RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 NYXQ9GZU5 481 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 CPA4Q9UI42 421 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 PCDHAC2Q9Y5I4 1007 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 ECM29Q5VYK3 1845 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 VPS13AQ96RL7 3174 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 TRANK1O15050 2925 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 TIMP2P16035 220 aa6.21□□□□□ -1.42
XPA-204ENST00000496104 NF2P35240 595 aa6.21□□□□□ -1.42
XPA-204ENST00000496104 UBXN2AP68543 259 aa6.21□□□□□ -1.42
XPA-204ENST00000496104 NNTQ13423 1086 aa6.21□□□□□ -1.42
XPA-204ENST00000496104 ARHGEF6Q15052 776 aa6.21□□□□□ -1.42
XPA-204ENST00000496104 OTUD7BQ6GQQ9 843 aa6.21□□□□□ -1.42
XPA-204ENST00000496104 TTC5Q8N0Z6 440 aa6.21□□□□□ -1.42
XPA-204ENST00000496104 TBC1D16Q8TBP0 767 aa6.21□□□□□ -1.42
XPA-204ENST00000496104 PPM1EQ8WY54 764 aa6.21□□□□□ -1.42
XPA-204ENST00000496104 CELF1Q92879 486 aaKnown RBP6.21□□□□□ -1.42
XPA-204ENST00000496104 C11orf49Q9H6J7 331 aa6.21□□□□□ -1.42
XPA-204ENST00000496104 ELP3Q9H9T3 547 aa6.21□□□□□ -1.42
XPA-204ENST00000496104 FASNP49327 2511 aaKnown RBP6.21□□□□□ -1.42
XPA-204ENST00000496104 ZFHX2Q9C0A1 2572 aaPredicted RBP6.2□□□□□ -1.42
XPA-204ENST00000496104 FRMPD3Q5JV73 1810 aa6.2□□□□□ -1.42
XPA-204ENST00000496104 PI4K2BG5E9Z4 385 aa6.2□□□□□ -1.42
XPA-204ENST00000496104 MSTNO14793 375 aa6.2□□□□□ -1.42
XPA-204ENST00000496104 ARHGEF15O94989 841 aa6.2□□□□□ -1.42
XPA-204ENST00000496104 ERCC3P19447 782 aa6.2□□□□□ -1.42
XPA-204ENST00000496104 IL13P35225 146 aa6.2□□□□□ -1.42
XPA-204ENST00000496104 MARSP56192 900 aaKnown RBP6.2□□□□□ -1.42
XPA-204ENST00000496104 NBPF12Q5TAG4 269 aaPredicted RBP6.2□□□□□ -1.42
XPA-204ENST00000496104 WHAMMQ8TF30 809 aa6.2□□□□□ -1.42
XPA-204ENST00000496104 FMNL2Q96PY5 1086 aa6.2□□□□□ -1.42
XPA-204ENST00000496104 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.2□□□□□ -1.42
XPA-204ENST00000496104 VRTNQ9H8Y1 702 aa6.2□□□□□ -1.42
XPA-204ENST00000496104 CXXC1Q9P0U4 656 aaPredicted RBP6.2□□□□□ -1.42
XPA-204ENST00000496104 MAP3K15Q6ZN16 1313 aa6.2□□□□□ -1.42
XPA-204ENST00000496104 PLXNB2O15031 1838 aa6.2□□□□□ -1.42
XPA-204ENST00000496104 MYO9BQ13459 2157 aa6.2□□□□□ -1.42
XPA-204ENST00000496104 CACNA1HO95180 2353 aa6.2□□□□□ -1.42
XPA-204ENST00000496104 USP24Q9UPU5 2620 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 RBM47A0AV96 593 aaKnown RBP6.19□□□□□ -1.42
XPA-204ENST00000496104 UNCXA6NJT0 531 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 PRR33A8MZF0 331 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 ERVV-1B6SEH8 477 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 PER1O15534 1290 aaPredicted RBP6.19□□□□□ -1.42
XPA-204ENST00000496104 ADCY3O60266 1144 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 BCRP11274 1271 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 EPHB4P54760 987 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 WDR4P57081 412 aaKnown RBP6.19□□□□□ -1.42
XPA-204ENST00000496104 SH3BP2P78314 561 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 MOGSQ13724 837 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 DACT2Q5SW24 774 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 AKNAD1Q5T1N1 836 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 PTCRAQ6ISU1 281 aaPredicted RBP6.19□□□□□ -1.42
XPA-204ENST00000496104 TBC1D9Q6ZT07 1266 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 ANKRD13AQ8IZ07 590 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 Q8N3U1 123 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 ZBTB38Q8NAP3 1195 aaPredicted RBP6.19□□□□□ -1.42
XPA-204ENST00000496104 UBE2Q2Q8WVN8 375 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 CARD11Q9BXL7 1154 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 DEFB129Q9H1M3 183 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 IGSF5Q9NSI5 407 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 BIN2Q9UBW5 565 aaPredicted RBP6.19□□□□□ -1.42
XPA-204ENST00000496104 OGDHLQ9ULD0 1010 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 NSFL1CQ9UNZ2 370 aaKnown RBP6.19□□□□□ -1.42
XPA-204ENST00000496104 MAFBQ9Y5Q3 323 aaPredicted RBP6.19□□□□□ -1.42
XPA-204ENST00000496104 PLXNA3P51805 1871 aa6.19□□□□□ -1.42
XPA-204ENST00000496104 ACACBO00763 2458 aa6.18□□□□□ -1.42
XPA-204ENST00000496104 ADH1CP00326 375 aa6.18□□□□□ -1.42
XPA-204ENST00000496104 HCLS1P14317 486 aaPredicted RBP6.18□□□□□ -1.42
XPA-204ENST00000496104 SOX11P35716 441 aa6.18□□□□□ -1.42
XPA-204ENST00000496104 FLT3LGP49771 235 aa6.18□□□□□ -1.42
XPA-204ENST00000496104 COL9A2Q14055 689 aaPredicted RBP6.18□□□□□ -1.42
XPA-204ENST00000496104 LRP10Q7Z4F1 713 aa6.18□□□□□ -1.42
XPA-204ENST00000496104 APOBEC3FQ8IUX4 373 aaKnown RBP6.18□□□□□ -1.42
XPA-204ENST00000496104 SCARF2Q96GP6 870 aaPredicted RBP6.18□□□□□ -1.42
XPA-204ENST00000496104 DRC1Q96MC2 740 aa6.18□□□□□ -1.42
XPA-204ENST00000496104 NLRP3Q96P20 1036 aa6.18□□□□□ -1.42
XPA-204ENST00000496104 ALG13Q9NP73 1137 aaKnown RBP6.18□□□□□ -1.42
XPA-204ENST00000496104 ARAP2Q8WZ64 1704 aa6.18□□□□□ -1.42
XPA-204ENST00000496104 GPR179Q6PRD1 2367 aa6.18□□□□□ -1.42
XPA-204ENST00000496104 GVINP1Q7Z2Y8 2422 aa6.17□□□□□ -1.42
XPA-204ENST00000496104 MAP1BP46821 2468 aaKnown RBP6.17□□□□□ -1.42
XPA-204ENST00000496104 C6orf229H3BNL8 230 aa6.17□□□□□ -1.42
XPA-204ENST00000496104 VGLL4Q14135 290 aa6.17□□□□□ -1.42
XPA-204ENST00000496104 KIF22Q14807 665 aa6.17□□□□□ -1.42
XPA-204ENST00000496104 NR6A1Q15406 480 aa6.17□□□□□ -1.42
XPA-204ENST00000496104 CCDC85BQ15834 202 aaPredicted RBP6.17□□□□□ -1.42
XPA-204ENST00000496104 PLA2G4EQ3MJ16 856 aa6.17□□□□□ -1.42
XPA-204ENST00000496104 CDCA8Q53HL2 280 aa6.17□□□□□ -1.42
XPA-204ENST00000496104 C6orf118Q5T5N4 469 aa6.17□□□□□ -1.42
XPA-204ENST00000496104 PRSS33Q8NF86 280 aa6.17□□□□□ -1.42
XPA-204ENST00000496104 SPOCK3Q9BQ16 436 aa6.17□□□□□ -1.42
XPA-204ENST00000496104 PRDM12Q9H4Q4 367 aa6.17□□□□□ -1.42
XPA-204ENST00000496104 ZCCHC17Q9NP64 241 aaKnown RBP6.17□□□□□ -1.42
XPA-204ENST00000496104 RALYQ9UKM9 306 aaKnown RBP6.17□□□□□ -1.42
XPA-204ENST00000496104 SNCAIPQ9Y6H5 919 aa6.17□□□□□ -1.42
XPA-204ENST00000496104 IVNS1ABPQ9Y6Y0 642 aa6.17□□□□□ -1.42
XPA-204ENST00000496104 BRWD1Q9NSI6 2320 aa6.17□□□□□ -1.42
XPA-204ENST00000496104 ZNF804BA4D1E1 1349 aa6.17□□□□□ -1.42
XPA-204ENST00000496104 PTPRZ1P23471 2315 aaPredicted RBP6.16□□□□□ -1.42
XPA-204ENST00000496104 MED19A0JLT2 244 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms