RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 LRIT3Q3SXY7 679 aa17.82■□□□□ 0.44
PCCB-219ENST00000494742 POTEEQ6S8J3 1075 aa17.82■□□□□ 0.44
PCCB-219ENST00000494742 LBX2Q6XYB7 198 aa17.82■□□□□ 0.44
PCCB-219ENST00000494742 FTSJ3Q8IY81 847 aaKnown RBP17.82■□□□□ 0.44
PCCB-219ENST00000494742 LRCH3Q96II8 777 aa17.82■□□□□ 0.44
PCCB-219ENST00000494742 FEZ1Q99689 392 aa17.82■□□□□ 0.44
PCCB-219ENST00000494742 CCDC8Q9H0W5 538 aaPredicted RBP17.82■□□□□ 0.44
PCCB-219ENST00000494742 CWC22Q9HCG8 908 aaKnown RBP17.82■□□□□ 0.44
PCCB-219ENST00000494742 ZMYND8Q9ULU4 1186 aaPredicted RBP17.82■□□□□ 0.44
PCCB-219ENST00000494742 LAMA3Q16787 3333 aa17.82■□□□□ 0.44
PCCB-219ENST00000494742 PFASO15067 1338 aa17.81■□□□□ 0.44
PCCB-219ENST00000494742 CERKLQ49MI3 558 aaPredicted RBP17.81■□□□□ 0.44
PCCB-219ENST00000494742 LHX8Q68G74 356 aa17.81■□□□□ 0.44
PCCB-219ENST00000494742 CATSPERGQ6ZRH7 1159 aa17.81■□□□□ 0.44
PCCB-219ENST00000494742 ERC1Q8IUD2 1116 aa17.81■□□□□ 0.44
PCCB-219ENST00000494742 MAGEB6Q8N7X4 407 aa17.81■□□□□ 0.44
PCCB-219ENST00000494742 MIGA1Q8NAN2 632 aa17.81■□□□□ 0.44
PCCB-219ENST00000494742 TLR7Q9NYK1 1049 aaKnown RBP17.81■□□□□ 0.44
PCCB-219ENST00000494742 FRMPD3Q5JV73 1810 aa17.8■□□□□ 0.44
PCCB-219ENST00000494742 SLC15A5A6NIM6 579 aa17.8■□□□□ 0.44
PCCB-219ENST00000494742 MAGEA10P43363 369 aaPredicted RBP17.8■□□□□ 0.44
PCCB-219ENST00000494742 CCL14Q16627 93 aa17.8■□□□□ 0.44
PCCB-219ENST00000494742 ABCB5Q2M3G0 1257 aa17.8■□□□□ 0.44
PCCB-219ENST00000494742 TDHQ8IZJ6 230 aa17.8■□□□□ 0.44
PCCB-219ENST00000494742 SLC17A8Q8NDX2 589 aa17.8■□□□□ 0.44
PCCB-219ENST00000494742 EDC3Q96F86 508 aaKnown RBP17.8■□□□□ 0.44
PCCB-219ENST00000494742 C1orf115Q9H7X2 142 aa17.8■□□□□ 0.44
PCCB-219ENST00000494742 CABP5Q9NP86 173 aa17.8■□□□□ 0.44
PCCB-219ENST00000494742 CNMDO75829 334 aa17.79■□□□□ 0.44
PCCB-219ENST00000494742 HOXC6P09630 235 aa17.79■□□□□ 0.44
PCCB-219ENST00000494742 SYN1P17600 705 aa17.79■□□□□ 0.44
PCCB-219ENST00000494742 VCAM1P19320 739 aa17.79■□□□□ 0.44
PCCB-219ENST00000494742 CCND3P30281 292 aaPredicted RBP17.79■□□□□ 0.44
PCCB-219ENST00000494742 RAB3GAP1Q15042 981 aa17.79■□□□□ 0.44
PCCB-219ENST00000494742 MFSD14CQ5VZR4 134 aa17.79■□□□□ 0.44
PCCB-219ENST00000494742 ITPRIPQ8IWB1 547 aa17.79■□□□□ 0.44
PCCB-219ENST00000494742 MSCO60682 206 aa17.78■□□□□ 0.44
PCCB-219ENST00000494742 PTPREP23469 700 aa17.78■□□□□ 0.44
PCCB-219ENST00000494742 TTF1Q15361 905 aaPredicted RBP17.78■□□□□ 0.44
PCCB-219ENST00000494742 ZYXQ15942 572 aaKnown RBP17.78■□□□□ 0.44
PCCB-219ENST00000494742 RIOK1Q9BRS2 568 aaKnown RBP17.78■□□□□ 0.44
PCCB-219ENST00000494742 SHMT1P34896 483 aa17.77■□□□□ 0.44
PCCB-219ENST00000494742 HSP90AB4PQ58FF6 505 aa17.77■□□□□ 0.44
PCCB-219ENST00000494742 CEP85Q6P2H3 762 aa17.77■□□□□ 0.44
PCCB-219ENST00000494742 UBE2OQ9C0C9 1292 aaKnown RBP17.77■□□□□ 0.44
PCCB-219ENST00000494742 ANTXR1Q9H6X2 564 aa17.77■□□□□ 0.44
PCCB-219ENST00000494742 IVNS1ABPQ9Y6Y0 642 aa17.77■□□□□ 0.44
PCCB-219ENST00000494742 NAV1Q8NEY1 1877 aa17.76■□□□□ 0.43
PCCB-219ENST00000494742 PLCD1P51178 756 aa17.76■□□□□ 0.43
PCCB-219ENST00000494742 GABPAQ06546 454 aa17.76■□□□□ 0.43
PCCB-219ENST00000494742 GRB14Q14449 540 aa17.76■□□□□ 0.43
PCCB-219ENST00000494742 AACSQ86V21 672 aa17.76■□□□□ 0.43
PCCB-219ENST00000494742 DEFB123Q8N688 67 aa17.76■□□□□ 0.43
PCCB-219ENST00000494742 ACER1Q8TDN7 264 aa17.76■□□□□ 0.43
PCCB-219ENST00000494742 ZNF236Q9UL36 1845 aa17.76■□□□□ 0.43
PCCB-219ENST00000494742 MAGEB6P1A0A0J9YX57 407 aa17.75■□□□□ 0.43
PCCB-219ENST00000494742 SPDYE16A6NNV3 312 aaPredicted RBP17.75■□□□□ 0.43
PCCB-219ENST00000494742 POLR3DP05423 398 aaPredicted RBP17.75■□□□□ 0.43
PCCB-219ENST00000494742 RLBP1P12271 317 aa17.75■□□□□ 0.43
PCCB-219ENST00000494742 ATP2B2Q01814 1243 aa17.75■□□□□ 0.43
PCCB-219ENST00000494742 LRRC26Q2I0M4 334 aa17.75■□□□□ 0.43
PCCB-219ENST00000494742 LPAR1Q92633 364 aa17.75■□□□□ 0.43
PCCB-219ENST00000494742 CRNKL1Q9BZJ0 848 aaKnown RBP17.75■□□□□ 0.43
PCCB-219ENST00000494742 RPAP3Q9H6T3 665 aaPredicted RBP17.75■□□□□ 0.43
PCCB-219ENST00000494742 HOXC10Q9NYD6 342 aa17.75■□□□□ 0.43
PCCB-219ENST00000494742 BTBD7Q9P203 1132 aa17.75■□□□□ 0.43
PCCB-219ENST00000494742 DDX20Q9UHI6 824 aaKnown RBP17.75■□□□□ 0.43
PCCB-219ENST00000494742 DLL1O00548 723 aa17.74■□□□□ 0.43
PCCB-219ENST00000494742 STRNO43815 780 aa17.74■□□□□ 0.43
PCCB-219ENST00000494742 IGHA2P01877 340 aa17.74■□□□□ 0.43
PCCB-219ENST00000494742 GUCY1A2P33402 732 aa17.74■□□□□ 0.43
PCCB-219ENST00000494742 COG2Q14746 738 aa17.74■□□□□ 0.43
PCCB-219ENST00000494742 WDR78Q5VTH9 848 aa17.74■□□□□ 0.43
PCCB-219ENST00000494742 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.74■□□□□ 0.43
PCCB-219ENST00000494742 FLRT1Q9NZU1 646 aa17.74■□□□□ 0.43
PCCB-219ENST00000494742 NDUFB9Q9Y6M9 179 aa17.74■□□□□ 0.43
PCCB-219ENST00000494742 COL6A3P12111 3177 aa17.74■□□□□ 0.43
PCCB-219ENST00000494742 DNM1LO00429 736 aa17.73■□□□□ 0.43
PCCB-219ENST00000494742 SLC9C2Q5TAH2 1124 aa17.73■□□□□ 0.43
PCCB-219ENST00000494742 EXOC6BQ9Y2D4 811 aa17.73■□□□□ 0.43
PCCB-219ENST00000494742 STXBP5LQ9Y2K9 1186 aa17.73■□□□□ 0.43
PCCB-219ENST00000494742 A0A0G2JMZ2 1700 aa17.72■□□□□ 0.43
PCCB-219ENST00000494742 PDE6AP16499 860 aa17.72■□□□□ 0.43
PCCB-219ENST00000494742 SEPT2Q15019 361 aa17.72■□□□□ 0.43
PCCB-219ENST00000494742 OLFML2BQ68BL8 750 aa17.72■□□□□ 0.43
PCCB-219ENST00000494742 MB21D1Q8N884 522 aa17.72■□□□□ 0.43
PCCB-219ENST00000494742 SHCBP1Q8NEM2 672 aa17.72■□□□□ 0.43
PCCB-219ENST00000494742 RHPN1Q8TCX5 695 aa17.72■□□□□ 0.43
PCCB-219ENST00000494742 SENP6Q9GZR1 1112 aaPredicted RBP17.72■□□□□ 0.43
PCCB-219ENST00000494742 MCM9Q9NXL9 1143 aa17.72■□□□□ 0.43
PCCB-219ENST00000494742 SWAP70Q9UH65 585 aa17.72■□□□□ 0.43
PCCB-219ENST00000494742 RLFQ13129 1914 aa17.71■□□□□ 0.43
PCCB-219ENST00000494742 CNGA1P29973 690 aa17.71■□□□□ 0.43
PCCB-219ENST00000494742 TMEM179Q6ZVK1 233 aa17.71■□□□□ 0.43
PCCB-219ENST00000494742 DPP9Q86TI2 863 aa17.71■□□□□ 0.43
PCCB-219ENST00000494742 CLASRPQ8N2M8 674 aaKnown RBP17.71■□□□□ 0.43
PCCB-219ENST00000494742 NPLOC4Q8TAT6 608 aa17.71■□□□□ 0.43
PCCB-219ENST00000494742 MTMR10Q9NXD2 777 aa17.71■□□□□ 0.43
PCCB-219ENST00000494742 MYH8P13535 1937 aa17.7■□□□□ 0.42
PCCB-219ENST00000494742 A0A1W2PRG0 241 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms