RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 BIN2Q9UBW5 565 aaPredicted RBP13.83□□□□□ -0.2
LRTM1-202ENST00000493075 GJD2Q9UKL4 321 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 SLC4A4Q9Y6R1 1079 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 MYO5AQ9Y4I1 1855 aaKnown RBP13.82□□□□□ -0.2
LRTM1-202ENST00000493075 USP17L12C9JPN9 530 aa13.82□□□□□ -0.2
LRTM1-202ENST00000493075 USP17L21D6R901 530 aa13.82□□□□□ -0.2
LRTM1-202ENST00000493075 RNF113AO15541 343 aaKnown RBP13.82□□□□□ -0.2
LRTM1-202ENST00000493075 CHGBP05060 677 aa13.82□□□□□ -0.2
LRTM1-202ENST00000493075 GJB1P08034 283 aa13.82□□□□□ -0.2
LRTM1-202ENST00000493075 CYP2D6P10635 497 aa13.82□□□□□ -0.2
LRTM1-202ENST00000493075 SEPT2Q15019 361 aa13.82□□□□□ -0.2
LRTM1-202ENST00000493075 GIMAP6Q6P9H5 292 aa13.82□□□□□ -0.2
LRTM1-202ENST00000493075 CATSPERGQ6ZRH7 1159 aa13.82□□□□□ -0.2
LRTM1-202ENST00000493075 TMEM179Q6ZVK1 233 aa13.82□□□□□ -0.2
LRTM1-202ENST00000493075 ACER1Q8TDN7 264 aa13.82□□□□□ -0.2
LRTM1-202ENST00000493075 STRBPQ96SI9 672 aaKnown RBP13.82□□□□□ -0.2
LRTM1-202ENST00000493075 CRBNQ96SW2 442 aa13.82□□□□□ -0.2
LRTM1-202ENST00000493075 FOCADQ5VW36 1801 aa13.82□□□□□ -0.2
LRTM1-202ENST00000493075 GLRX3O76003 335 aaKnown RBP13.81□□□□□ -0.2
LRTM1-202ENST00000493075 MYCP01106 439 aaPredicted RBP13.81□□□□□ -0.2
LRTM1-202ENST00000493075 CCL5P13501 91 aa13.81□□□□□ -0.2
LRTM1-202ENST00000493075 GJA8P48165 433 aa13.81□□□□□ -0.2
LRTM1-202ENST00000493075 CDK8P49336 464 aa13.81□□□□□ -0.2
LRTM1-202ENST00000493075 EVX2Q03828 476 aa13.81□□□□□ -0.2
LRTM1-202ENST00000493075 HDAC1Q13547 482 aaPredicted RBP13.81□□□□□ -0.2
LRTM1-202ENST00000493075 SBK1Q52WX2 424 aa13.81□□□□□ -0.2
LRTM1-202ENST00000493075 CTR9Q6PD62 1173 aa13.81□□□□□ -0.2
LRTM1-202ENST00000493075 LBX2Q6XYB7 198 aa13.81□□□□□ -0.2
LRTM1-202ENST00000493075 C16orf86Q6ZW13 317 aa13.81□□□□□ -0.2
LRTM1-202ENST00000493075 APPBP2Q92624 585 aa13.81□□□□□ -0.2
LRTM1-202ENST00000493075 GCC1Q96CN9 775 aa13.81□□□□□ -0.2
LRTM1-202ENST00000493075 DYNLL2Q96FJ2 89 aa13.81□□□□□ -0.2
LRTM1-202ENST00000493075 RNF208Q9H0X6 261 aa13.81□□□□□ -0.2
LRTM1-202ENST00000493075 TXNRD2Q9NNW7 524 aa13.81□□□□□ -0.2
LRTM1-202ENST00000493075 RABGAP1Q9Y3P9 1069 aa13.81□□□□□ -0.2
LRTM1-202ENST00000493075 MPHOSPH10O00566 681 aaKnown RBP13.8□□□□□ -0.2
LRTM1-202ENST00000493075 VCAM1P19320 739 aa13.8□□□□□ -0.2
LRTM1-202ENST00000493075 MAPK4P31152 587 aa13.8□□□□□ -0.2
LRTM1-202ENST00000493075 ERVK-9P63128 1117 aa13.8□□□□□ -0.2
LRTM1-202ENST00000493075 ERVK-24P63145 666 aa13.8□□□□□ -0.2
LRTM1-202ENST00000493075 Q3C1V9 767 aa13.8□□□□□ -0.2
LRTM1-202ENST00000493075 PI4K2BQ8TCG2 481 aa13.8□□□□□ -0.2
LRTM1-202ENST00000493075 OSBP2Q969R2 916 aa13.8□□□□□ -0.2
LRTM1-202ENST00000493075 ARPP21Q9UBL0 812 aaPredicted RBP13.8□□□□□ -0.2
LRTM1-202ENST00000493075 LOC285556D6RIA3 1793 aa13.8□□□□□ -0.2
LRTM1-202ENST00000493075 CDK5RAP2Q96SN8 1893 aa13.79□□□□□ -0.2
LRTM1-202ENST00000493075 PTPRFP10586 1907 aa13.79□□□□□ -0.2
LRTM1-202ENST00000493075 TNRC18O15417 2968 aaPredicted RBP13.79□□□□□ -0.2
LRTM1-202ENST00000493075 A0A1W2PRG0 241 aa13.79□□□□□ -0.2
LRTM1-202ENST00000493075 GSG1L2A8MUP6 293 aa13.79□□□□□ -0.2
LRTM1-202ENST00000493075 XRCC5P13010 732 aaKnown RBP13.79□□□□□ -0.2
LRTM1-202ENST00000493075 ELNP15502 786 aa13.79□□□□□ -0.2
LRTM1-202ENST00000493075 GNAT2P19087 354 aa13.79□□□□□ -0.2
LRTM1-202ENST00000493075 ZYXQ15942 572 aaKnown RBP13.79□□□□□ -0.2
LRTM1-202ENST00000493075 TSHZ3Q63HK5 1081 aa13.79□□□□□ -0.2
LRTM1-202ENST00000493075 POTEEQ6S8J3 1075 aa13.79□□□□□ -0.2
LRTM1-202ENST00000493075 SIAH1Q8IUQ4 282 aa13.79□□□□□ -0.2
LRTM1-202ENST00000493075 SLC44A5Q8NCS7 719 aa13.79□□□□□ -0.2
LRTM1-202ENST00000493075 YTHDC1Q96MU7 727 aaKnown RBP13.79□□□□□ -0.2
LRTM1-202ENST00000493075 SH2D4AQ9H788 454 aa13.79□□□□□ -0.2
LRTM1-202ENST00000493075 HOXC10Q9NYD6 342 aa13.79□□□□□ -0.2
LRTM1-202ENST00000493075 ZBTB47Q9UFB7 747 aaPredicted RBP13.79□□□□□ -0.2
LRTM1-202ENST00000493075 TMX2Q9Y320 296 aa13.79□□□□□ -0.2
LRTM1-202ENST00000493075 CYP2D7A0A087X1C5 515 aa13.78□□□□□ -0.2
LRTM1-202ENST00000493075 SGPL1O95470 568 aa13.78□□□□□ -0.2
LRTM1-202ENST00000493075 INHAP05111 366 aa13.78□□□□□ -0.2
LRTM1-202ENST00000493075 AKR1B1P15121 316 aa13.78□□□□□ -0.2
LRTM1-202ENST00000493075 MX1P20591 662 aa13.78□□□□□ -0.2
LRTM1-202ENST00000493075 CCNA1P78396 465 aa13.78□□□□□ -0.2
LRTM1-202ENST00000493075 COG2Q14746 738 aa13.78□□□□□ -0.2
LRTM1-202ENST00000493075 ANKRD45Q5TZF3 282 aa13.78□□□□□ -0.2
LRTM1-202ENST00000493075 CCAR1Q8IX12 1150 aaKnown RBP13.78□□□□□ -0.2
LRTM1-202ENST00000493075 SOCS4Q8WXH5 440 aa13.78□□□□□ -0.2
LRTM1-202ENST00000493075 LPAR1Q92633 364 aa13.78□□□□□ -0.2
LRTM1-202ENST00000493075 NUDT12Q9BQG2 462 aa13.78□□□□□ -0.2
LRTM1-202ENST00000493075 UNC93B1Q9H1C4 597 aa13.78□□□□□ -0.2
LRTM1-202ENST00000493075 RPAP3Q9H6T3 665 aaPredicted RBP13.78□□□□□ -0.2
LRTM1-202ENST00000493075 ARHGEF10LQ9HCE6 1279 aa13.78□□□□□ -0.2
LRTM1-202ENST00000493075 SALL3Q9BXA9 1300 aa13.78□□□□□ -0.2
LRTM1-202ENST00000493075 CENPFP49454 3210 aa13.78□□□□□ -0.2
LRTM1-202ENST00000493075 ZSWIM8A7E2V4 1837 aa13.77□□□□□ -0.2
LRTM1-202ENST00000493075 PATL2C9JE40 543 aaKnown RBP13.77□□□□□ -0.21
LRTM1-202ENST00000493075 GPAA1O43292 621 aa13.77□□□□□ -0.21
LRTM1-202ENST00000493075 CNMDO75829 334 aa13.77□□□□□ -0.21
LRTM1-202ENST00000493075 HMGCRP04035 888 aa13.77□□□□□ -0.21
LRTM1-202ENST00000493075 PLEKHH3Q7Z736 793 aa13.77□□□□□ -0.21
LRTM1-202ENST00000493075 TRMT44Q8IYL2 757 aaKnown RBP13.77□□□□□ -0.21
LRTM1-202ENST00000493075 OTUD7AQ8TE49 926 aaPredicted RBP13.77□□□□□ -0.21
LRTM1-202ENST00000493075 U2AF1L4Q8WU68 220 aaKnown RBP13.77□□□□□ -0.21
LRTM1-202ENST00000493075 USP6NLQ92738 828 aa13.77□□□□□ -0.21
LRTM1-202ENST00000493075 SHISA4Q96DD7 197 aa13.77□□□□□ -0.21
LRTM1-202ENST00000493075 PAGR1Q9BTK6 254 aa13.77□□□□□ -0.21
LRTM1-202ENST00000493075 KANSL2Q9H9L4 492 aa13.77□□□□□ -0.21
LRTM1-202ENST00000493075 PAK6Q9NQU5 681 aaPredicted RBP13.77□□□□□ -0.21
LRTM1-202ENST00000493075 STAP2Q9UGK3 403 aa13.77□□□□□ -0.21
LRTM1-202ENST00000493075 ATAD5Q96QE3 1844 aa13.77□□□□□ -0.21
LRTM1-202ENST00000493075 MYH1P12882 1939 aa13.77□□□□□ -0.21
LRTM1-202ENST00000493075 DDX60LQ5H9U9 1706 aaKnown RBP13.76□□□□□ -0.21
LRTM1-202ENST00000493075 SMIM22K7EJ46 135 aa13.76□□□□□ -0.21
LRTM1-202ENST00000493075 PEX10O60683 326 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms