RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 PRPF40AO75400 957 aaKnown RBP5.15□□□□□ -1.58
TRA2B-215ENST00000492417 ASNSP08243 561 aa5.15□□□□□ -1.58
TRA2B-215ENST00000492417 SPDYE6P0CI01 402 aa5.15□□□□□ -1.58
TRA2B-215ENST00000492417 RPS12P25398 132 aaKnown RBP5.15□□□□□ -1.58
TRA2B-215ENST00000492417 CALML3P27482 149 aa5.15□□□□□ -1.58
TRA2B-215ENST00000492417 HMGCS2P54868 508 aa5.15□□□□□ -1.58
TRA2B-215ENST00000492417 CCDC73Q6ZRK6 1079 aa5.15□□□□□ -1.58
TRA2B-215ENST00000492417 MOB2Q70IA6 237 aa5.15□□□□□ -1.58
TRA2B-215ENST00000492417 TBC1D10CQ8IV04 446 aa5.15□□□□□ -1.58
TRA2B-215ENST00000492417 GPC2Q8N158 579 aa5.15□□□□□ -1.58
TRA2B-215ENST00000492417 ZNF592Q92610 1267 aa5.15□□□□□ -1.58
TRA2B-215ENST00000492417 CCDC17Q96LX7 622 aa5.15□□□□□ -1.58
TRA2B-215ENST00000492417 KANSL2Q9H9L4 492 aa5.15□□□□□ -1.58
TRA2B-215ENST00000492417 FLT1P17948 1338 aa5.15□□□□□ -1.58
TRA2B-215ENST00000492417 SPDYE3A6NKU9 549 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 KLRF2D3W0D1 207 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 RGL2O15211 777 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 CALM1P0DP23 149 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 CALM2P0DP24 149 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 CALM3P0DP25 149 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 ANAPC15P60006 121 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 HMGN5P82970 282 aaKnown RBP5.15□□□□□ -1.59
TRA2B-215ENST00000492417 HHIPL2Q6UWX4 724 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 VGLL2Q8N8G2 317 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 IL25Q9H293 177 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 MKRN1Q9UHC7 482 aaKnown RBP5.15□□□□□ -1.59
TRA2B-215ENST00000492417 SERPINA10Q9UK55 444 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 ZBTB21Q9ULJ3 1066 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 RTL9Q8NET4 1388 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 ZNF609O15014 1411 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 DDTLA6NHG4 134 aaPredicted RBP5.15□□□□□ -1.59
TRA2B-215ENST00000492417 JAK2O60674 1132 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 IL1R1P14778 569 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 CNGA1P29973 690 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 INPP5BP32019 993 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 PTGER2P43116 358 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 UBXN2AP68543 259 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 ZFPM1Q8IX07 1006 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 GPKOWQ92917 476 aaPredicted RBP eCLIP5.15□□□□□ -1.591e-18■■□□□ 12.2
TRA2B-215ENST00000492417 ZFP91Q96JP5 570 aaPredicted RBP5.15□□□□□ -1.59
TRA2B-215ENST00000492417 KCNJ14Q9UNX9 436 aa5.15□□□□□ -1.59
TRA2B-215ENST00000492417 TRAF5O00463 557 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 TTLL1O95922 423 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 EEF2P13639 858 aaKnown RBP5.14□□□□□ -1.59
TRA2B-215ENST00000492417 LIG1P18858 919 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 NASPP49321 788 aaPredicted RBP5.14□□□□□ -1.59
TRA2B-215ENST00000492417 EEPD1Q7L9B9 569 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 PDILTQ8N807 584 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 CCDC12Q8WUD4 166 aaPredicted RBP5.14□□□□□ -1.59
TRA2B-215ENST00000492417 CHURC1Q8WUH1 139 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 CEP95Q96GE4 821 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 ZNF396Q96N95 335 aaPredicted RBP5.14□□□□□ -1.59
TRA2B-215ENST00000492417 GPRC5DQ9NZD1 345 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 VPS54Q9P1Q0 977 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 SWAP70Q9UH65 585 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 AK9Q5TCS8 1911 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 ASTN2O75129 1339 aaPredicted RBP5.14□□□□□ -1.59
TRA2B-215ENST00000492417 GPR75-ASB3A0A0A6YYF3 556 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 ESPNB1AK53 854 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 TOP1P11387 765 aaKnown RBP5.14□□□□□ -1.59
TRA2B-215ENST00000492417 TPD52L1Q16890 204 aaPredicted RBP5.14□□□□□ -1.59
TRA2B-215ENST00000492417 FAM173BQ6P4H8 233 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 CKAP2LQ8IYA6 745 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 ANKRD35Q8N283 1001 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 FAM151AQ8WW52 585 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 SCLT1Q96NL6 688 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.14□□□□□ -1.59
TRA2B-215ENST00000492417 SUGT1Q9Y2Z0 365 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 COL18A1P39060 1754 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 WDR33Q9C0J8 1336 aaKnown RBP5.14□□□□□ -1.59
TRA2B-215ENST00000492417 GLTPD2A6NH11 291 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 SMIM22K7EJ46 135 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 TRAK2O60296 914 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 CALRP27797 417 aaKnown RBP5.14□□□□□ -1.59
TRA2B-215ENST00000492417 TPM4P67936 248 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 KRT85P78386 507 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 FAM83BQ5T0W9 1011 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 CCAR2Q8N163 923 aaKnown RBP5.14□□□□□ -1.59
TRA2B-215ENST00000492417 SPATA32Q96LK8 384 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 NEDD4P46934 1319 aa5.14□□□□□ -1.59
TRA2B-215ENST00000492417 FAM208AQ9UK61 1670 aaKnown RBP5.14□□□□□ -1.59
TRA2B-215ENST00000492417 USP17L5A8MUK1 530 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 USP17L10C9JJH3 530 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 DDX39AO00148 427 aaKnown RBP5.13□□□□□ -1.59
TRA2B-215ENST00000492417 BMP3P12645 472 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 TXLNAP40222 546 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 MTMR2Q13614 643 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 LETM2Q2VYF4 491 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 C12orf60Q5U649 245 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 FANCBQ8NB91 859 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 GBA2Q9HCG7 927 aaPredicted RBP5.13□□□□□ -1.59
TRA2B-215ENST00000492417 EPB41L4AQ9HCS5 686 aaPredicted RBP5.13□□□□□ -1.59
TRA2B-215ENST00000492417 C6orf50Q9HD87 102 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 CCPG1Q9ULG6 757 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 STX6O43752 255 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 FMNL1O95466 1100 aaPredicted RBP5.13□□□□□ -1.59
TRA2B-215ENST00000492417 VIL1P09327 827 aaKnown RBP5.13□□□□□ -1.59
TRA2B-215ENST00000492417 MARCKSP29966 332 aaPredicted RBP5.13□□□□□ -1.59
TRA2B-215ENST00000492417 ME3Q16798 604 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 TMEM179Q6ZVK1 233 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms