RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 LTBP4Q8N2S1 1624 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 CCNT1O60563 726 aaKnown RBP10.59□□□□□ -0.71
MINDY4-203ENST00000494187 GDF11O95390 407 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 ZNF76P36508 570 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 NAA30Q147X3 362 aaPredicted RBP10.59□□□□□ -0.71
MINDY4-203ENST00000494187 TTC38Q5R3I4 469 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 KCTD1Q719H9 257 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 MNS1Q8NEH6 495 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 RBM17Q96I25 401 aaKnown RBP10.59□□□□□ -0.71
MINDY4-203ENST00000494187 FBXO3Q9UK99 471 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 CEP131Q9UPN4 1083 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 CTDP1Q9Y5B0 961 aaPredicted RBP10.59□□□□□ -0.71
MINDY4-203ENST00000494187 BCL9O00512 1426 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 ABCC12Q96J65 1359 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 SMTNL1A8MU46 457 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 KLRF2D3W0D1 207 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 RAD17O75943 681 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 TPM1P09493 284 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 ARID4AP29374 1257 aaPredicted RBP10.59□□□□□ -0.71
MINDY4-203ENST00000494187 CLEC17AQ6ZS10 378 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 GJA10Q969M2 543 aa10.59□□□□□ -0.71
MINDY4-203ENST00000494187 BMP2KQ9NSY1 1161 aaPredicted RBP10.59□□□□□ -0.71
MINDY4-203ENST00000494187 EP400Q96L91 3159 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 CHD2O14647 1828 aaKnown RBP10.58□□□□□ -0.72
MINDY4-203ENST00000494187 N4BP3O15049 544 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 CCDC144BQ3MJ40 725 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 ANKRD20A12PQ8NF67 263 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 WDR66Q8TBY9 1149 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 HINFPQ9BQA5 517 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 NBPF3Q9H094 633 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 MMRN2Q9H8L6 949 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 LZTFL1Q9NQ48 299 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 TRPC5Q9UL62 973 aaPredicted RBP10.58□□□□□ -0.72
MINDY4-203ENST00000494187 XRN1Q8IZH2 1706 aaKnown RBP10.58□□□□□ -0.72
MINDY4-203ENST00000494187 TCP10L2B9ZVM9 353 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 OFD1O75665 1012 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 PRR5LQ6MZQ0 368 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 SMARCC2Q8TAQ2 1214 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 DESI2Q9BSY9 194 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 LRRC4BQ9NT99 713 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 DNAI1Q9UI46 699 aa10.58□□□□□ -0.72
MINDY4-203ENST00000494187 FOXP2O15409 715 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 UBXN2AP68543 259 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 FANCCQ00597 558 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 NSUN4Q96CB9 384 aaKnown RBP10.57□□□□□ -0.72
MINDY4-203ENST00000494187 SP4Q02446 784 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 SLC39A14Q15043 492 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 SYT10Q6XYQ8 523 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 SYMPKQ92797 1274 aaKnown RBP10.57□□□□□ -0.72
MINDY4-203ENST00000494187 NUP88Q99567 741 aaPredicted RBP10.57□□□□□ -0.72
MINDY4-203ENST00000494187 RTEL1Q9NZ71 1219 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 ELP1O95163 1332 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 PARP1P09874 1014 aaKnown RBP10.57□□□□□ -0.72
MINDY4-203ENST00000494187 PRR29P0C7W0 189 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 ASIC1P78348 528 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 TXNRD1Q16881 649 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 TSGA10IPQ3SY00 556 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 FILIP1LQ4L180 1135 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 RILPL1Q5EBL4 403 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 PLCD3Q8N3E9 789 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 PLA2G12BQ9BX93 195 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 CD209Q9NNX6 404 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 KCNQ5Q9NR82 932 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 CTNND2Q9UQB3 1225 aa10.57□□□□□ -0.72
MINDY4-203ENST00000494187 SORBS3O60504 671 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 TECP42680 631 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 CACNB1Q02641 598 aaPredicted RBP10.56□□□□□ -0.72
MINDY4-203ENST00000494187 ARID5AQ03989 594 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 PLS1Q14651 629 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 TBC1D10BQ4KMP7 808 aaPredicted RBP10.56□□□□□ -0.72
MINDY4-203ENST00000494187 CLEC4GQ6UXB4 293 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 VGLL2Q8N8G2 317 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 DRC1Q96MC2 740 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 FEZ1Q99689 392 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.56□□□□□ -0.72
MINDY4-203ENST00000494187 CALM1P0DP23 149 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 CALM2P0DP24 149 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 CALM3P0DP25 149 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 POSTNQ15063 836 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 GRIPAP1Q4V328 841 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 MIGA2Q7L4E1 593 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 MAEAQ7L5Y9 396 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 NBPF11Q86T75 865 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 SAMSN1Q9NSI8 373 aaKnown RBP10.56□□□□□ -0.72
MINDY4-203ENST00000494187 ZBTB21Q9ULJ3 1066 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 THRAP3Q9Y2W1 955 aaKnown RBP10.56□□□□□ -0.72
MINDY4-203ENST00000494187 RIOK3O14730 519 aaKnown RBP10.56□□□□□ -0.72
MINDY4-203ENST00000494187 C21orf2O43822 256 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 GSTO1P78417 241 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 SHC4Q6S5L8 630 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 CCDC84Q86UT8 332 aaPredicted RBP10.56□□□□□ -0.72
MINDY4-203ENST00000494187 TRIM47Q96LD4 638 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 GTPBP4Q9BZE4 634 aaKnown RBP10.56□□□□□ -0.72
MINDY4-203ENST00000494187 HOMER2Q9NSB8 354 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 TCP11L1Q9NUJ3 509 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 MAGEC2Q9UBF1 373 aaPredicted RBP10.56□□□□□ -0.72
MINDY4-203ENST00000494187 TCEAL9Q9UHQ7 104 aa10.56□□□□□ -0.72
MINDY4-203ENST00000494187 SMCO2A6NFE2 343 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 CHMP2AO43633 222 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 YEATS4O95619 227 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms