RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 BICD2Q8TD16 824 aa18.11■□□□□ 0.49
SHISA5-216ENST00000494854 FUCA2Q9BTY2 467 aa18.11■□□□□ 0.49
SHISA5-216ENST00000494854 MYL10Q9BUA6 226 aa18.11■□□□□ 0.49
SHISA5-216ENST00000494854 NUP62CLQ9H1M0 184 aa18.11■□□□□ 0.49
SHISA5-216ENST00000494854 ERICH2A1L162 156 aa18.11■□□□□ 0.49
SHISA5-216ENST00000494854 NTRK3Q16288 839 aa18.11■□□□□ 0.49
SHISA5-216ENST00000494854 DLK2Q6UY11 383 aa18.11■□□□□ 0.49
SHISA5-216ENST00000494854 SYNE3Q6ZMZ3 975 aa18.11■□□□□ 0.49
SHISA5-216ENST00000494854 ZKSCAN3Q9BRR0 538 aa18.11■□□□□ 0.49
SHISA5-216ENST00000494854 FTOQ9C0B1 505 aaKnown RBP eCLIP18.11■□□□□ 0.49
SHISA5-216ENST00000494854 ZNF408Q9H9D4 720 aa18.11■□□□□ 0.49
SHISA5-216ENST00000494854 FAM217BQ9NTX9 383 aaPredicted RBP18.11■□□□□ 0.49
SHISA5-216ENST00000494854 DDX19AQ9NUU7 478 aaKnown RBP18.11■□□□□ 0.49
SHISA5-216ENST00000494854 DACT1Q9NYF0 836 aa18.11■□□□□ 0.49
SHISA5-216ENST00000494854 PDLIM2Q96JY6 352 aa18.1■□□□□ 0.49
SHISA5-216ENST00000494854 SPTY2D1Q68D10 685 aaPredicted RBP18.1■□□□□ 0.49
SHISA5-216ENST00000494854 BRAPQ7Z569 592 aa18.1■□□□□ 0.49
SHISA5-216ENST00000494854 TMTC2Q8N394 836 aa18.1■□□□□ 0.49
SHISA5-216ENST00000494854 ESR2Q92731 530 aa18.1■□□□□ 0.49
SHISA5-216ENST00000494854 PHKBQ93100 1093 aa18.1■□□□□ 0.49
SHISA5-216ENST00000494854 CDCA5Q96FF9 252 aa18.1■□□□□ 0.49
SHISA5-216ENST00000494854 CAPNS2Q96L46 248 aa18.1■□□□□ 0.49
SHISA5-216ENST00000494854 ALG1Q9BT22 464 aa18.1■□□□□ 0.49
SHISA5-216ENST00000494854 GJB4Q9NTQ9 266 aa18.1■□□□□ 0.49
SHISA5-216ENST00000494854 AATFQ9NY61 560 aaKnown RBP eCLIP18.1■□□□□ 0.49
SHISA5-216ENST00000494854 HSPA1AP0DMV8 641 aaKnown RBP18.09■□□□□ 0.49
SHISA5-216ENST00000494854 HSPA1BP0DMV9 641 aaKnown RBP18.09■□□□□ 0.49
SHISA5-216ENST00000494854 DLGAP5Q15398 846 aa18.09■□□□□ 0.49
SHISA5-216ENST00000494854 MAP3K11Q16584 847 aa18.09■□□□□ 0.49
SHISA5-216ENST00000494854 MFSD14BQ5SR56 506 aa18.09■□□□□ 0.49
SHISA5-216ENST00000494854 C2orf69Q8N8R5 385 aa18.09■□□□□ 0.49
SHISA5-216ENST00000494854 CRNKL1Q9BZJ0 848 aaKnown RBP18.09■□□□□ 0.49
SHISA5-216ENST00000494854 GBA2Q9HCG7 927 aaPredicted RBP18.09■□□□□ 0.49
SHISA5-216ENST00000494854 JAG2Q9Y219 1238 aa18.09■□□□□ 0.49
SHISA5-216ENST00000494854 MYH6P13533 1939 aa18.09■□□□□ 0.49
SHISA5-216ENST00000494854 SMIM22K7EJ46 135 aa18.08■□□□□ 0.49
SHISA5-216ENST00000494854 NR1I2O75469 434 aa18.08■□□□□ 0.49
SHISA5-216ENST00000494854 UVSSAQ2YD98 709 aa18.08■□□□□ 0.49
SHISA5-216ENST00000494854 CTR9Q6PD62 1173 aa18.08■□□□□ 0.49
SHISA5-216ENST00000494854 DZIP1Q86YF9 867 aaKnown RBP18.08■□□□□ 0.49
SHISA5-216ENST00000494854 WDR66Q8TBY9 1149 aa18.08■□□□□ 0.49
SHISA5-216ENST00000494854 TBC1D22AQ8WUA7 517 aa18.08■□□□□ 0.49
SHISA5-216ENST00000494854 UBAC1Q9BSL1 405 aa18.08■□□□□ 0.49
SHISA5-216ENST00000494854 STK36Q9NRP7 1315 aa18.08■□□□□ 0.49
SHISA5-216ENST00000494854 CYP2D7A0A087X1C5 515 aa18.08■□□□□ 0.48
SHISA5-216ENST00000494854 RANBP6O60518 1105 aaKnown RBP18.08■□□□□ 0.48
SHISA5-216ENST00000494854 IGSF3O75054 1194 aa18.08■□□□□ 0.48
SHISA5-216ENST00000494854 PCP11498 1178 aaKnown RBP18.08■□□□□ 0.48
SHISA5-216ENST00000494854 KIF23Q02241 960 aaPredicted RBP18.08■□□□□ 0.48
SHISA5-216ENST00000494854 CAMK4Q16566 473 aa18.08■□□□□ 0.48
SHISA5-216ENST00000494854 APOBEC3FQ8IUX4 373 aaKnown RBP18.08■□□□□ 0.48
SHISA5-216ENST00000494854 AIFM3Q96NN9 605 aa18.08■□□□□ 0.48
SHISA5-216ENST00000494854 TNMDQ9H2S6 317 aa18.08■□□□□ 0.48
SHISA5-216ENST00000494854 CLSTN2Q9H4D0 955 aa18.08■□□□□ 0.48
SHISA5-216ENST00000494854 RRAGDQ9NQL2 400 aaPredicted RBP18.08■□□□□ 0.48
SHISA5-216ENST00000494854 RTEL1Q9NZ71 1219 aa18.08■□□□□ 0.48
SHISA5-216ENST00000494854 THSD7BQ9C0I4 1608 aa18.07■□□□□ 0.48
SHISA5-216ENST00000494854 POLR3DP05423 398 aaPredicted RBP18.07■□□□□ 0.48
SHISA5-216ENST00000494854 CCDC192P0DO97 292 aa18.07■□□□□ 0.48
SHISA5-216ENST00000494854 MAP2K2P36507 400 aa18.07■□□□□ 0.48
SHISA5-216ENST00000494854 RCAN1P53805 252 aa18.07■□□□□ 0.48
SHISA5-216ENST00000494854 FKBP1BP68106 108 aa18.07■□□□□ 0.48
SHISA5-216ENST00000494854 CYP4F22Q6NT55 531 aa18.07■□□□□ 0.48
SHISA5-216ENST00000494854 ATP8A2Q9NTI2 1148 aa18.07■□□□□ 0.48
SHISA5-216ENST00000494854 WBP1LQ9NX94 342 aa18.07■□□□□ 0.48
SHISA5-216ENST00000494854 TNKSO95271 1327 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 KIF28PB7ZC32 967 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 USP17L12C9JPN9 530 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 USP17L21D6R901 530 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 FGRP09769 529 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 IFNAR1P17181 557 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 HUNKP57058 714 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 MAP2K1Q02750 393 aaPredicted RBP18.06■□□□□ 0.48
SHISA5-216ENST00000494854 SSRP1Q08945 709 aaKnown RBP18.06■□□□□ 0.48
SHISA5-216ENST00000494854 SEC23AQ15436 765 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 RTN1Q16799 776 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 CFAP100Q494V2 611 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 MYSM1Q5VVJ2 828 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 DCP1AQ9NPI6 582 aaPredicted RBP18.06■□□□□ 0.48
SHISA5-216ENST00000494854 SERPINA10Q9UK55 444 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 SPDYE2BA6NHP3 402 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 F8W031 263 aaPredicted RBP18.06■□□□□ 0.48
SHISA5-216ENST00000494854 FMNL1O95466 1100 aaPredicted RBP18.06■□□□□ 0.48
SHISA5-216ENST00000494854 LDHBP07195 334 aaKnown RBP18.06■□□□□ 0.48
SHISA5-216ENST00000494854 SPDYE6P0CI01 402 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 KRT40Q6A162 431 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 RBM43Q6ZSC3 357 aaKnown RBP18.06■□□□□ 0.48
SHISA5-216ENST00000494854 PAXIP1Q6ZW49 1069 aaPredicted RBP18.06■□□□□ 0.48
SHISA5-216ENST00000494854 CCAR1Q8IX12 1150 aaKnown RBP18.06■□□□□ 0.48
SHISA5-216ENST00000494854 ZNF654Q8IZM8 581 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 SLC26A6Q9BXS9 759 aa18.06■□□□□ 0.48
SHISA5-216ENST00000494854 HDLBPQ00341 1268 aaKnown RBP18.05■□□□□ 0.48
SHISA5-216ENST00000494854 PRMT6Q96LA8 375 aaPredicted RBP18.05■□□□□ 0.48
SHISA5-216ENST00000494854 MRIQ9BWK5 157 aa18.05■□□□□ 0.48
SHISA5-216ENST00000494854 POLR3EQ9NVU0 708 aa18.05■□□□□ 0.48
SHISA5-216ENST00000494854 TTF2Q9UNY4 1162 aaKnown RBP18.05■□□□□ 0.48
SHISA5-216ENST00000494854 SUGT1Q9Y2Z0 365 aa18.05■□□□□ 0.48
SHISA5-216ENST00000494854 CCDC196A0A1B0GTZ2 297 aa18.04■□□□□ 0.48
SHISA5-216ENST00000494854 MYO1BO43795 1136 aa18.04■□□□□ 0.48
SHISA5-216ENST00000494854 YEATS4O95619 227 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms