RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 GORABQ5T7V8 394 aa16.53■□□□□ 0.24
COL1A1-209ENST00000495677 CATSPERGQ6ZRH7 1159 aa16.53■□□□□ 0.24
COL1A1-209ENST00000495677 TRMT2AQ8IZ69 625 aaKnown RBP16.53■□□□□ 0.24
COL1A1-209ENST00000495677 CRACR2BQ8N4Y2 399 aaPredicted RBP16.53■□□□□ 0.24
COL1A1-209ENST00000495677 AATFQ9NY61 560 aaKnown RBP eCLIP16.53■□□□□ 0.24
COL1A1-209ENST00000495677 NOB1Q9ULX3 412 aaKnown RBP16.53■□□□□ 0.24
COL1A1-209ENST00000495677 GDF11O95390 407 aa16.52■□□□□ 0.24
COL1A1-209ENST00000495677 RTP1P59025 263 aa16.52■□□□□ 0.24
COL1A1-209ENST00000495677 ATP2B2Q01814 1243 aa16.52■□□□□ 0.24
COL1A1-209ENST00000495677 GRB14Q14449 540 aa16.52■□□□□ 0.24
COL1A1-209ENST00000495677 SHHQ15465 462 aa16.52■□□□□ 0.24
COL1A1-209ENST00000495677 C1orf53Q5VUE5 145 aa16.52■□□□□ 0.24
COL1A1-209ENST00000495677 NAA16Q6N069 864 aaPredicted RBP16.52■□□□□ 0.24
COL1A1-209ENST00000495677 TATDN1Q6P1N9 297 aa16.52■□□□□ 0.24
COL1A1-209ENST00000495677 ATF7IPQ6VMQ6 1270 aa16.52■□□□□ 0.24
COL1A1-209ENST00000495677 SLC39A5Q6ZMH5 540 aa16.52■□□□□ 0.24
COL1A1-209ENST00000495677 ARRDC4Q8NCT1 418 aa16.52■□□□□ 0.24
COL1A1-209ENST00000495677 MAFAQ8NHW3 353 aaPredicted RBP16.52■□□□□ 0.24
COL1A1-209ENST00000495677 SYMPKQ92797 1274 aaKnown RBP16.52■□□□□ 0.24
COL1A1-209ENST00000495677 PALD1Q9ULE6 856 aa16.52■□□□□ 0.24
COL1A1-209ENST00000495677 CDH23Q9H251 3354 aa16.52■□□□□ 0.23
COL1A1-209ENST00000495677 MYO9BQ13459 2157 aa16.51■□□□□ 0.23
COL1A1-209ENST00000495677 HLA-DOAP06340 250 aa16.51■□□□□ 0.23
COL1A1-209ENST00000495677 ATN1P54259 1190 aaPredicted RBP16.51■□□□□ 0.23
COL1A1-209ENST00000495677 USP14P54578 494 aa16.51■□□□□ 0.23
COL1A1-209ENST00000495677 SNX17Q15036 470 aa16.51■□□□□ 0.23
COL1A1-209ENST00000495677 SHROOM1Q2M3G4 852 aaPredicted RBP16.51■□□□□ 0.23
COL1A1-209ENST00000495677 MAPKAPK5Q8IW41 473 aa16.51■□□□□ 0.23
COL1A1-209ENST00000495677 NPLOC4Q8TAT6 608 aa16.51■□□□□ 0.23
COL1A1-209ENST00000495677 ARHGAP45Q92619 1136 aa16.51■□□□□ 0.23
COL1A1-209ENST00000495677 TRIM34Q9BYJ4 488 aa16.51■□□□□ 0.23
COL1A1-209ENST00000495677 CWC22Q9HCG8 908 aaKnown RBP16.51■□□□□ 0.23
COL1A1-209ENST00000495677 TMEM265A0A087WTH1 108 aa16.5■□□□□ 0.23
COL1A1-209ENST00000495677 STRNO43815 780 aa16.5■□□□□ 0.23
COL1A1-209ENST00000495677 CYBAP13498 195 aa16.5■□□□□ 0.23
COL1A1-209ENST00000495677 CNGA1P29973 690 aa16.5■□□□□ 0.23
COL1A1-209ENST00000495677 OLFML2BQ68BL8 750 aa16.5■□□□□ 0.23
COL1A1-209ENST00000495677 KIAA1683Q9H0B3 1180 aa16.5■□□□□ 0.23
COL1A1-209ENST00000495677 GPR108Q9NPR9 543 aa16.5■□□□□ 0.23
COL1A1-209ENST00000495677 IVNS1ABPQ9Y6Y0 642 aa16.5■□□□□ 0.23
COL1A1-209ENST00000495677 GH2P01242 217 aa16.49■□□□□ 0.23
COL1A1-209ENST00000495677 C9orf50Q5SZB4 431 aa16.49■□□□□ 0.23
COL1A1-209ENST00000495677 ADGRA1Q86SQ6 560 aa16.49■□□□□ 0.23
COL1A1-209ENST00000495677 CERS3Q8IU89 383 aa16.49■□□□□ 0.23
COL1A1-209ENST00000495677 TRPV1Q8NER1 839 aa16.49■□□□□ 0.23
COL1A1-209ENST00000495677 ZNF512BQ96KM6 892 aaPredicted RBP16.49■□□□□ 0.23
COL1A1-209ENST00000495677 TTYH1Q9H313 450 aaPredicted RBP16.49■□□□□ 0.23
COL1A1-209ENST00000495677 BTBD7Q9P203 1132 aa16.49■□□□□ 0.23
COL1A1-209ENST00000495677 PARP14Q460N5 1801 aa16.49■□□□□ 0.23
COL1A1-209ENST00000495677 PLXNA1Q9UIW2 1896 aa16.48■□□□□ 0.23
COL1A1-209ENST00000495677 CYP2C19P33261 490 aa16.48■□□□□ 0.23
COL1A1-209ENST00000495677 G3BP1Q13283 466 aaKnown RBP eCLIP16.48■□□□□ 0.23
COL1A1-209ENST00000495677 EHD4Q9H223 541 aa16.48■□□□□ 0.23
COL1A1-209ENST00000495677 MYH8P13535 1937 aa16.47■□□□□ 0.23
COL1A1-209ENST00000495677 SEPT4O43236 478 aa16.47■□□□□ 0.23
COL1A1-209ENST00000495677 CYP2E1P05181 493 aaPredicted RBP16.47■□□□□ 0.23
COL1A1-209ENST00000495677 VCAM1P19320 739 aa16.47■□□□□ 0.23
COL1A1-209ENST00000495677 GJC2Q5T442 439 aaPredicted RBP16.47■□□□□ 0.23
COL1A1-209ENST00000495677 MYLIPQ8WY64 445 aa16.47■□□□□ 0.23
COL1A1-209ENST00000495677 BADQ92934 168 aa16.47■□□□□ 0.23
COL1A1-209ENST00000495677 ATP11BQ9Y2G3 1177 aa16.47■□□□□ 0.23
COL1A1-209ENST00000495677 NDUFB9Q9Y6M9 179 aa16.47■□□□□ 0.23
COL1A1-209ENST00000495677 A0A0G2JMZ2 1700 aa16.47■□□□□ 0.23
COL1A1-209ENST00000495677 SPDYE16A6NNV3 312 aaPredicted RBP16.46■□□□□ 0.23
COL1A1-209ENST00000495677 KBTBD13C9JR72 458 aa16.46■□□□□ 0.23
COL1A1-209ENST00000495677 CCDC158Q5M9N0 1113 aa16.46■□□□□ 0.23
COL1A1-209ENST00000495677 WDR78Q5VTH9 848 aa16.46■□□□□ 0.23
COL1A1-209ENST00000495677 DPP9Q86TI2 863 aa16.46■□□□□ 0.23
COL1A1-209ENST00000495677 FEZ1Q99689 392 aa16.46■□□□□ 0.23
COL1A1-209ENST00000495677 HOXC10Q9NYD6 342 aa16.46■□□□□ 0.23
COL1A1-209ENST00000495677 SERPINB13Q9UIV8 391 aa16.46■□□□□ 0.23
COL1A1-209ENST00000495677 TTC28Q96AY4 2481 aa16.46■□□□□ 0.23
COL1A1-209ENST00000495677 MUC3AQ02505 3323 aa16.46■□□□□ 0.23
COL1A1-209ENST00000495677 COL11A1P12107 1806 aaPredicted RBP16.45■□□□□ 0.22
COL1A1-209ENST00000495677 TMED8Q6PL24 325 aaPredicted RBP16.45■□□□□ 0.22
COL1A1-209ENST00000495677 TTC6Q86TZ1 520 aa16.45■□□□□ 0.22
COL1A1-209ENST00000495677 SHCBP1Q8NEM2 672 aa16.45■□□□□ 0.22
COL1A1-209ENST00000495677 CDCA7LQ96GN5 454 aa16.45■□□□□ 0.22
COL1A1-209ENST00000495677 PDLIM7Q9NR12 457 aa16.45■□□□□ 0.22
COL1A1-209ENST00000495677 TACC3Q9Y6A5 838 aa16.45■□□□□ 0.22
COL1A1-209ENST00000495677 PNMA6EA0A0J9YXQ4 647 aa16.44■□□□□ 0.22
COL1A1-209ENST00000495677 TRIM43BA6NCK2 446 aa16.44■□□□□ 0.22
COL1A1-209ENST00000495677 COG2Q14746 738 aa16.44■□□□□ 0.22
COL1A1-209ENST00000495677 ZYXQ15942 572 aaKnown RBP16.44■□□□□ 0.22
COL1A1-209ENST00000495677 TRIM60Q495X7 471 aa16.44■□□□□ 0.22
COL1A1-209ENST00000495677 CERKLQ49MI3 558 aaPredicted RBP16.44■□□□□ 0.22
COL1A1-209ENST00000495677 TTC39AQ5SRH9 613 aa16.44■□□□□ 0.22
COL1A1-209ENST00000495677 ABRAQ8N0Z2 381 aa16.44■□□□□ 0.22
COL1A1-209ENST00000495677 TRIM43Q96BQ3 446 aaPredicted RBP16.44■□□□□ 0.22
COL1A1-209ENST00000495677 CABP5Q9NP86 173 aa16.44■□□□□ 0.22
COL1A1-209ENST00000495677 SNRKQ9NRH2 765 aa16.44■□□□□ 0.22
COL1A1-209ENST00000495677 SLC5A4Q9NY91 659 aa16.44■□□□□ 0.22
COL1A1-209ENST00000495677 SAP30BPQ9UHR5 308 aaKnown RBP16.44■□□□□ 0.22
COL1A1-209ENST00000495677 GNAI2P04899 355 aa16.43■□□□□ 0.22
COL1A1-209ENST00000495677 FOSL2P15408 326 aa16.43■□□□□ 0.22
COL1A1-209ENST00000495677 ADORA2AP29274 412 aa16.43■□□□□ 0.22
COL1A1-209ENST00000495677 DYNLL1P63167 89 aaKnown RBP16.43■□□□□ 0.22
COL1A1-209ENST00000495677 RAB3GAP1Q15042 981 aa16.43■□□□□ 0.22
COL1A1-209ENST00000495677 LRRC41Q15345 812 aa16.43■□□□□ 0.22
COL1A1-209ENST00000495677 ABCB5Q2M3G0 1257 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms