00000496441 NYXQ9GZU5 481 aa13.18□□□□□ -0.3
CDCA7-208ENST00000496441 HOOK1Q9UJC3 728 aaKnown RBP13.18□□□□□ -0.3
CDCA7-208ENST00000496441 ZNF215Q9UL58 517 aaPredicted RBP13.18□□□□□ -0.3
CDCA7-208ENST00000496441 SRPRBQ9Y5M8 271 aaKnown RBP13.18□□□□□ -0.3
CDCA7-208ENST00000496441 RPS6KA4O75676 772 aa13.17□□□□□ -0.3
CDCA7-208ENST00000496441 MDM2Q00987 491 aaPredicted RBP13.17□□□□□ -0.3
CDCA7-208ENST00000496441 NCBP1Q09161 790 aaKnown RBP13.17□□□□□ -0.3
CDCA7-208ENST00000496441 UBE2Q2Q8WVN8 375 aa13.17□□□□□ -0.3
CDCA7-208ENST00000496441 PHF20Q9BVI0 1012 aa13.17□□□□□ -0.3
CDCA7-208ENST00000496441 USP21Q9UK80 565 aa13.17□□□□□ -0.3
CDCA7-208ENST00000496441 CEP131Q9UPN4 1083 aa13.17□□□□□ -0.3
CDCA7-208ENST00000496441 CACNA1SQ13698 1873 aa13.17□□□□□ -0.3
CDCA7-208ENST00000496441 IKBKBO14920 756 aa13.17□□□□□ -0.3
CDCA7-208ENST00000496441 LDHBP07195 334 aaKnown RBP13.17□□□□□ -0.3
CDCA7-208ENST00000496441 FUT2Q10981 343 aa13.17□□□□□ -0.3
CDCA7-208ENST00000496441 RASSF8Q8NHQ8 419 aa13.17□□□□□ -0.3
CDCA7-208ENST00000496441 PPP1R13BQ96KQ4 1090 aa13.17□□□□□ -0.3
CDCA7-208ENST00000496441 OSBPL5Q9H0X9 879 aaPredicted RBP13.17□□□□□ -0.3
CDCA7-208ENST00000496441 BRMS1Q9HCU9 246 aa13.17□□□□□ -0.3
CDCA7-208ENST00000496441 ANAPC4Q9UJX5 808 aa13.17□□□□□ -0.3
CDCA7-208ENST00000496441 TOM1O60784 492 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 TTC38Q5R3I4 469 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 TMTC3Q6ZXV5 915 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 MAP7D2Q96T17 732 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 KAT14Q9H8E8 782 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 VAT1LQ9HCJ6 419 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 BCORQ6W2J9 1755 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 PAXBP1Q9Y5B6 917 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 WNK3Q9BYP7 1800 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 PRPF3O43395 683 aaKnown RBP13.16□□□□□ -0.3
CDCA7-208ENST00000496441 ACTN4O43707 911 aaKnown RBP13.16□□□□□ -0.3
CDCA7-208ENST00000496441 NRDCO43847 1150 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 PLCD1P51178 756 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 CCDC150Q8NCX0 1101 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 KIF18AQ8NI77 898 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 EEF2KMTQ96G04 330 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 ANKRD2Q9GZV1 360 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 INTS13Q9NVM9 706 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 IMPACTQ9P2X3 320 aa13.16□□□□□ -0.3
CDCA7-208ENST00000496441 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
CDCA7-208ENST00000496441 TSPY3P0CV98 308 aa13.15□□□□□ -0.3
CDCA7-208ENST00000496441 TSPY8P0CW00 308 aa13.15□□□□□ -0.3
CDCA7-208ENST00000496441 TRAPPC3LQ5T215 181 aa13.15□□□□□ -0.3
CDCA7-208ENST00000496441 NYAP1Q6ZVC0 841 aa13.15□□□□□ -0.3
CDCA7-208ENST00000496441 CNBD1Q8NA66 436 aa13.15□□□□□ -0.3
CDCA7-208ENST00000496441 MED15Q96RN5 788 aa13.15□□□□□ -0.3
CDCA7-208ENST00000496441 DNAI1Q9UI46 699 aa13.15□□□□□ -0.3
CDCA7-208ENST00000496441 CNTNAP5Q8WYK1 1306 aa13.15□□□□□ -0.3
CDCA7-208ENST00000496441 SCG2P13521 617 aa13.15□□□□□ -0.3
CDCA7-208ENST00000496441 TM4SF1P30408 202 aa13.15□□□□□ -0.3
CDCA7-208ENST00000496441 PNMA1Q8ND90 353 aa13.15□□□□□ -0.3
CDCA7-208ENST00000496441 LRRN4CLQ8ND94 238 aa13.15□□□□□ -0.3
CDCA7-208ENST00000496441 IGSF3O75054 1194 aa13.14□□□□□ -0.31
CDCA7-208ENST00000496441 CD44P16070 742 aaKnown RBP13.14□□□□□ -0.31
CDCA7-208ENST00000496441 HEATR3Q7Z4Q2 680 aa13.14□□□□□ -0.31
CDCA7-208ENST00000496441 DESI2Q9BSY9 194 aa13.14□□□□□ -0.31
CDCA7-208ENST00000496441 IL17RBQ9NRM6 502 aa13.14□□□□□ -0.31
CDCA7-208ENST00000496441 AHDC1Q5TGY3 1603 aaPredicted RBP13.14□□□□□ -0.31
CDCA7-208ENST00000496441 PP2D1A8MPX8 630 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms