RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ATP2B1P20020 1258 aa12.68□□□□□ -0.38
CMSS1-208ENST00000496116 GSTO1P78417 241 aa12.68□□□□□ -0.38
CMSS1-208ENST00000496116 RBM10P98175 930 aaKnown RBP12.68□□□□□ -0.38
CMSS1-208ENST00000496116 SPECC1Q5M775 1068 aa12.68□□□□□ -0.38
CMSS1-208ENST00000496116 TXNRD3Q86VQ6 643 aa12.68□□□□□ -0.38
CMSS1-208ENST00000496116 AMOTL1Q8IY63 956 aa12.68□□□□□ -0.38
CMSS1-208ENST00000496116 CNBD1Q8NA66 436 aa12.68□□□□□ -0.38
CMSS1-208ENST00000496116 DACH1Q9UI36 760 aa12.68□□□□□ -0.38
CMSS1-208ENST00000496116 TNRC6CQ9HCJ0 1690 aaKnown RBP12.68□□□□□ -0.38
CMSS1-208ENST00000496116 XDHP47989 1333 aa12.68□□□□□ -0.38
CMSS1-208ENST00000496116 BAG3O95817 575 aa12.68□□□□□ -0.38
CMSS1-208ENST00000496116 TNNT1P13805 278 aa12.68□□□□□ -0.38
CMSS1-208ENST00000496116 LMOD1P29536 600 aaPredicted RBP12.68□□□□□ -0.38
CMSS1-208ENST00000496116 KIF5BP33176 963 aa12.68□□□□□ -0.38
CMSS1-208ENST00000496116 FANCCQ00597 558 aa12.68□□□□□ -0.38
CMSS1-208ENST00000496116 TMC6Q7Z403 805 aa12.68□□□□□ -0.38
CMSS1-208ENST00000496116 ZNF804AQ7Z570 1209 aa12.68□□□□□ -0.38
CMSS1-208ENST00000496116 CNTNAP5Q8WYK1 1306 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 USP5P45974 858 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 CCZ1BP86790 482 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 CCZ1P86791 482 aaPredicted RBP12.67□□□□□ -0.38
CMSS1-208ENST00000496116 MDM2Q00987 491 aaPredicted RBP12.67□□□□□ -0.38
CMSS1-208ENST00000496116 ARID5BQ14865 1188 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 FAM47AQ5JRC9 791 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 FAM182BQ5T319 152 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 NT5DC1Q5TFE4 455 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 AMIGO3Q86WK7 504 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 TRIML1Q8N9V2 468 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 SMARCE1Q969G3 411 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 FERMT2Q96AC1 680 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 PAXBP1Q9Y5B6 917 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 SERPINC1P01008 464 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 SFPQP23246 707 aaKnown RBP eCLIP12.67□□□□□ -0.386e-6■■□□□ 12.5
CMSS1-208ENST00000496116 GRIN1Q05586 938 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 NFIXQ14938 502 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 CCDC178Q5BJE1 867 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 CERS3Q8IU89 383 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 FOXP4Q8IVH2 680 aaPredicted RBP12.67□□□□□ -0.38
CMSS1-208ENST00000496116 CSRNP2Q9H175 543 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 KAT14Q9H8E8 782 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 SERTAD1Q9UHV2 236 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 JAG2Q9Y219 1238 aa12.67□□□□□ -0.38
CMSS1-208ENST00000496116 hCG_1642624A0A1W2PR95 340 aa12.66□□□□□ -0.38
CMSS1-208ENST00000496116 RIOK3O14730 519 aaKnown RBP12.66□□□□□ -0.38
CMSS1-208ENST00000496116 NMT2O60551 498 aa12.66□□□□□ -0.38
CMSS1-208ENST00000496116 LDHCP07864 332 aa12.66□□□□□ -0.38
CMSS1-208ENST00000496116 UBASH3AP57075 661 aa12.66□□□□□ -0.38
CMSS1-208ENST00000496116 FAM196AQ6ZSG2 479 aa12.66□□□□□ -0.38
CMSS1-208ENST00000496116 DGKHQ86XP1 1220 aa12.66□□□□□ -0.38
CMSS1-208ENST00000496116 SRBD1Q8N5C6 995 aaKnown RBP12.66□□□□□ -0.38
CMSS1-208ENST00000496116 MLKLQ8NB16 471 aa12.66□□□□□ -0.38
CMSS1-208ENST00000496116 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
CMSS1-208ENST00000496116 GJD4Q96KN9 370 aaPredicted RBP12.66□□□□□ -0.38
CMSS1-208ENST00000496116 KCND1Q9NSA2 647 aa12.66□□□□□ -0.38
CMSS1-208ENST00000496116 SBF2Q86WG5 1849 aa12.66□□□□□ -0.38
CMSS1-208ENST00000496116 CYP2D6P10635 497 aa12.65□□□□□ -0.38
CMSS1-208ENST00000496116 SCG2P13521 617 aa12.65□□□□□ -0.38
CMSS1-208ENST00000496116 C12orf60Q5U649 245 aa12.65□□□□□ -0.38
CMSS1-208ENST00000496116 C15orf52Q6ZUT6 534 aaKnown RBP12.65□□□□□ -0.38
CMSS1-208ENST00000496116 SHISA4Q96DD7 197 aa12.65□□□□□ -0.38
CMSS1-208ENST00000496116 USP17L8P0C7I0 530 aa12.65□□□□□ -0.38
CMSS1-208ENST00000496116 TRAPPC10P48553 1259 aa12.65□□□□□ -0.38
CMSS1-208ENST00000496116 SARSP49591 514 aaKnown RBP12.65□□□□□ -0.38
CMSS1-208ENST00000496116 NLRP5P59047 1200 aa12.65□□□□□ -0.38
CMSS1-208ENST00000496116 PTPN14Q15678 1187 aa12.65□□□□□ -0.38
CMSS1-208ENST00000496116 PFKFB3Q16875 520 aaPredicted RBP12.65□□□□□ -0.38
CMSS1-208ENST00000496116 CFAP100Q494V2 611 aa12.65□□□□□ -0.38
CMSS1-208ENST00000496116 PDILTQ8N807 584 aa12.65□□□□□ -0.38
CMSS1-208ENST00000496116 HSD3B7Q9H2F3 369 aa12.65□□□□□ -0.38
CMSS1-208ENST00000496116 MKNK2Q9HBH9 465 aa12.65□□□□□ -0.38
CMSS1-208ENST00000496116 MKRN1Q9UHC7 482 aaKnown RBP12.65□□□□□ -0.38
CMSS1-208ENST00000496116 MAN1B1Q9UKM7 699 aa12.65□□□□□ -0.38
CMSS1-208ENST00000496116 FOXN1O15353 648 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 ACTN4O43707 911 aaKnown RBP12.64□□□□□ -0.39
CMSS1-208ENST00000496116 ATP1A3P13637 1013 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 CALML3P27482 149 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 ST5P78524 1137 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 TFAP4Q01664 338 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 EVX2Q03828 476 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 TTC38Q5R3I4 469 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 MEX3CQ5U5Q3 659 aaKnown RBP12.64□□□□□ -0.39
CMSS1-208ENST00000496116 CEP135Q66GS9 1140 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 TNFRSF25Q93038 417 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 ZNF287Q9HBT7 754 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 ROBO3Q96MS0 1386 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 FAM205CA6NFA0 338 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 KIF2AO00139 706 aaPredicted RBP12.64□□□□□ -0.39
CMSS1-208ENST00000496116 KCNJ6P48051 423 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 GNAQP50148 359 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 PPP4CP60510 307 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 MORC3Q14149 939 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 EARS2Q5JPH6 523 aaKnown RBP12.64□□□□□ -0.39
CMSS1-208ENST00000496116 CT47A1Q5JQC4 288 aaPredicted RBP12.64□□□□□ -0.39
CMSS1-208ENST00000496116 CCAR2Q8N163 923 aaKnown RBP12.64□□□□□ -0.39
CMSS1-208ENST00000496116 PYM1Q9BRP8 204 aaKnown RBP12.64□□□□□ -0.39
CMSS1-208ENST00000496116 FANCLQ9NW38 375 aa12.64□□□□□ -0.39
CMSS1-208ENST00000496116 TSPY3P0CV98 308 aa12.63□□□□□ -0.39
CMSS1-208ENST00000496116 TSPY8P0CW00 308 aa12.63□□□□□ -0.39
CMSS1-208ENST00000496116 BMP6P22004 513 aa12.63□□□□□ -0.39
CMSS1-208ENST00000496116 NPY5RQ15761 445 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms