RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 USP40Q9NVE5 1235 aa8.36□□□□□ -1.07
SMARCE1-211ENST00000493660 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.36□□□□□ -1.07
SMARCE1-211ENST00000493660 GREB1LQ9C091 1923 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-211ENST00000493660 ERICH4A6NGS2 130 aa8.35□□□□□ -1.07
SMARCE1-211ENST00000493660 WDHD1O75717 1129 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-211ENST00000493660 EIF6P56537 245 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-211ENST00000493660 RASSF7Q02833 373 aa8.35□□□□□ -1.07
SMARCE1-211ENST00000493660 SART3Q15020 963 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-211ENST00000493660 MAPKAPK5Q8IW41 473 aa8.35□□□□□ -1.07
SMARCE1-211ENST00000493660 OGFOD1Q8N543 542 aa8.35□□□□□ -1.07
SMARCE1-211ENST00000493660 RBSNQ9H1K0 784 aa8.35□□□□□ -1.07
SMARCE1-211ENST00000493660 FAM53CQ9NYF3 392 aa8.35□□□□□ -1.07
SMARCE1-211ENST00000493660 TPCN1Q9ULQ1 816 aa8.35□□□□□ -1.07
SMARCE1-211ENST00000493660 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMARCE1-211ENST00000493660 NID2Q14112 1375 aa8.35□□□□□ -1.07
SMARCE1-211ENST00000493660 SH2B2O14492 632 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 PPP1R12AO14974 1030 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 MAFGO15525 162 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 POLR3DP05423 398 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 USP17L8P0C7I0 530 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 LMNB1P20700 586 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 LIFRP42702 1097 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 RCAN1P53805 252 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 COL9A3Q14050 684 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 ME3Q16798 604 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 TMEM132AQ24JP5 1023 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 CFAP100Q494V2 611 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 CCDC178Q5BJE1 867 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 CYB5R4Q7L1T6 521 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 TTC6Q86TZ1 520 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 TMTC2Q8N394 836 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 DPF2Q92785 391 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 BRF1Q92994 677 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 TCEANC2Q96MN5 208 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 OSBPL5Q9H0X9 879 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 CXorf56Q9H5V9 222 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 ANGEL1Q9UNK9 670 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 TACC3Q9Y6A5 838 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 SPDYE2BA6NHP3 402 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 PFKFB2O60825 505 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 KDM4AO75164 1064 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 ENTPD3O75355 529 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 SPDYE6P0CI01 402 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 RBM5P52756 815 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 ZNF280AP59817 542 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 FKBP1CQ5VVH2 108 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 C16orf86Q6ZW13 317 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 NOL8Q76FK4 1167 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 SGMS1Q86VZ5 419 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 SPRYD3Q8NCJ5 442 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 KIF18AQ8NI77 898 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 EHD4Q9H223 541 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 DHX36Q9H2U1 1008 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 TMOD2Q9NZR1 351 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 ZSWIM5Q9P217 1185 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 SUFUQ9UMX1 484 aa8.34□□□□□ -1.07
SMARCE1-211ENST00000493660 ATRNL1Q5VV63 1379 aa8.34□□□□□ -1.08
SMARCE1-211ENST00000493660 CYP2D7A0A087X1C5 515 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 CCDC189A1A4V9 331 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 ERICH2A1L162 156 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 LARGE1O95461 756 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 CYP2D6P10635 497 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 PRELPP51888 382 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 GSCP56915 257 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 DLGAP5Q15398 846 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 ARHGAP27Q6ZUM4 889 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 IGDCC4Q8TDY8 1250 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 GTF3C6Q969F1 213 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 ZBED3Q96IU2 234 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 LLPHQ9BRT6 129 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 TOMM22Q9NS69 142 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 SWAP70Q9UH65 585 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 DDX49Q9Y6V7 483 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 PLIN4Q96Q06 1357 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 HLA-DOAP06340 250 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 APOBRQ0VD83 1088 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 TMEM67Q5HYA8 995 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 RRP12Q5JTH9 1297 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 SWT1Q5T5J6 900 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 LRCH2Q5VUJ6 765 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 RPAINQ86UA6 219 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 IQCA1Q86XH1 822 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 UBAC1Q9BSL1 405 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 LRRC2Q9BYS8 371 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 LY9Q9HBG7 655 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 DDX4Q9NQI0 724 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 TCP11L1Q9NUJ3 509 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 JRKLQ9Y4A0 524 aa8.33□□□□□ -1.08
SMARCE1-211ENST00000493660 RIOK3O14730 519 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 IFIT3O14879 490 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 ATP2B1P20020 1258 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 PDIA3P30101 505 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 NUCB2P80303 420 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 GABPAQ06546 454 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 WTAPQ15007 396 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 ZSCAN23Q3MJ62 389 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 SPDYE2Q495Y8 402 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 CHST3Q7LGC8 479 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 CCDC83Q8IWF9 413 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 TXLNBQ8N3L3 684 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms