RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 CWC22Q9HCG8 908 aaKnown RBP15.39■□□□□ 0.05
SKA1-205ENST00000494518 ZKSCAN1P17029 563 aaPredicted RBP15.38■□□□□ 0.05
SKA1-205ENST00000494518 MNX1P50219 401 aaPredicted RBP15.38■□□□□ 0.05
SKA1-205ENST00000494518 PLCD1P51178 756 aa15.38■□□□□ 0.05
SKA1-205ENST00000494518 WDR78Q5VTH9 848 aa15.38■□□□□ 0.05
SKA1-205ENST00000494518 GPR142Q7Z601 462 aa15.38■□□□□ 0.05
SKA1-205ENST00000494518 GINM1Q9NU53 330 aa15.38■□□□□ 0.05
SKA1-205ENST00000494518 SERPINB13Q9UIV8 391 aa15.38■□□□□ 0.05
SKA1-205ENST00000494518 MYH7P12883 1935 aa15.38■□□□□ 0.05
SKA1-205ENST00000494518 SOX1O00570 391 aaPredicted RBP15.37■□□□□ 0.05
SKA1-205ENST00000494518 SYN1P17600 705 aa15.37■□□□□ 0.05
SKA1-205ENST00000494518 CCND3P30281 292 aaPredicted RBP15.37■□□□□ 0.05
SKA1-205ENST00000494518 MAPK4P31152 587 aa15.37■□□□□ 0.05
SKA1-205ENST00000494518 ABCB5Q2M3G0 1257 aa15.37■□□□□ 0.05
SKA1-205ENST00000494518 CERKLQ49MI3 558 aaPredicted RBP15.37■□□□□ 0.05
SKA1-205ENST00000494518 TATDN1Q6P1N9 297 aa15.37■□□□□ 0.05
SKA1-205ENST00000494518 PLEKHH3Q7Z736 793 aa15.37■□□□□ 0.05
SKA1-205ENST00000494518 SOCS4Q8WXH5 440 aa15.37■□□□□ 0.05
SKA1-205ENST00000494518 DNAJC2Q99543 621 aaKnown RBP15.37■□□□□ 0.05
SKA1-205ENST00000494518 NBPF3Q9H094 633 aa15.37■□□□□ 0.05
SKA1-205ENST00000494518 MAGEB6P1A0A0J9YX57 407 aa15.36■□□□□ 0.05
SKA1-205ENST00000494518 CNMDO75829 334 aa15.36■□□□□ 0.05
SKA1-205ENST00000494518 POLR3DP05423 398 aaPredicted RBP15.36■□□□□ 0.05
SKA1-205ENST00000494518 SHMT1P34896 483 aa15.36■□□□□ 0.05
SKA1-205ENST00000494518 CACNB2Q08289 660 aaPredicted RBP15.36■□□□□ 0.05
SKA1-205ENST00000494518 MAP3K21Q5TCX8 1036 aa15.36■□□□□ 0.05
SKA1-205ENST00000494518 ERC1Q8IUD2 1116 aa15.36■□□□□ 0.05
SKA1-205ENST00000494518 ANKLE1Q8NAG6 615 aa15.36■□□□□ 0.05
SKA1-205ENST00000494518 RHPN1Q8TCX5 695 aa15.36■□□□□ 0.05
SKA1-205ENST00000494518 LRCH3Q96II8 777 aa15.36■□□□□ 0.05
SKA1-205ENST00000494518 RIOK1Q9BRS2 568 aaKnown RBP15.36■□□□□ 0.05
SKA1-205ENST00000494518 EHD4Q9H223 541 aa15.36■□□□□ 0.05
SKA1-205ENST00000494518 C11orf49Q9H6J7 331 aa15.36■□□□□ 0.05
SKA1-205ENST00000494518 DNAH12Q6ZR08 3092 aa15.36■□□□□ 0.05
SKA1-205ENST00000494518 USP17L15C9J2P7 530 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 USP17L13C9JLJ4 530 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 USP17L11C9JVI0 530 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 USP17L18D6R9N7 530 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 USP17L22D6RA61 530 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 USP17L17D6RBQ6 530 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 USP17L19D6RCP7 530 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 USP17L20D6RJB6 530 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 MPHOSPH10O00566 681 aaKnown RBP15.35■□□□□ 0.05
SKA1-205ENST00000494518 PDE6AP16499 860 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 VCAM1P19320 739 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 RGS2P41220 211 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 USP17L24Q0WX57 530 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 MORN1Q5T089 497 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 SLC9C2Q5TAH2 1124 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 TTC6Q86TZ1 520 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 SDR42E1Q8WUS8 393 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 USP6NLQ92738 828 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 EDC3Q96F86 508 aaKnown RBP15.35■□□□□ 0.05
SKA1-205ENST00000494518 C12orf42Q96LP6 360 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 CABP5Q9NP86 173 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 OGDHLQ9ULD0 1010 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 RLFQ13129 1914 aa15.35■□□□□ 0.05
SKA1-205ENST00000494518 COL6A3P12111 3177 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 GOLIM4O00461 696 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 IGSF3O75054 1194 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 CYP2D6P10635 497 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 XRCC5P13010 732 aaKnown RBP15.34■□□□□ 0.05
SKA1-205ENST00000494518 CAPN2P17655 700 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 GUCY1A2P33402 732 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 SEPT2Q15019 361 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 SLFNL1Q499Z3 407 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 CATSPERGQ6ZRH7 1159 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 CERS3Q8IU89 383 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 SLC44A5Q8NCS7 719 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 GTF3C2Q8WUA4 911 aaPredicted RBP15.34■□□□□ 0.05
SKA1-205ENST00000494518 APBA2Q99767 749 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 RPAP3Q9H6T3 665 aaPredicted RBP15.34■□□□□ 0.05
SKA1-205ENST00000494518 BTBD7Q9P203 1132 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 RABGAP1Q9Y3P9 1069 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 PFASO15067 1338 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 ZNF532Q9HCE3 1301 aa15.34■□□□□ 0.05
SKA1-205ENST00000494518 ZNFX1Q9P2E3 1918 aaKnown RBP15.33■□□□□ 0.05
SKA1-205ENST00000494518 USP14P54578 494 aa15.33■□□□□ 0.04
SKA1-205ENST00000494518 LCORLQ8N3X6 602 aa15.33■□□□□ 0.04
SKA1-205ENST00000494518 CRNKL1Q9BZJ0 848 aaKnown RBP15.33■□□□□ 0.04
SKA1-205ENST00000494518 KIAA1683Q9H0B3 1180 aa15.33■□□□□ 0.04
SKA1-205ENST00000494518 MCM9Q9NXL9 1143 aa15.33■□□□□ 0.04
SKA1-205ENST00000494518 FLRT1Q9NZU1 646 aa15.33■□□□□ 0.04
SKA1-205ENST00000494518 COL11A1P12107 1806 aaPredicted RBP15.33■□□□□ 0.04
SKA1-205ENST00000494518 PARP14Q460N5 1801 aa15.33■□□□□ 0.04
SKA1-205ENST00000494518 SPDYE16A6NNV3 312 aaPredicted RBP15.32■□□□□ 0.04
SKA1-205ENST00000494518 MAP2K5Q13163 448 aa15.32■□□□□ 0.04
SKA1-205ENST00000494518 TTF1Q15361 905 aaPredicted RBP15.32■□□□□ 0.04
SKA1-205ENST00000494518 HSP90AB4PQ58FF6 505 aa15.32■□□□□ 0.04
SKA1-205ENST00000494518 CLEC10AQ8IUN9 316 aa15.32■□□□□ 0.04
SKA1-205ENST00000494518 ARMT1Q9H993 441 aa15.32■□□□□ 0.04
SKA1-205ENST00000494518 COG6Q9Y2V7 657 aa15.32■□□□□ 0.04
SKA1-205ENST00000494518 ZBED9Q6R2W3 1325 aa15.32■□□□□ 0.04
SKA1-205ENST00000494518 A0A0G2JMZ2 1700 aa15.31■□□□□ 0.04
SKA1-205ENST00000494518 A0A1W2PRG0 241 aa15.31■□□□□ 0.04
SKA1-205ENST00000494518 CHGBP05060 677 aa15.31■□□□□ 0.04
SKA1-205ENST00000494518 IFIT2P09913 472 aaKnown RBP15.31■□□□□ 0.04
SKA1-205ENST00000494518 MAGEA10P43363 369 aaPredicted RBP15.31■□□□□ 0.04
SKA1-205ENST00000494518 CCNA1P78396 465 aa15.31■□□□□ 0.04
SKA1-205ENST00000494518 GABPAQ06546 454 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms