RNA–Protein interactions for RNA: ENST00000492959.1

GTF2E1-204, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 4

Gene GTF2E1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-204ENST00000492959 USP17L19D6RCP7 530 aa13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 USP17L20D6RJB6 530 aa13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 USP17L24Q0WX57 530 aa13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 MKRN4PQ13434 485 aaPredicted RBP13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 SHROOM1Q2M3G4 852 aaPredicted RBP13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 TATDN1Q6P1N9 297 aa13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 GPR142Q7Z601 462 aa13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 ERC1Q8IUD2 1116 aa13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 MAGEB6Q8N7X4 407 aa13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 MIGA1Q8NAN2 632 aa13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 EAF2Q96CJ1 260 aaPredicted RBP13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 C12orf42Q96LP6 360 aa13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 APBA2Q99767 749 aa13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 CCDC8Q9H0W5 538 aaPredicted RBP13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 PORCNQ9H237 461 aa13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 TLR7Q9NYK1 1049 aaKnown RBP13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 RABGAP1Q9Y3P9 1069 aa13.83□□□□□ -0.2
GTF2E1-204ENST00000492959 PEX10O60683 326 aa13.82□□□□□ -0.2
GTF2E1-204ENST00000492959 MNX1P50219 401 aaPredicted RBP13.82□□□□□ -0.2
GTF2E1-204ENST00000492959 CACNB2Q08289 660 aaPredicted RBP13.82□□□□□ -0.2
GTF2E1-204ENST00000492959 Q3C1V9 767 aa13.82□□□□□ -0.2
GTF2E1-204ENST00000492959 CERKLQ49MI3 558 aaPredicted RBP13.82□□□□□ -0.2
GTF2E1-204ENST00000492959 MORN1Q5T089 497 aa13.82□□□□□ -0.2
GTF2E1-204ENST00000492959 GPR153Q6NV75 609 aa13.82□□□□□ -0.2
GTF2E1-204ENST00000492959 USP6NLQ92738 828 aa13.82□□□□□ -0.2
GTF2E1-204ENST00000492959 KIAA1683Q9H0B3 1180 aa13.82□□□□□ -0.2
GTF2E1-204ENST00000492959 CABP5Q9NP86 173 aa13.82□□□□□ -0.2
GTF2E1-204ENST00000492959 ZMYND8Q9ULU4 1186 aaPredicted RBP13.82□□□□□ -0.2
GTF2E1-204ENST00000492959 LAMA3Q16787 3333 aa13.81□□□□□ -0.2
GTF2E1-204ENST00000492959 SOX1O00570 391 aaPredicted RBP13.81□□□□□ -0.2
GTF2E1-204ENST00000492959 MAP2K5Q13163 448 aa13.81□□□□□ -0.2
GTF2E1-204ENST00000492959 RAB3GAP1Q15042 981 aa13.81□□□□□ -0.2
GTF2E1-204ENST00000492959 ZYXQ15942 572 aaKnown RBP13.81□□□□□ -0.2
GTF2E1-204ENST00000492959 ABCB5Q2M3G0 1257 aa13.81□□□□□ -0.2
GTF2E1-204ENST00000492959 TTF1Q15361 905 aaPredicted RBP13.8□□□□□ -0.2
GTF2E1-204ENST00000492959 HSP90AB4PQ58FF6 505 aa13.8□□□□□ -0.2
GTF2E1-204ENST00000492959 WDR78Q5VTH9 848 aa13.8□□□□□ -0.2
GTF2E1-204ENST00000492959 MFSD14CQ5VZR4 134 aa13.8□□□□□ -0.2
GTF2E1-204ENST00000492959 CATSPERGQ6ZRH7 1159 aa13.8□□□□□ -0.2
GTF2E1-204ENST00000492959 AACSQ86V21 672 aa13.8□□□□□ -0.2
GTF2E1-204ENST00000492959 EDC3Q96F86 508 aaKnown RBP13.8□□□□□ -0.2
GTF2E1-204ENST00000492959 LRCH3Q96II8 777 aa13.8□□□□□ -0.2
GTF2E1-204ENST00000492959 IVNS1ABPQ9Y6Y0 642 aa13.8□□□□□ -0.2
GTF2E1-204ENST00000492959 PFASO15067 1338 aa13.8□□□□□ -0.2
GTF2E1-204ENST00000492959 SLC15A5A6NIM6 579 aa13.79□□□□□ -0.2
GTF2E1-204ENST00000492959 POLR3DP05423 398 aaPredicted RBP13.79□□□□□ -0.2
GTF2E1-204ENST00000492959 COL6A1P12109 1028 aa13.79□□□□□ -0.2
GTF2E1-204ENST00000492959 SYN1P17600 705 aa13.79□□□□□ -0.2
GTF2E1-204ENST00000492959 VCAM1P19320 739 aa13.79□□□□□ -0.2
GTF2E1-204ENST00000492959 CCND3P30281 292 aaPredicted RBP13.79□□□□□ -0.2
GTF2E1-204ENST00000492959 MAGEA10P43363 369 aaPredicted RBP13.79□□□□□ -0.2
GTF2E1-204ENST00000492959 CCL14Q16627 93 aa13.79□□□□□ -0.2
GTF2E1-204ENST00000492959 CEP85Q6P2H3 762 aa13.79□□□□□ -0.2
GTF2E1-204ENST00000492959 LBX2Q6XYB7 198 aa13.79□□□□□ -0.2
GTF2E1-204ENST00000492959 TDHQ8IZJ6 230 aa13.79□□□□□ -0.2
GTF2E1-204ENST00000492959 SLC17A8Q8NDX2 589 aa13.79□□□□□ -0.2
GTF2E1-204ENST00000492959 ANTXR1Q9H6X2 564 aa13.79□□□□□ -0.2
GTF2E1-204ENST00000492959 MAGEB6P1A0A0J9YX57 407 aa13.78□□□□□ -0.2
GTF2E1-204ENST00000492959 MSCO60682 206 aa13.78□□□□□ -0.2
GTF2E1-204ENST00000492959 RLBP1P12271 317 aa13.78□□□□□ -0.2
GTF2E1-204ENST00000492959 HNRNPUQ00839 825 aaKnown RBP eCLIP13.78□□□□□ -0.2
GTF2E1-204ENST00000492959 LRIT3Q3SXY7 679 aa13.78□□□□□ -0.2
GTF2E1-204ENST00000492959 LHX8Q68G74 356 aa13.78□□□□□ -0.2
GTF2E1-204ENST00000492959 POTEEQ6S8J3 1075 aa13.78□□□□□ -0.2
GTF2E1-204ENST00000492959 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
GTF2E1-204ENST00000492959 UBE2OQ9C0C9 1292 aaKnown RBP13.78□□□□□ -0.2
GTF2E1-204ENST00000492959 EXOC6BQ9Y2D4 811 aa13.78□□□□□ -0.2
GTF2E1-204ENST00000492959 NDUFB9Q9Y6M9 179 aa13.78□□□□□ -0.2
GTF2E1-204ENST00000492959 CNMDO75829 334 aa13.77□□□□□ -0.21
GTF2E1-204ENST00000492959 HOXC6P09630 235 aa13.77□□□□□ -0.21
GTF2E1-204ENST00000492959 PTPREP23469 700 aa13.77□□□□□ -0.21
GTF2E1-204ENST00000492959 SHMT1P34896 483 aa13.77□□□□□ -0.21
GTF2E1-204ENST00000492959 ATP2B2Q01814 1243 aa13.77□□□□□ -0.21
GTF2E1-204ENST00000492959 ACER1Q8TDN7 264 aa13.77□□□□□ -0.21
GTF2E1-204ENST00000492959 RIOK1Q9BRS2 568 aaKnown RBP13.77□□□□□ -0.21
GTF2E1-204ENST00000492959 RPAP3Q9H6T3 665 aaPredicted RBP13.77□□□□□ -0.21
GTF2E1-204ENST00000492959 NAV1Q8NEY1 1877 aa13.76□□□□□ -0.21
GTF2E1-204ENST00000492959 PLCD1P51178 756 aa13.76□□□□□ -0.21
GTF2E1-204ENST00000492959 GRB14Q14449 540 aa13.76□□□□□ -0.21
GTF2E1-204ENST00000492959 SLC9C2Q5TAH2 1124 aa13.76□□□□□ -0.21
GTF2E1-204ENST00000492959 CLASRPQ8N2M8 674 aaKnown RBP13.76□□□□□ -0.21
GTF2E1-204ENST00000492959 MCM9Q9NXL9 1143 aa13.76□□□□□ -0.21
GTF2E1-204ENST00000492959 HOXC10Q9NYD6 342 aa13.76□□□□□ -0.21
GTF2E1-204ENST00000492959 BTBD7Q9P203 1132 aa13.76□□□□□ -0.21
GTF2E1-204ENST00000492959 DDX20Q9UHI6 824 aaKnown RBP13.76□□□□□ -0.21
GTF2E1-204ENST00000492959 COL6A3P12111 3177 aa13.75□□□□□ -0.21
GTF2E1-204ENST00000492959 SPDYE16A6NNV3 312 aaPredicted RBP13.75□□□□□ -0.21
GTF2E1-204ENST00000492959 MPHOSPH10O00566 681 aaKnown RBP13.75□□□□□ -0.21
GTF2E1-204ENST00000492959 MS4A1P11836 297 aa13.75□□□□□ -0.21
GTF2E1-204ENST00000492959 PDE6AP16499 860 aa13.75□□□□□ -0.21
GTF2E1-204ENST00000492959 CNGA1P29973 690 aa13.75□□□□□ -0.21
GTF2E1-204ENST00000492959 GABPAQ06546 454 aa13.75□□□□□ -0.21
GTF2E1-204ENST00000492959 COG2Q14746 738 aa13.75□□□□□ -0.21
GTF2E1-204ENST00000492959 SEPT2Q15019 361 aa13.75□□□□□ -0.21
GTF2E1-204ENST00000492959 LRRC26Q2I0M4 334 aa13.75□□□□□ -0.21
GTF2E1-204ENST00000492959 DEFB123Q8N688 67 aa13.75□□□□□ -0.21
GTF2E1-204ENST00000492959 RHPN1Q8TCX5 695 aa13.75□□□□□ -0.21
GTF2E1-204ENST00000492959 LPAR1Q92633 364 aa13.75□□□□□ -0.21
GTF2E1-204ENST00000492959 IL1RAPL2Q9NP60 686 aa13.75□□□□□ -0.21
GTF2E1-204ENST00000492959 FRMPD3Q5JV73 1810 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms